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Keywords = σ/π aromaticity

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20 pages, 4561 KiB  
Article
Unmodified Hemp Biowaste as a Sustainable Biosorbent for Congo Red and Remazol Brilliant Blue R
by Ljiljana Suručić, Deana Andrić, Ivana Jevtić, Milan Momčilović, Relja Suručić and Jelena Penjišević
Coatings 2025, 15(5), 519; https://doi.org/10.3390/coatings15050519 - 26 Apr 2025
Viewed by 1153
Abstract
Industrial hemp (Cannabis sativa L.) was investigated as a sustainable biosorbent for removing Congo Red (CR) and Remazol Brilliant Blue R (RBBR) from wastewater. The unmodified hemp biosorbent exhibited moderate but practically relevant sorption capacities (4.47 mg/g for CR; 2.44 mg/g for [...] Read more.
Industrial hemp (Cannabis sativa L.) was investigated as a sustainable biosorbent for removing Congo Red (CR) and Remazol Brilliant Blue R (RBBR) from wastewater. The unmodified hemp biosorbent exhibited moderate but practically relevant sorption capacities (4.47 mg/g for CR; 2.44 mg/g for RBBR), outperforming several agricultural waste materials. Kinetic studies revealed rapid uptake, with CR following pseudo-first-order kinetics (t1/2 < 15 min) and RBBR fitting the Elovich model, indicating heterogeneous surface interactions. Equilibrium data showed CR adsorption was best described by the Temkin isotherm (R2 = 0.983), while RBBR followed the Langmuir model (R2 = 0.998), reflecting their distinct binding mechanisms. Thermodynamic analysis confirmed spontaneous (ΔG° < 0), exothermic (ΔH° ≈ −2 kJ/mol), and entropy-driven processes for both dyes. Molecular docking elucidated the structural basis for performance differences: CR’s stronger binding (−7.5 kcal/mol) involved weak noncovalent interaction arising from partial overlap between the π-electron cloud of an aromatic ring and σ-bonds C-C or C-H (π-σ stacking) and hydrogen bonds with cellulose, whereas RBBR’s weaker affinity (−5.4 kcal/mol) relied on weak intermolecular interaction between a hydrogen atom (from a C-H bond) and the π-electron system of an aromatic ring (C-H∙∙∙π interactions). This work establishes industrial hemp as an eco-friendly alternative for dye removal, combining renewable sourcing with multi-mechanism adsorption capabilities suitable for small-scale water treatment applications. Full article
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11 pages, 2523 KiB  
Article
Chemical Bonding and Dynamic Structural Fluxionality of a Boron-Based B8Al3+ Cluster
by Shu-Juan Gao and Tan-Lai Yu
Molecules 2024, 29(24), 5961; https://doi.org/10.3390/molecules29245961 - 17 Dec 2024
Viewed by 850
Abstract
We studied the boron-based composite cluster B8Al3+ doped with Al atoms. The global minimum structure of the B8Al3+ cluster is a three-layer structure, consisting of three parts: an Al2 unit, a B8 ring [...] Read more.
We studied the boron-based composite cluster B8Al3+ doped with Al atoms. The global minimum structure of the B8Al3+ cluster is a three-layer structure, consisting of three parts: an Al2 unit, a B8 ring and an isolated Al atom. Charge calculations analysis shows that the cluster can be expressed as [Al]+[B8]2−[Al2]2+, has 6π/6σ double aromaticity and follows the (4n+2) Hückel rule. Born–Oppenheimer molecular dynamics (BOMD) simulation shows that the B8Al3+ cluster has dynamic fluxionality properties. Remarkably, at the single-point coupled cluster singles, doubles and triples (CCSD(T)) level, the energy barrier for intramolecular rotation is merely 0.19 kcal mol−1. [B8]2− molecular wheels have magical 6π/6σ double aromaticity properties, providing a continuous cloud of delocalized electrons, which is a key factor in the dynamic fluxionality of the cluster. The B8Al3+ cluster provides a new example of dynamic structural fluxionality in molecular systems. Full article
(This article belongs to the Section Computational and Theoretical Chemistry)
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12 pages, 4452 KiB  
Article
Theoretical Prediction of Divalent Actinide Borozene Complexes
by Naixin Zhang, Qunyan Wu, Jianhui Lan, Weiqun Shi and Congzhi Wang
Molecules 2024, 29(23), 5815; https://doi.org/10.3390/molecules29235815 - 9 Dec 2024
Cited by 1 | Viewed by 995
Abstract
The aromatic boron cluster B82– (D7h) has similar π bonding to C6H6, which is named “borozene”. The B82– ligand has been observed to stabilize monovalent Ln(+I) in C7v-LnB [...] Read more.
