Search Results (14)

One of the major challenges of studying biomarkers in tumor samples is the low quantity and quality of isolated RNA, DNA, and proteins. Additionally, the extraction methods ideally should obtain macromolecules from the same tumor biopsy, allowing better-integrated data interpretation. In this work, an in-house, low-cost, mixed-type tissue crusher combining blade and beating principles was made and the simultaneous isolation of macromolecules from human cells and tissues was achieved using TRIzol. RT-qPCR, genotyping, SDS-PAGE, and Western blot analysis were used to validate the approach. For tissue samples, RNA, DNA, and proteins resulted in an average yield of 677 ng/mg, 225 ng/mg, and 1.4 µg/mg, respectively. The same approach was validated using cell lines. The isolated macromolecule validation included the detection of mRNA levels of ATP-binding cassette (ABC) transporters through RT-qPCR, genotyping of TNFR1 (rs767455), and protein visualization through SDS-PAGE following Coomassie blue staining and Western blot. This work contributed to filling a gap in knowledge about TRIzol efficiency for the simultaneous extraction of RNA, DNA, and proteins from a single human tissue sample. A low-cost, high yield, and quality method was validated using target biomarkers of multidrug resistance mechanisms. This approach might be advantageous for future biomarker studies using different tissue specimens. Full article

This study explored a novel method using fructose-derived carbon dots (FCDs) for antitumor therapy in breast cancer (BC), marking a pioneering use of fructose as a carbon source for nanoparticle synthesis. BC, known for its complexity and heterogeneity, was chosen as a model due to its increasing mortality and incidence rates. The FCD synthesis involved the decomposition of fructose through microwave irradiation, followed by purification and characterization using techniques such as transmission electron microscopy, dynamic light scattering, fluorescence spectrophotometry, and Fourier-transform infrared spectroscopy. The FCDs, ranging in size from 2 to 6 nm, presented a hydrodynamic diameter below 2 nm, a spherical morphology, and a crystalline structure. As expected, FCDs were composed by carbon, oxygen, and hydrogen, and exhibited fluorescence with absorption and emission spectra at 405 nm and around 520 nm, respectively. Cell-based assays on breast epithelial and tumor cell lines demonstrated a dose-dependent response, with a decreased viability rate more pronounced in breast tumor cells. In conclusion, FCDs showed significant potential as selective antitumor agents for breast cancer therapy. The comprehensive characterization and cell-based assay evaluations provided valuable insights into the applications of these nanoparticles in breast cancer treatment, highlighting their selective toxicity and impact on tumor cells. Full article

The increasing global population and climate change threaten food security, with the need for sustenance expected to rise by 85% by 2050. Rice, a crucial staple food for over 50% of the global population, is a major source of calories in underdeveloped and developing countries. However, by the end of the century, over 30% of rice fields will become saline due to soil salinity caused by earthquakes, tsunamis, and rising sea levels. Plants have developed strategies to deal with salt stress, such as ion homeostasis, antioxidant defense mechanisms, and morphological adaptations. Proline, an endogenous osmolyte, is the predominant endogenous osmolyte that accumulates in response to salinity, and its overexpression in rice plants has been observed to increase plant salinity tolerance. Exogenously applied proline has been shown to improve plant salt tolerance by reducing the destructive effect of salinity. Recent research has focused on ionic toxicity, nitrogen fixation, and gene expression related to salt tolerance. Exogenous proline has been shown to improve water potential and leaf content, restoring water usage efficiency. It can also ease growth inhibition in salt-sensitive plants. Exogenously applied proline increases antioxidant activities and enhances plant salinity tolerance. This review examines the role and processes of proline in rice plants under salt stress and its relationship with other tolerance mechanisms. Full article

The COVID-19 pandemic, caused by the coronavirus SARS-CoV-2, has generated a renewed interest in the larger family of Coronaviridae, which causes a variety of different respiratory infections in a variety of different hosts. Understanding the mechanisms behind the ability of a family of viruses to spill over into different hosts is an ongoing study. In this work, we studied the relationship between specific amino acid sites and the solvent accessibility of the surface (or spike) protein of different Coronaviridae. Since host specificity hinges on the portion(s) of the protein that interfaces with the host cell membrane, there could be a relationship between information gain in specific amino acid sites and solvent accessibility. We found a connection between sites with high information gain and solvent accessibility within several major subgenera of Coronaviridae. Such a connection could be used to study other lesser-known families of viruses, which is desirable because information gain is much easier to compute when the number of sequences is large, as we show. Finally, we produced a visualization of the sequences within each major subgenus and discussed several regions of interest, as well as focused on some pairs of Coronaviridae hosts of interest. Full article

