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Keywords = DBEST

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22 pages, 8032 KiB  
Article
Detecting the Greatest Changes in Global Satellite-Based Precipitation Observations
by Majid Kazemzadeh, Hossein Hashemi, Sadegh Jamali, Cintia B. Uvo, Ronny Berndtsson and George J. Huffman
Remote Sens. 2022, 14(21), 5433; https://doi.org/10.3390/rs14215433 - 28 Oct 2022
Cited by 4 | Viewed by 2236
Abstract
In recent years, the analysis of abrupt and non-abrupt changes in precipitation has received much attention due to the importance of climate change-related issues (e.g., extreme climate events). In this study, we used a novel segmentation algorithm, DBEST (Detecting Breakpoints and Estimating Segments [...] Read more.
In recent years, the analysis of abrupt and non-abrupt changes in precipitation has received much attention due to the importance of climate change-related issues (e.g., extreme climate events). In this study, we used a novel segmentation algorithm, DBEST (Detecting Breakpoints and Estimating Segments in Trend), to analyze the greatest changes in precipitation using a monthly pixel-based satellite precipitation dataset (TRMM 3B43) at three different scales: (i) global, (ii) continental, and (iii) climate zone, during the 1998–2019 period. We found significant breakpoints, 14.1%, both in the form of abrupt and non-abrupt changes, in the global scale precipitation at the 0.05 significance level. Most of the abrupt changes were observed near the Equator in the Pacific Ocean and Asian continent, relative to the rest of the globe. Most detected breakpoints occurred during the 1998–1999 and 2009–2011 periods on the global scale. The average precipitation change for the detected breakpoint was ±100 mm, with some regions reaching ±3000 mm. For instance, most portions of northern Africa and Asia experienced major changes of approximately +100 mm. In contrast, most of the South Pacific and South Atlantic Ocean experienced changes of −100 mm during the studied period. Our findings indicated that the larger areas of Africa (23.9%), Asia (22.9%), and Australia (15.4%) experienced significant precipitation breakpoints compared to North America (11.6%), South America (9.3%), Europe (8.3%), and Oceania (9.6%). Furthermore, we found that the majority of detected significant breakpoints occurred in the arid (31.6%) and polar (24.1%) climate zones, while the least significant breakpoints were found for snow-covered (11.5%), equatorial (7.5%), and warm temperate (7.7%) climate zones. Positive breakpoints’ temporal coverage in the arid (54.0%) and equatorial (51.9%) climates were more than those in other climates zones. Here, the findings indicated that large areas of Africa and Asia experienced significant changes in precipitation (−250 to +250 mm). Compared to the average state (trend during a specific period), the greatest changes in precipitation were more abrupt and unpredictable, which might impose a severe threat to the ecology, environment, and natural resources. Full article
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24 pages, 7215 KiB  
Article
Climate vs. Human Impact: Quantitative and Qualitative Assessment of Streamflow Variation
by Hamideh Kazemi, Hossein Hashemi, Fatemeh Fadia Maghsood, Seyyed Hasan Hosseini, Ranjan Sarukkalige, Sadegh Jamali and Ronny Berndtsson
Water 2021, 13(17), 2404; https://doi.org/10.3390/w13172404 - 31 Aug 2021
Cited by 11 | Viewed by 3770
Abstract
This paper presents a novel framework comprising analytical, hydrological, and remote sensing techniques to separate the impacts of climate variation and regional human activities on streamflow changes in the Karkheh River basin (KRB) of western Iran. To investigate the type of streamflow changes, [...] Read more.
This paper presents a novel framework comprising analytical, hydrological, and remote sensing techniques to separate the impacts of climate variation and regional human activities on streamflow changes in the Karkheh River basin (KRB) of western Iran. To investigate the type of streamflow changes, the recently developed DBEST algorithm was used to provide a better view of the underlying reasons. The Budyko method and the HBV model were used to investigate the decreasing streamflow, and DBEST detected a non-abrupt change in the streamflow trend, indicating the impacts of human activity in the region. Remote sensing analysis confirmed this finding by distinguishing land-use change in the region. The algorithm found an abrupt change in precipitation, reflecting the impacts of climate variation on streamflow. The final assessment showed that the observed streamflow reduction is associated with both climate variation and human influence. The combination of increased irrigated area (from 9 to 19% of the total basin area), reduction of forests (from 11 to 3%), and decreasing annual precipitation has substantially reduced the streamflow rate in the basin. The developed framework can be implemented in other regions to thoroughly investigate human vs. climate impacts on the hydrological cycle, particularly where data availability is a challenge. Full article
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17 pages, 5240 KiB  
Article
Multi-Year Mapping of Disturbance and Reclamation Patterns over Tronox’s Hillendale Mine, South Africa with DBEST and Google Earth Engine
by Sifiso Xulu, Philani T. Phungula, Nkanyiso Mbatha and Inocent Moyo
Land 2021, 10(7), 760; https://doi.org/10.3390/land10070760 - 19 Jul 2021
Cited by 15 | Viewed by 5103
Abstract
This study was devised to examine the pattern of disturbance and reclamation by Tronox, which instigated a closure process for its Hillendale mine site in South Africa, where they recovered zirconium- and titanium-bearing minerals from 2001 to 2013. Restoring mined-out areas is of [...] Read more.