The aromatic boron cluster B82– (D7h) has similar π bonding to C6H6, which is named “borozene”. The B82– ligand has been observed to stabilize monovalent Ln(+I) in C7v-LnB8 (Ln = La, Pr, Tb, Tm, and Yb) borozene complexes. Low-valency actinide complexes have been reported more rarely, and B82– may be one of the potential ligands. Here, we report a theoretical study on a series of actinide metal-doping octa-boron clusters AnB8 (An = Pa, U, Np, and Pu). It was found that each species has both half-sandwich and chair-like structures. Except for PaB8, the half-sandwich structures of UB8, NpB8, and PuB8 are more energetically stable than the chair-like structures, and the half-sandwich clusters of AnB8 are found to be actinide(II) borozene complexes with the MII[B82−] type. For each of the half-sandwich clusters, the B82− ligand has σ and π double aromaticity. Various bonding analyses of AnB8 confirm the covalent interactions between the doped actinide metals and the octa-boron clusters, which further stabilize the complexes and determine the relative stability of AnB8. As expected, these complexes show high bond dissociation energies, especially PaB8 with stronger Pa-B covalent bonds. These results demonstrate that the B82− doubly aromatic ligand is able to stabilize divalent actinides. Full article
(This article belongs to the Special Issue Exclusive Feature Papers in Physical Chemistry, 2nd Edition)
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15 pages, 2340 KiB  
Article
Using Hybrid PDI-Fe3O4 Nanoparticles for Capturing Aliphatic Alcohols: Halogen Bonding vs. Lone Pair–π Interactions
by María de las Nieves Piña, Alberto León, Antonio Frontera, Jeroni Morey and Antonio Bauzá
Int. J. Mol. Sci. 2024, 25(12), 6436; https://doi.org/10.3390/ijms25126436 - 11 Jun 2024
Viewed by 1035
Abstract
In this study, Fe3O4 nanoparticles (FeNPs) decorated with halogenated perylene diimides (PDIs) have been used for capturing VOCs (volatile organic compounds) through noncovalent binding. Concretely, we have used tetrachlorinated/brominated PDIs as well as a nonhalogenated PDI as a reference system. [...] Read more.