Local communities in Mzimba District, Malawi, have limited access to healthcare services and often rely on traditional medical practice and medicinal plants (MPs) for most of their medical care. However, phytomedicines’ use has not been well documented. This study aimed to identify and document medicinal plants and the associated ethnobotanical knowledge. Ethnobotanical data were collected in seven localities (19 villages) in the T/A Mbelwa, Mzimba, from May to June 2021. Forty traditional healers, herbalists, and farmers selected purposively and by snowball sampling were interviewed through semi-structured interviews, field observations, group discussions, and guided field walks. Quantitative indices, viz. relative frequency of citation (RFC), use value (UV), relative importance (RI) values, informant consensus factors (ICFs), and fidelity levels (FLs), were used to analyze the data. Eighty MPs belonging to 43 families and 77 genera were recorded. The Leguminosae family showed the highest number of species (16), followed by Solanaceae, Rubiaceae, and Phyllanthaceae. Trees (35 species) and roots (62%) accounted for the most significant habit and part, respectively. Washing (29%) was the most common preparation method. The most cited plant was Zanthoxylum chalybeum (RFC = 0.80, UV = 0.28, RI = 1.66), followed by Cassia abbreviata (RFC = 0.68, UV = 0.35, RI = 1.50). Respiratory disorders showed the highest ICF (0.53), followed by general and unspecified disorders (0.31). Z. chalybeum, C. abbreviata, and Oldfieldia dactylophylla showed maximum FLs (100%) for treating malaria and dysentery. Phytochemical, bioassay, toxicity, and conservation studies are needed to assess medicinal plants’ safety, efficacy, and quality as steps toward discovering new promising therapeutic leads without neglecting conservation programs for their sustainable utilization. Full article

Foot-related problems are prevalent across the globe, and this issue is aggravated by the presence of diabetes mellitus. Diabetic-foot-related issues include extreme foot pain, plantar corns, and diabetic foot ulcers. To assess these conditions, accurate characterization of plantar pressure is required. In this work, an in-shoe, low-cost, and multi-material pressure measuring insole, based on a piezoresistive material, was developed. The device has a high number of sensors, and was tested on 25 healthy volunteers and 25 patients with different degrees of diabetes. The working range of the device was observed to be 5 kPa to 900 kPa, with an average hysteresis error of 3.25%. Plantar pressure was found to increase from healthy to diabetic volunteers, in terms of both standing and walking. In the case of the diabetic group, the-high pressure contact area was found to strongly and positively correlate (R² = 0.78) with the peak plantar pressure. During the heel strike phase, the diabetic volunteers showed high plantar pressure on the medial heel region. In regard to the toe-off phase, the central forefoot was found to be a prevalent site for high plantar pressure across the diabetic volunteers. The developed device is expected not only to assist in the prediction of diabetic ulceration or re-ulceration, but also to provide strategies and suggestions for foot pressure alleviation and pain mitigation. Full article

During disease or toxin challenges, the behavioral activities of grazing animals alter in response to adverse situations, potentially providing an indicator of their welfare status. Behavioral changes such as feeding behavior, rumination and physical behavior as well as expressive behavior, can serve as indicators of animal health and welfare. Sometimes behavioral changes are subtle and occur gradually, often missed by infrequent visual monitoring until the condition becomes acute. There is growing popularity in the use of sensors for monitoring animal health. Acceleration sensors have been designed to attach to ears, jaws, noses, collars and legs to detect the behavioral changes of cattle and sheep. So far, some automated acceleration sensors with high accuracies have been found to have the capacity to remotely monitor the behavioral patterns of cattle and sheep. These acceleration sensors have the potential to identify behavioral patterns of farm animals for monitoring changes in behavior which can indicate a deterioration in health. Here, we review the current automated accelerometer systems and the evidence they can detect behavioral patterns of animals for the application of potential directions and future solutions for automatically monitoring and the early detection of health concerns in grazing animals. Full article

A statistical analysis of important DNA sequences and related proteins has been performed to study the relationships between monomers, and some general considerations about these macromolecules can be provided from the results. First, the most important relationship between sites in all the DNA sequences examined is that between two consecutive base pairs. This is an indication of an energetic stabilization due to the stacking interaction of these couples of base pairs. Secondly, the difference between human chromosome sequences and their coding parts is relevant both in the relationships between sites and in some specific compositional rules, such as the second Chargaff rule. Third, the evidence of the relationship in two successive triplets of DNA coding sequences generates a relationship between two successive amino acids in the proteins. This is obviously impossible if all the relationships between the sites are statistical evidence and do not involve causes; therefore, in this article, due to stacking interactions and this relationship in coding sequences, we will divide the concept of the relationship between sites into two concepts: affinity and correlation, the first with physical causes and the second without. Finally, from the statistical analyses carried out, it will emerge that the human genome is uniform, with the only significant exception being the Y chromosome. Full article