This study was devised to examine the pattern of disturbance and reclamation by Tronox, which instigated a closure process for its Hillendale mine site in South Africa, where they recovered zirconium- and titanium-bearing minerals from 2001 to 2013. Restoring mined-out areas is of great importance in South Africa, with its ominous record of almost 6000 abandoned mines since the 1860s. In 2002, the government enacted the Mineral and Petroleum Resources Development Act (No. 28 of 2002) to enforce extracting companies to restore mined-out areas before pursuing closure permits. Thus, the trajectory of the Hillendale mine remains unstudied despite advances in the satellite remote sensing technology that is widely used in this field. Here, we retrieved a collection of Landsat-derived normalized difference vegetation index (NDVI) within the Google Earth Engine and applied the Detecting Breakpoints and Estimating Segments in Trend (DBEST) algorithm to examine the progress of vegetation transformation over the Hillendale mine between 2001 and 2019. Our results showed key breakpoints in NDVI, a drop from 2001, reaching the lowest point in 2009–2011, with a marked recovery pattern after 2013 when the restoration program started. We also validated our results using a random forests strategy that separated vegetated and non-vegetated areas with an accuracy exceeding 78%. Overall, our findings are expected to encourage users to replicate this affordable application, particularly in emerging countries with similar cases. Full article
(This article belongs to the Special Issue Managing and Restoring of Degraded Land in Post-mining Areas)
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25 pages, 6557 KiB  
Article
Change Points Detected in Decadal and Seasonal Trends of Outlet Glacier Terminus Positions across West Greenland
by Ashley V. York, Karen E. Frey, Sadegh Jamali and Sarah B. Das
Remote Sens. 2020, 12(21), 3651; https://doi.org/10.3390/rs12213651 - 7 Nov 2020
Cited by 3 | Viewed by 3774
Abstract
We investigated the change in terminus position between 1985 and 2015 of 17 marine-terminating glaciers that drain into Disko and Uummannaq Bays, West Greenland, by manually digitizing over 5000 individual frontal positions from over 1200 Landsat images. We find that 15 of 17 [...] Read more.
We investigated the change in terminus position between 1985 and 2015 of 17 marine-terminating glaciers that drain into Disko and Uummannaq Bays, West Greenland, by manually digitizing over 5000 individual frontal positions from over 1200 Landsat images. We find that 15 of 17 glacier termini retreated over the study period, with ~80% of this retreat occurring since 2000. Increased frequency of Landsat observations since 2000 allowed for further investigation of the seasonal variability in terminus position. We identified 10 actively retreating glaciers based on a significant positive relationship between glaciers with cumulative retreat >300 m since 2000 and their average annual amplitude (seasonal range) in terminus position. Finally, using the Detecting Breakpoints and Estimating Segments in Trend (DBEST) program, we investigated whether the 2000–2015 trends in terminus position were explained by the occurrence of change points (significant trend transitions). Based on the change point analysis, we found that nine of 10 glaciers identified as actively retreating also underwent two or three periods of change, during which their terminus positions were characterized by increases in cumulative retreat. Previous literature suggests potential relationships between our identified change dates with anomalous ocean conditions, such as low sea ice concentration and high sea surface temperatures, and our change durations with individual fjord geometry. Full article
(This article belongs to the Special Issue Applications of Remote Sensing in Glaciology)
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18 pages, 3915 KiB  
Article
Global-Scale Patterns and Trends in Tropospheric NO2 Concentrations, 2005–2018
by Sadegh Jamali, Daniel Klingmyr and Torbern Tagesson
Remote Sens. 2020, 12(21), 3526; https://doi.org/10.3390/rs12213526 - 28 Oct 2020
Cited by 35 | Viewed by 4819
Abstract
Nitrogen dioxide (NO2) is an important air pollutant with both environmental and epidemiological effects. The main aim of this study is to analyze spatial patterns and temporal trends in tropospheric NO2 concentrations globally using data from the satellite-based Ozone Monitoring [...] Read more.