In this study, Fe3O4 nanoparticles (FeNPs) decorated with halogenated perylene diimides (PDIs) have been used for capturing VOCs (volatile organic compounds) through noncovalent binding. Concretely, we have used tetrachlorinated/brominated PDIs as well as a nonhalogenated PDI as a reference system. On the other hand, methanol, ethanol, propanol, and butanol were used as VOCs. Experimental studies along with theoretical calculations (the BP86-D3/def2-TZVPP level of theory) pointed to two possible and likely competitive binding modes (lone pair–π through the π-acidic surface of the PDI and a halogen bond via the σ-holes at the Cl/Br atoms). More in detail, thermal desorption (TD) experiments showed an increase in the VOC retention capacity upon increasing the length of the alkyl chain, suggesting a preference for the interaction with the PDI aromatic surface. In addition, the tetrachlorinated derivative showed larger VOC retention times compared to the tetrabrominated analog. These results were complemented by several state-of-the-art computational tools, such as the electrostatic surface potential analysis, the Quantum Theory of Atoms in Molecules (QTAIM), as well as the noncovalent interaction plot (NCIplot) visual index, which were helpful to rationalize the role of each interaction in the VOC···PDI recognition phenomena. Full article
(This article belongs to the Collection Feature Papers in Molecular Nanoscience)
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13 pages, 4846 KiB  
Article
XB2Bi2 (X = Si, Ge, Sn, Pb): Penta-Atomic Planar Tetracoordinate Si/Ge/Sn/Pb Clusters with 20 Valence Electrons
by Yan-Xia Jin and Jin-Chang Guo
Int. J. Mol. Sci. 2024, 25(5), 2819; https://doi.org/10.3390/ijms25052819 - 29 Feb 2024
Viewed by 1326
Abstract
Planar tetracoordinate silicon, germanium, tin, and lead (ptSi/Ge/Sn/Pb) species are scarce and exotic. Here, we report a series of penta-atomic ptSi/Ge/Sn/Pb XB2Bi2 (X = Si, Ge, Sn, Pb) clusters with 20 valence electrons (VEs). Ternary XB2Bi2 (X [...] Read more.
Planar tetracoordinate silicon, germanium, tin, and lead (ptSi/Ge/Sn/Pb) species are scarce and exotic. Here, we report a series of penta-atomic ptSi/Ge/Sn/Pb XB2Bi2 (X = Si, Ge, Sn, Pb) clusters with 20 valence electrons (VEs). Ternary XB2Bi2 (X = Si, Ge, Sn, Pb) clusters possess beautiful fan-shaped structures, with a Bi–B–B–Bi chain surrounding the central X core. The unbiased density functional theory (DFT) searches and high-level CCSD(T) calculations reveal that these ptSi/Ge/Sn/Pb species are the global minima on their potential energy surfaces. Born–Oppenheimer molecular dynamics (BOMD) simulations indicate that XB2Bi2 (X = Si, Ge, Sn, Pb) clusters are robust. Bonding analyses indicate that 20 VEs are perfect for the ptX XB2Bi2 (X = Si, Ge, Sn, Pb): two lone pairs of Bi atoms; one 5c–2e π, and three σ bonds (two Bi–X 2c–2e and one B–X–B 3c–2e bonds) between the ligands and X atom; three 2c–2e σ bonds and one delocalized 4c–2e π bond between the ligands. The ptSi/Ge/Sn/Pb XB2Bi2 (X = Si, Ge, Sn, Pb) clusters possess 2π/2σ double aromaticity, according to the (4n + 2) Hückel rule. Full article
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40 pages, 14175 KiB  
Review
Advances for Triangular and Sandwich-Shaped All-Metal Aromatics
by Miaomiao Wang and Yanlan Wang
Molecules 2024, 29(4), 763; https://doi.org/10.3390/molecules29040763 - 7 Feb 2024
Cited by 7 | Viewed by 2233
Abstract
Much experimental work has been contributed to all-metal σ, π and δ-aromaticity among transition metals, semimetallics and other metals in the past two decades. Before our focused investigations on the properties of triangular and sandwich-shaped all-metal aromatics, A. I. Boldyrev presented general [...] Read more.
