Search Results (6)

From the seven existing species of sea turtles, two are endemic to Mexico and one of these inhabits the Gulf of Mexico and nests mainly in the Rancho Nuevo (RN) Sanctuary, Aldama, Tamaulipas, Mexico [1]. There are other important beaches in Tamaulipas, Mexico, as Tepehuajes (TEP), Barra del Tordo (BdT), Altamira (ALT), y Miramar (MIR) and outside Mexico in South Padre Island (SPI), TX, USA, all locations in the Gulf of Mexico. The objective of this work was to determine the DNA barcode by COI gene sequences in Kemp’s ridley sea turtle (Lepidochelys kempii) and to estimate their genetic divergence. One hundred and one new sequences were obtained from the Kemp’s ridley turtles from the RN sanctuary and compared with the 13 sequences reported in BOLD database [2]. Sequences of nearly 700 bp of Kemp’s ridley were aligned among them and compared to seven different sea turtle species; all new sequences will be added to the BOLD database. Genetic divergence showed a clear separation between other species (0.02 to 0.12), while their relationship with the olive ridley sea turtle (Lepidochelys olivacea) was confirmed (0.02). Additionally, the result of the haplotype network showed five haplotypes, four out of which were novel and only one was the most predominant, it belonged to RN sanctuary, the second one was LK-COI-01 previously reported [3], mostly all sequences were grouped from outside Mexico and only one was from BdT. Finally, the other three ones (twice sequenced) were described for only one sequence each (MIR, ALT, and TEP). Furthermore, the phylogenetic tree showed and confirmed the separation into two main clades, or families, and one out of them, contained the remaining six sea turtle species. Finally, the DNA barcode for Kemp’s ridley was obtained [4]. In conclusion, the main haplotype corresponded to RN Sanctuary as it was expected, and the secondary camps are part of the RN Sanctuary as they are around less than 100 km distant. There was clear evidence that DNA barcode by the COI gene is useful for the study of Kemp’s ridley turtles, being able to discriminate between dominant and new haplotypes from those already reported, as well as study phylogeny and genetic diversity in Kemp’s ridley. Full article

Dihydrodinophysistoxin-1 (dihydro-DTX1, (M-H)⁻m/z 819.5), described previously from a marine sponge but never identified as to its biological source or described in shellfish, was detected in multiple species of commercial shellfish collected from the central coast of the Gulf of Maine, USA in 2016 and in 2018 during blooms of the dinoflagellate Dinophysis norvegica. Toxin screening by protein phosphatase inhibition (PPIA) first detected the presence of diarrhetic shellfish poisoning-like bioactivity; however, confirmatory analysis using liquid chromatography-tandem mass spectrometry (LC-MS/MS) failed to detect okadaic acid (OA, (M-H)⁻m/z 803.5), dinophysistoxin-1 (DTX1, (M-H)⁻m/z 817.5), or dinophysistoxin-2 (DTX2, (M-H)⁻m/z 803.5) in samples collected during the bloom. Bioactivity-guided fractionation followed by liquid chromatography-high resolution mass spectrometry (LC-HRMS) tentatively identified dihydro-DTX1 in the PPIA active fraction. LC-MS/MS measurements showed an absence of OA, DTX1, and DTX2, but confirmed the presence of dihydro-DTX1 in shellfish during blooms of D. norvegica in both years, with results correlating well with PPIA testing. Two laboratory cultures of D. norvegica isolated from the 2018 bloom were found to produce dihydro-DTX1 as the sole DSP toxin, confirming the source of this compound in shellfish. Estimated concentrations of dihydro-DTX1 were >0.16 ppm in multiple shellfish species (max. 1.1 ppm) during the blooms in 2016 and 2018. Assuming an equivalent potency and molar response to DTX1, the authority initiated precautionary shellfish harvesting closures in both years. To date, no illnesses have been associated with the presence of dihydro-DTX1 in shellfish in the Gulf of Maine region and studies are underway to determine the potency of this new toxin relative to the currently regulated DSP toxins in order to develop appropriate management guidance. Full article

Coastal wetlands are productive ecosystems driven by highly dynamic hydrological processes such as tides and river discharge, which operate at daily to seasonal timescales, respectively. The scientific community has been calling for landscape-scale measurements of hydrological variables that could help understand the flow of water and transport of sediment across coastal wetlands. While in situ water level gauge data have enabled significant advances, they are limited in coverage and largely unavailable in many parts of the world. In preparation for the NISAR mission, we investigate the use of spaceborne Interferometric Synthetic Aperture Radar (InSAR) observations of phase and coherence at L-band for landscape-scale monitoring of water level change and vegetation cover in coastal wetlands across seasons. We use L-band SAR images acquired by ALOS/PALSAR from 2007 to 2011 to study the impact of seasonal changes in vegetation cover on InSAR sensitivity to water level change in the wetlands of the Atchafalaya basin located in coastal Louisiana, USA. Seasonal variations are observed in the interferometric coherence ( $\gamma$ ) time-series over wetlands, with higher coherence during the winter and lower coherence during the summer. We show with InSAR time-series that coherence is inversely correlated with Normalized Difference Vegetation Index (NDVI). Our analysis of polarimetric scattering mechanisms demonstrates that double-bounce is the dominant mechanism in swamps while its weakness in marshes hinders estimation of water level changes. In swamps, water level change maps derived from InSAR are highly correlated (r² = 0.83) with in situ data from the Coastwide Reference Monitoring System (CRMS). From October to December, we observed that the water level may be below wetland elevation and thus not inundating wetlands significantly. Our analysis shows that water level can only be retrieved when both images used for InSAR are acquired when wetlands are inundated. The L-band derived-maps of water level change show large scale gradients originating from the Gulf Intracoastal Waterway rather than the main delta trunk channel, confirming its significant role as a source of hydrologic connectivity across these coastal wetlands. These results indicate that NISAR, with its InSAR observations every 12 days, will provide the measurements necessary to reveal large scale hydrodynamic processes that occur in swamps across seasons. Full article