Nitrogen dioxide (NO2) is an important air pollutant with both environmental and epidemiological effects. The main aim of this study is to analyze spatial patterns and temporal trends in tropospheric NO2 concentrations globally using data from the satellite-based Ozone Monitoring Instrument (OMI). Additional aims are to compare the satellite data with ground-based observations, and to find the timing and magnitude of greatest breakpoints in tropospheric NO2 concentrations for the time period 2005–2018. The OMI NO2 concentrations showed strong relationships with the ground-based observations, and inter-annual patterns were especially well reproduced. Eastern USA, Western Europe, India, China and Japan were identified as hotspot areas with high concentrations of NO2. The global average trend indicated slightly increasing NO2 concentrations (0.004 × 1015 molecules cm−2 y−1) in 2005–2018. The contribution of different regions to this global trend showed substantial regional differences. Negative trends were observed for most of Eastern USA, Western Europe, Japan and for parts of China, whereas strong, positive trends were seen in India, parts of China and in the Middle East. The years 2005 and 2007 had the highest occurrence of negative breakpoints, but the trends thereafter in general reversed, and the highest tropospheric NO2 concentrations were observed for the years 2017–2018. This indicates that the anthropogenic contribution to air pollution is still a major issue and that further actions are necessary to reduce this contribution, having a substantial impact on human and environmental health. Full article
(This article belongs to the Special Issue Air Quality Research Using Remote Sensing)
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18 pages, 711 KiB  
Article
Generation and Analysis of Expressed Sequence Tags (ESTs) from Halophyte Atriplex canescens to Explore Salt-Responsive Related Genes
by Jingtao Li, Xinhua Sun, Gang Yu, Chengguo Jia, Jinliang Liu and Hongyu Pan
Int. J. Mol. Sci. 2014, 15(6), 11172-11189; https://doi.org/10.3390/ijms150611172 - 23 Jun 2014
Cited by 15 | Viewed by 6711
Abstract
Little information is available on gene expression profiling of halophyte A. canescens. To elucidate the molecular mechanism for stress tolerance in A. canescens, a full-length complementary DNA library was generated from A. canescens exposed to 400 mM NaCl, and provided 343 [...] Read more.
Little information is available on gene expression profiling of halophyte A. canescens. To elucidate the molecular mechanism for stress tolerance in A. canescens, a full-length complementary DNA library was generated from A. canescens exposed to 400 mM NaCl, and provided 343 high-quality ESTs. In an evaluation of 343 valid EST sequences in the cDNA library, 197 unigenes were assembled, among which 190 unigenes (83.1% ESTs) were identified according to their significant similarities with proteins of known functions. All the 343 EST sequences have been deposited in the dbEST GenBank under accession numbers JZ535802 to JZ536144. According to Arabidopsis MIPS functional category and GO classifications, we identified 193 unigenes of the 311 annotations EST, representing 72 non-redundant unigenes sharing similarities with genes related to the defense response. The sets of ESTs obtained provide a rich genetic resource and 17 up-regulated genes related to salt stress resistance were identified by qRT-PCR. Six of these genes may contribute crucially to earlier and later stage salt stress resistance. Additionally, among the 343 unigenes sequences, 22 simple sequence repeats (SSRs) were also identified contributing to the study of A. canescens resources. Full article
(This article belongs to the Special Issue Metagenomics: a Powerful Lens Viewing the Microbial World)
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15 pages, 270 KiB  
Article
Flavonoid Biosynthesis Genes Putatively Identified in the Aromatic Plant Polygonum minus via Expressed Sequences Tag (EST) Analysis
by Nur Diyana Roslan, Jastina Mat Yusop, Syarul Nataqain Baharum, Roohaida Othman, Zeti-Azura Mohamed-Hussein, Ismanizan Ismail, Normah Mohd Noor and Zamri Zainal
Int. J. Mol. Sci. 2012, 13(3), 2692-2706; https://doi.org/10.3390/ijms13032692 - 28 Feb 2012
Cited by 24 | Viewed by 8344
Abstract
P. minus is an aromatic plant, the leaf of which is widely used as a food additive and in the perfume industry. The leaf also accumulates secondary metabolites that act as active ingredients such as flavonoid. Due to limited genomic and transcriptomic data, [...] Read more.
P. minus is an aromatic plant, the leaf of which is widely used as a food additive and in the perfume industry. The leaf also accumulates secondary metabolites that act as active ingredients such as flavonoid. Due to limited genomic and transcriptomic data, the biosynthetic pathway of flavonoids is currently unclear. Identification of candidate genes involved in the flavonoid biosynthetic pathway will significantly contribute to understanding the biosynthesis of active compounds. We have constructed a standard cDNA library from P. minus leaves, and two normalized full-length enriched cDNA libraries were constructed from stem and root organs in order to create a gene resource for the biosynthesis of secondary metabolites, especially flavonoid biosynthesis. Thus, large‑scale sequencing of P. minus cDNA libraries identified 4196 expressed sequences tags (ESTs) which were deposited in dbEST in the National Center of Biotechnology Information (NCBI). From the three constructed cDNA libraries, 11 ESTs encoding seven genes were mapped to the flavonoid biosynthetic pathway. Finally, three flavonoid biosynthetic pathway-related ESTs chalcone synthase, CHS (JG745304), flavonol synthase, FLS (JG705819) and leucoanthocyanidin dioxygenase, LDOX (JG745247) were selected for further examination by quantitative RT-PCR (qRT-PCR) in different P. minus organs. Expression was detected in leaf, stem and root. Gene expression studies have been initiated in order to better understand the underlying physiological processes. Full article
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