Much experimental work has been contributed to all-metal σ, π and δ-aromaticity among transition metals, semimetallics and other metals in the past two decades. Before our focused investigations on the properties of triangular and sandwich-shaped all-metal aromatics, A. I. Boldyrev presented general discussions on the concepts of all-metal σ-aromaticity and σ-antiaromaticity for metallo-clusters. Schleyer illustrated that Nucleus-Independent Chemical Shifts (NICS) were among the most authoritative criteria for aromaticity. Ugalde discussed the earlier developments of all-metal aromatic compounds with all possible shapes. Besides the theoretical predictions, many stable all-metal aromatic trinuclear clusters have been isolated as the metallic analogues of either the σ-aromatic molecule’s [H3]+ ion or the π-aromatic molecule’s [C3H3]+ ion. Different from Hoffman’s opinion on all-metal aromaticity, triangular all-metal aromatics were found to hold great potential in applications in coordination chemistry, catalysis, and material science. Triangular all-metal aromatics, which were theoretically proved to conform to the Hückel (4n + 2) rule and possess the smallest aromatic ring, could also play roles as stable ligands during the formation of all-metal sandwiches. The triangular and sandwich-shaped all-metal aromatics have not yet been specifically summarized despite their diversity of existence, puissant developments and various interesting applications. These findings are different from the public opinion that all-metal aromatics would be limited to further applications due to their overstated difficulties in synthesis and uncertain stabilities. Our review will specifically focus on the summarization of theoretical predictions, feasible syntheses and isolations, and multiple applications of triangular and sandwich shaped all-metal aromatics. The appropriateness and necessities of this review will emphasize and disseminate their importance and applications forcefully and in a timely manner. Full article
(This article belongs to the Special Issue Recent Advances in Coordination Chemistry of Metal Complexes)
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11 pages, 2247 KiB  
Article
Search for Osme Bonds with π Systems as Electron Donors
by Xin Wang, Qingzhong Li and Steve Scheiner
Molecules 2024, 29(1), 79; https://doi.org/10.3390/molecules29010079 - 22 Dec 2023
Cited by 6 | Viewed by 1458
Abstract
The Osme bond is defined as pairing a Group 8 metal atom as an electron acceptor in a noncovalent interaction with a nucleophile. DFT calculations with the ωB97XD functional consider MO4 (M = Ru, Os) as the Lewis acid, paired with a [...] Read more.
The Osme bond is defined as pairing a Group 8 metal atom as an electron acceptor in a noncovalent interaction with a nucleophile. DFT calculations with the ωB97XD functional consider MO4 (M = Ru, Os) as the Lewis acid, paired with a series of π electron donors C2H2, C2H4, C6H6, C4H5N, C4H4O, and C4H4S. The calculations establish interaction energies in the range between 9.5 and 26.4 kJ/mol. Os engages in stronger interactions than does Ru, and those involving more extensive π-systems within the aromatic rings form stronger bonds than do the smaller ethylene and acetylene. Extensive analysis questions the existence of a true Osme bond, as the bonding chiefly involves interactions with the three O atoms of MO4 that lie closest to the π-system, via π(C-C)→σ*(M-O) transfers. These interactions are supplemented by back donation from M-O bonds to the π*(CC) antibonding orbitals of the π-systems. Dispersion makes a large contribution to these interactions, higher than electrostatics and much greater than induction. Full article
(This article belongs to the Section Molecular Structure)
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11 pages, 3419 KiB  
Article
The Structures and Bonding of Bismuth-Doped Boron Clusters: BiB4 and BiB5
by Hyun Wook Choi, Wei-Jia Chen, G. Stephen Kocheril, Dao-Fu Yuan and Lai-Sheng Wang
Inorganics 2023, 11(10), 405; https://doi.org/10.3390/inorganics11100405 - 14 Oct 2023
Cited by 2 | Viewed by 2429
Abstract
We present an investigation on the structures and chemical bonding of two Bi-doped boron clusters BiBn (n = 4, 5) using photoelectron spectroscopy and theoretical calculations. The electron affinities of BiB4 and BiB5 are measured to be 2.22(2) [...] Read more.