The study investigates the hierarchical uncertainty of multi-ensemble hydroclimate projections for the Southern Hills-Gulf region, USA, considering emission pathways and a global climate model (GCM) as two main sources of uncertainty. Forty projections of downscaled daily air temperature and precipitation from 2010 to 2099 under four emission pathways and ten CMIP5 GCMs are adopted for hydroclimate modeling via the HELP3 hydrologic model. This study focuses on evapotranspiration (ET), surface runoff, and groundwater recharge projections in this century. Climate projection uncertainty is characterized by the hierarchical Bayesian model averaging (HBMA) method, which segregates emission pathway uncertainty and climate model uncertainty. HBMA is able to derive ensemble means and standard deviations, arising from individual uncertainty sources, for ET, runoff, and recharge. The model results show that future recharge in the Southern Hills-Gulf region is more sensitive to different climate projections and exhibits higher variability than ET and runoff. Overall, ET is likely to increase and runoff is likely to decrease in this century given the current emission path scenarios. Runoff are predicted to have an 18% to 20% decrease and ET is predicted to have around a 3% increase throughout the century. Groundwater recharge is likely to increase in this century with a decreasing trend. Recharge would increase about 13% in the early century and will have only a 3% increase in the late century. All hydrological projections have increasing uncertainty towards the end of the century. The HBMA result suggests that the GCM uncertainty dominates the overall hydrological projection uncertainty in the early century and the mid-century. The emission pathway uncertainty becomes important in the late century. Full article

Blue mussels (Mytilus edulis) are ecosystem engineers with strong effects on species diversity and abundances. Mussel beds appear to be declining in the Gulf of Maine, apparently due to climate change and predation by the invasive green crab, Carcinus maenas. As mussels die, they create a legacy of large expanses of shell biogenic structure. In Maine, USA, we used bottom traps to examine effects of four bottom cover types (i.e., live mussels, whole shells, fragmented shells, bare sediment) and wind condition (i.e., days with high, intermediate, and low values) on flow-related ecosystem processes. Significant differences in transport of sediment, meiofauna, and macrofauna were found among cover types and days, with no significant interaction between the two factors. Wind condition had positive effects on transport. Shell hash, especially fragmented shells, had negative effects, possibly because it acted as bed armor to reduce wind-generated erosion and resuspension. Copepods had the greatest mobility and shortest turnover times (0.15 d), followed by nematodes (1.96 d) and the macrofauna dominant, Tubificoides benedeni (2.35 d). Shell legacy effects may play an important role in soft-bottom system responses to wind-generated ecosystem processes, particularly in collapsed mussel beds, with implications for recolonization, connectivity, and the creation and maintenance of spatial pattern. Full article

High-resolution, reliable global atmospheric and oceanic numerical models can represent a key factor in designing a coastal intervention. At the present, two main centers have the capabilities to produce them: the National Oceanic and Atmospheric Administration (NOAA) in the U.S.A. and the European Centre for Medium-Range Weather Forecasts (ECMWF). The NOAA and ECMWF wave models are developed, in particular, for different water regions: deep, intermediate, and shallow water regions using different types of spatial and temporal grids. Recently, in the Arabian Gulf (also named Persian Gulf), the Abu Dhabi Municipality (ADM) installed an ADCP (Acoustic Doppler Current Profiler) to observe the atmospheric and oceanographic conditions (water level, significant wave height, peak wave period, water temperature, and wind speed and direction) at 6 m water depth, in the vicinity of the shoreline of the Saadiyat beach. Courtesy of Abu Dhabi Municipality, this observations dataset is available; the recorded data span the period from June 2015 to January 2018 (included), with a time resolution of 10 min and 30 min for the atmospheric and oceanographic variables, respectively. At the ADCP deployment location (ADMins), the wave climate has been determined using wave propagation of the NOAA offshore wave dataset by means of the Simulating WAves Nearshore (SWAN) numerical model, the NOAA and ECMWF wave datasets at the closest grid point in shallow water conditions, and the SPM ’84 hindcasting method with the NOAA wind dataset used as input. It is shown that the best agreement with the observed wave climate is obtained using the SPM ’84 hindcasting method for the shallow water conditions. Full article