We present an investigation on the structures and chemical bonding of two Bi-doped boron clusters BiBn (n = 4, 5) using photoelectron spectroscopy and theoretical calculations. The electron affinities of BiB4 and BiB5 are measured to be 2.22(2) eV and 2.61(2) eV, respectively. Well-resolved photoelectron spectra are obtained and used to compare with theoretical calculations to verify the structures of BiB4 and BiB5. Both clusters adopt planar structures with the Bi atom bonded to the periphery of the planar Bn moiety. Chemical bonding analyses reveal that the Bn moiety maintains σ and π double-aromaticity. The Bi atom is found to induce relatively small structural changes to the Bn moiety, very different from transition metal-doped boron clusters. Full article
(This article belongs to the Special Issue Boron Chemistry: Fundamentals and Applications)
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12 pages, 3030 KiB  
Article
Ternary XBe4H5 (X = Si, Ge, Sn, Pb) Clusters: Planar Tetracoordinate Si/Ge/Sn/Pb Species with 18 Valence Electrons
by Yong-Xia Li, Li-Xia Bai and Jin-Chang Guo
Molecules 2023, 28(14), 5583; https://doi.org/10.3390/molecules28145583 - 22 Jul 2023
Cited by 4 | Viewed by 1830
Abstract
As one of the important probes of chemical bonding, planar tetracoordinate carbon (ptC) compounds have been receiving much attention. Compared with ptC clusters, the heavier planar tetracoordinate silicon, germanium, tin, lead (ptSi/Ge/Sn/Pb) systems are scarcer and more exotic. The 18-valence-electron (ve)-counting is one [...] Read more.
As one of the important probes of chemical bonding, planar tetracoordinate carbon (ptC) compounds have been receiving much attention. Compared with ptC clusters, the heavier planar tetracoordinate silicon, germanium, tin, lead (ptSi/Ge/Sn/Pb) systems are scarcer and more exotic. The 18-valence-electron (ve)-counting is one important guide, though not the only rule, for the design of planar tetra-, penta-coordinate carbon and silicon clusters. The 18ve ptSi/Ge system is very scarce and needs to be expanded. Based on the isoelectronic principle and bonding similarity between the Al atom and the BeH unit, inspired by the previously reported ptSi global minimum (GM) SiAl42−, a series of ternary 18 ve XBe4H5 (X = Si, Ge, Sn, Pb) clusters were predicted with the ptSi/Ge/Sn/Pb centers. Extensive density functional theory (DFT) global minimum searches and high-level CCSD(T) calculations performed herein indicated that these ptSi/Ge/Sn/Pb XBe4H5 (X = Si, Ge, Sn, Pb) clusters were all true GMs on their potential energy surfaces. These GMs of XBe4H5 (X = Si, Ge, Sn, Pb) species possessed the beautiful fan-shaped structures: XBe4 unit can be stabilized by three peripheries bridging H and two terminal H atoms. It should be noted that XBe4H5 (X = Si, Ge, Sn, Pb) were the first ternary 18 ve ptSi/Ge/Sn/Pb species. The natural bond orbital (NBO), canonical molecular orbitals (CMOs) and adaptive natural densitpartitioning (AdNDP) analyses indicated that 18ve are ideal for these ptX clusters: delocalized one π and three σ bonds for the XBe4 core, three Be-H-Be 3c-2e and two Be-H σ bonds for the periphery. Additionally, 2π plus 6σ double aromaticity was found to be crucial for the stability of the ptX XBe4H5 (X = Si, Ge, Sn, Pb) clusters. The simulated photoelectron spectra of XBe4H5 (X = Si, Ge, Sn, Pb) clusters will provide theoretical basis for further experimental characterization. Full article
(This article belongs to the Section Inorganic Chemistry)
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15 pages, 4072 KiB  
Article
Boron-Based Inverse Sandwich V2B7 Cluster: Double π/σ Aromaticity, Metal–Metal Bonding, and Chemical Analogy to Planar Hypercoordinate Molecular Wheels
by Peng-Fei Han, Qiang Sun and Hua-Jin Zhai
Molecules 2023, 28(12), 4721; https://doi.org/10.3390/molecules28124721 - 12 Jun 2023
Cited by 7 | Viewed by 1903
Abstract
Inverse sandwich clusters composed of a monocyclic boron ring and two capping transition metal atoms are interesting alloy cluster systems, yet their chemical bonding nature has not been sufficiently elucidated to date. We report herein on the theoretical prediction of a new example [...] Read more.
Inverse sandwich clusters composed of a monocyclic boron ring and two capping transition metal atoms are interesting alloy cluster systems, yet their chemical bonding nature has not been sufficiently elucidated to date. We report herein on the theoretical prediction of a new example of boron-based inverse sandwich alloy clusters, V2B7, through computational global-minimum structure searches and quantum chemical calculations. This alloy cluster has a heptatomic boron ring as well as a perpendicular V2 dimer unit that penetrates through the ring. Chemical bonding analysis suggests that the inverse sandwich cluster is governed by globally delocalized 6π and 6σ frameworks, that is, double 6π/6σ aromaticity following the (4n + 2) Hückel rule. The skeleton B−B σ bonding in the cluster is shown not to be strictly Lewis-type two-center two-electron (2c-2e) σ bonds. Rather, these are quasi-Lewis-type, roof-like 4c-2e V−B2−V σ bonds, which amount to seven in total and cover the whole surface of inverse sandwich in a truly three-dimensional manner. Theoretical evidence is revealed for a 2c-2e Lewis σ single bond within the V2 dimer. Direct metal–metal bonding is scarce in inverse sandwich alloy clusters. The present inverse sandwich alloy cluster also offers a new type of electronic transmutation in physical chemistry, which helps establish an intriguing chemical analogy between inverse sandwich clusters and planar hypercoordinate molecular wheels. Full article
(This article belongs to the Special Issue Aromatic Inorganic and Metallic Compounds)
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11 pages, 3432 KiB  
Communication
Five Bonds to Carbon through Tri-Coordination in Al3C3/0
by Abdul Hamid Malhan, Venkatesan S. Thimmakondu and Krishnan Thirumoorthy
Chemistry 2023, 5(2), 1113-1123; https://doi.org/10.3390/chemistry5020076 - 9 May 2023
Cited by 2 | Viewed by 4033
Abstract
Here, five bonds to carbon through tri-coordination are theoretically established in the global minimum energy isomers of Al3C3 anion (1a) and Al3C3 neutral (1n) for the first time. Various isomers of [...] Read more.
Here, five bonds to carbon through tri-coordination are theoretically established in the global minimum energy isomers of Al3C3 anion (1a) and Al3C3 neutral (1n) for the first time. Various isomers of Al3C3/0 are theoretically identified using density functional theory at the PBE0-D3/def2-TZVP level. Chemical bonding features are thoroughly analyzed for these two isomers (1a and 1n) with different bonding and topological quantum chemical tools, such as adaptive natural density partitioning (AdNDP), Wiberg Bond Indices (WBIs), nucleus-independent chemical shifts (NICS), and atoms in molecules (AIM) analyses. The structure of isomer 1a is planar with C2v symmetry, whereas its neutral counterpart 1n is non-planar with C2 symmetry, in which its terminal aluminum atoms are out of the plane. The central allenic carbon atom of isomers 1a and 1n exhibits tri-coordination and thus makes it a case of five bonds to carbon, which is confirmed through their total bond order as observed in WBI. Both the isomers show σ- and π-aromaticity and are predicted with the NICS and AdNDP analyses. Further, the results of ab initio molecular dynamics simulations reveal their kinetic stability at room temperature; thus, they are experimentally viable systems. Full article
(This article belongs to the Special Issue Hypercoordinate Carbon)
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19 pages, 5744 KiB  
Article
Crystal Structure, Hirshfeld Surface Analysis, and Computational Study of Quinolin-8-yl 4-Chlorobenzoate: Insights from Spectroscopic, Thermal, and Antitumor Properties
by Juan-Carlos Castillo, Diana Becerra and Mario A. Macías
Crystals 2023, 13(4), 694; https://doi.org/10.3390/cryst13040694 - 18 Apr 2023
Cited by 4 | Viewed by 2964
Abstract
We report the time-efficient synthesis of quinolin-8-yl 4-chlorobenzoate (3) via an O-acylation reaction between 8-hydroxyquinoline (1) and 4-chlorobenzoyl chloride (2) mediated by triethylamine in acetonitrile under heating at 80 °C for 20 min in the Monowave [...] Read more.
We report the time-efficient synthesis of quinolin-8-yl 4-chlorobenzoate (3) via an O-acylation reaction between 8-hydroxyquinoline (1) and 4-chlorobenzoyl chloride (2) mediated by triethylamine in acetonitrile under heating at 80 °C for 20 min in the Monowave 50 reactor. This protocol is distinguished by its short reaction time, operational simplicity, and clean reaction profile. The structure of 3 was fully characterized through a combination of analytical techniques, including NMR, IR, and UV–Vis spectroscopy, MS spectrometry, differential scanning calorimetry (DSC), thermogravimetry (TG), and crystallographic studies. Interestingly, X-ray diffraction analyses of 3 show that the crystal structure is characterized by C-H···N, C-H···O, Cl···π, and π···π interactions. The molecular conformation presents an orthogonal orientation between aromatic rings in the solid state. The calculated interaction energies using the CE-B3LYP model show that dispersion forces act in a higher proportion to build the crystal, which is consistent with the few short hydrogen interactions detected. Electrostatic potential maps suggest the formation of σ-holes over the Cl atoms. Although they can behave as both Lewis acid and base sites, Cl··Cl interactions are absent due to the shallow depth of these σ-holes. Quantum chemical descriptors and global reactivity descriptors were examined using the B3LYP method with the 6-31G(d,p) basis set implemented in CrystalExplorer. Finally, compound 3 exhibited low activity against HOP-92 and EKVX non-Small-cell lung and UO-31 Renal cancer cell lines, with a growth inhibition percentage (GI%) ranging from 6.2% to 18.1%. Full article
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11 pages, 3649 KiB  
Article
CAl4X4 (X = Te, Po): Double Aromatic Molecular Stars Containing Planar Tetracoordinate Carbon Atoms
by Li-Xia Bai and Jin-Chang Guo
Molecules 2023, 28(7), 3280; https://doi.org/10.3390/molecules28073280 - 6 Apr 2023
Cited by 5 | Viewed by 2329
Abstract
Planar tetracoordinate carbon (ptC) species are scarce and exotic. Introducing four peripheral Te/Po auxiliary atoms is an effective strategy to flatten the tetrahedral structure of CAl4 (Td, 1A1). Neutral CAl4X4 (X = Te, [...] Read more.
Planar tetracoordinate carbon (ptC) species are scarce and exotic. Introducing four peripheral Te/Po auxiliary atoms is an effective strategy to flatten the tetrahedral structure of CAl4 (Td, 1A1). Neutral CAl4X4 (X = Te, Po) clusters possess quadrangular star structures containing perfect ptC centers. Unbiased density functional theory (DFT) searches and high-level CCSD(T) calculations suggest that these ptC species are the global minima on the potential energy surfaces. Bonding analyses indicate that 40 valence-electron (VE) is ideal for the ptC CAl4X4 (X = Te, Po): one delocalized π and three σ bonds for the CAl4 core; four lone pairs (LPs) of four X atoms, eight localized Al–X σ bonds, and four delocalized Al–X–Al π bonds for the periphery. Thus, the ptC CAl4X4 (X = Te, Po) clusters possess the stable eight electron structures and 2π + 6σ double aromaticity. Born–Oppenheimer molecular dynamics (BOMD) simulations indicate that neutral ptC CAl4X4 (X = Te, Po) clusters are robust. Full article
(This article belongs to the Special Issue Aromatic Inorganic and Metallic Compounds)
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12 pages, 3964 KiB  
Article
Chemical Bonding and Dynamic Structural Fluxionality of a Boron-Based Na5B7 Sandwich Cluster
by Peng-Fei Han, Ying-Jin Wang, Lin-Yan Feng, Shu-Juan Gao, Qiang Sun and Hua-Jin Zhai
Molecules 2023, 28(7), 3276; https://doi.org/10.3390/molecules28073276 - 6 Apr 2023
Cited by 2 | Viewed by 2392
Abstract
Doping alkali metals into boron clusters can effectively compensate for the intrinsic electron deficiency of boron and lead to interesting boron-based binary clusters, owing to the small electronegativity of the former elements. We report on the computational design of a three-layered sandwich cluster, [...] Read more.
Doping alkali metals into boron clusters can effectively compensate for the intrinsic electron deficiency of boron and lead to interesting boron-based binary clusters, owing to the small electronegativity of the former elements. We report on the computational design of a three-layered sandwich cluster, Na5B7, on the basis of global-minimum (GM) searches and electronic structure calculations. It is shown that the Na5B7 cluster can be described as a charge-transfer complex: [Na4]2+[B7]3−[Na]+. In this sandwich cluster, the [B7]3− core assumes a molecular wheel in shape and features in-plane hexagonal coordination. The magic 6π/6σ double aromaticity underlies the stability of the [B7]3− molecular wheel, following the (4n + 2) Hückel rule. The tetrahedral Na4 ligand in the sandwich has a [Na4]2+ charge-state, which is the simplest example of three-dimensional aromaticity, spherical aromaticity, or superatom. Its 2σ electron counting renders σ aromaticity for the ligand. Overall, the sandwich cluster has three-fold 6π/6σ/2σ aromaticity. Molecular dynamics simulation shows that the sandwich cluster is dynamically fluxional even at room temperature, with a negligible energy barrier for intramolecular twisting between the B7 wheel and the Na4 ligand. The Na5B7 cluster offers a new example for dynamic structural fluxionality in molecular systems. Full article
(This article belongs to the Special Issue Aromatic Inorganic and Metallic Compounds)
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13 pages, 1299 KiB  
Article
New Insights into Adsorption Properties of the Tubular Au26 from AIMD Simulations and Electronic Interactions
by Ying Meng and Qiman Liu
Molecules 2023, 28(7), 2916; https://doi.org/10.3390/molecules28072916 - 24 Mar 2023
Cited by 2 | Viewed by 1864
Abstract
Recently, we revealed the electronic nature of the tubular Au26 based on spherical aromaticity. The peculiar structure of the Au26 could be an ideal catalyst model for studying the adsorptions of the Au nanotubes. However, through Google Scholar, we found that [...] Read more.
Recently, we revealed the electronic nature of the tubular Au26 based on spherical aromaticity. The peculiar structure of the Au26 could be an ideal catalyst model for studying the adsorptions of the Au nanotubes. However, through Google Scholar, we found that no one has reported connections between the structure and reactivity properties of Au26. Here, three kinds of molecules are selected to study the fundamental adsorption behaviors that occur on the surface of Au26. When one CO molecule is adsorbed on the Au26, the σ-hole adsorption structure is quickly identified as belonging to a ground state energy, and it still maintains integrity at a temperature of 500 K, where σ donations and π-back donations take place; however, two CO molecules make the structure of Au26 appear with distortions or collapse. When one H2 is adsorbed on the Au26, the H–H bond length is slightly elongated due to charge transfers to the anti-bonding σ* orbital of H2. The Au26-H2 can maintain integrity within 100 fs at 300 K and the H2 molecule starts moving away from the Au26 after 200 fs. Moreover, the Au26 can act as a Lewis base to stabilize the electron-deficient BH3 molecule, and frontier molecular orbitals overlap between the Au26 and BH3. Full article
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