This study presents the diversity of anthelmintic plants in the cotton zone of Central Benin. The aim was to identify the medicinal anthelmintic plants used by small ruminant breeders in cotton zone of Central Benin to treat gastrointestinal parasites. Three hundred and sixty breeders were selected during individual semi-structured face-to-face interviews. Different quantitative indices of cultural importance were calculated in order to determine the level of use of plant species. Jaccard similarity index (JI) was calculated and Pearson’s correlation was determined for Use Value (UV) and Relative Frequency of Citation (RFC). In this study, a total of 99 medicinal species, of which 63 have anthelmintic potential, were listed, including Khaya senegalensis, Launaea taraxacifolia, Napoleonaea vogelii, Momordica charantia and Vernonia amygdalina, which all had UV and RFC above 20%. Each of them had a Fidelity Level above 50% and an Informant Agreement Rate (IAR) value close to one. Pearson’s correlation showed a significant correlation between RFC and UV with r = 0.94, and the studies were clearly independent (IJ < 50%). This study showed that the cotton zone of Central Benin represents 4% of the total flora of Benin, with many anthelmintic plants such as Launaea taraxacifolia and Napoleonaea vogelii that require further investigation. Full article

Applying scientific evidence through risk analysis is an important orientation for the international frameworks that have informed the Philippines’ current food-safety legislation. When implementing this legislation, local government units (LGUs) in the Philippines deal with manifold critical responsibilities using various product-based inspection procedures. This qualitative study was conducted at the end of 2017 with a focus on exploring one LGU’s food service inspection practices. The twofold aim was to find needs in the current food inspection capacity, and to illuminate how risk-based legislation is enacted among LGUs in the Philippines. Taking a discursive approach to help explain and describe the LGU’s practices and needs, the methods included an analysis of administrative documents, focus-group discussions, and observational research. This study explains the LGU’s role in carrying out food agencies’ national responsibilities; it also describes how, if adequate resources were available, new roles could exist for food safety officers and food inspectors. In conclusion, fulfilling the LGU’s needs with respect to national and regional standards would require implementation of a risk-based approach for food inspection. Full article

Aloe Vera leaves have great potential as an economic supplement with an adequate nutritional profile. The current study aimed to fortify plain (loaf) cakes with Aloe Vera leaf gel (AVG) powder. AVG was freeze-dried to produce Aloe Vera powder (ALP), and four plain (loaf) cakes were prepared with different proportions of ALP (0, 4, 6, and 8%). ALP contained significantly (p < 0.05) more protein (22.23 vs. 12.24), ash (19.83 vs. 0.64), and iron (175 vs. 3.05) than refined wheat flour (RWF). Along with total polyphenols and total flavonoids, ALP demonstrated good antioxidant activity. ALP-cakes and RWF-cakes were also evaluated for their nutritional and functional properties. The addition of 6 and 8% ALP to the formulation increased total polyphenols, total flavonoids, and antioxidant activity in plain (loaf) cakes. Hardness and chewiness increased in ALP-cakes but decreased in RWF-cakes, while cohesiveness and springiness decreased in ALP-cakes. In conclusion, the best formulation was a 4% ALP incorporated cake, and ALP can be supplemented in plain cakes at a rate of up to 8% to improve nutrient value. This is the first study to evaluate the quality characteristics of fortified plain (loaf) cakes using ALP. Full article

Commercial horticulture in many regions of the world depends upon Sphagnum peat as a potting-media substrate, but extracting peat has serious environmental consequences. Composts may be able to serve as effective substitutes for peat and offer potential environmental advantages. The suitability of compost as potting media depends upon the raw materials as well as processing methods used. This study includes two related experiments—one with beet (Beta vulgaris L.) and the other with tomato (Solanum lycopersicum L.)—aimed at assessing the potential viability of farm-produced, food-residuals compost as a replacement for peat-based potting media in the production of organic vegetable transplants. The experiments were conducted in 2021 on the Berea College Farm in Kentucky, USA, a USDA certified organic farm. The results indicated that potting media composed of 75% to 100% compost performed as well as fertilized, peat-based growing media for plant growth. Further, although weeds were present in the compost, weed pressure was not severe enough to adversely affect crop growth. Thus, sterilization of compost, which did eliminate weeds in the compost, was not deemed necessary for using the compost as a partial or complete potting medium. Compost pasteurization was also assessed but was ineffective in destroying weed seeds. Full article

Previously, we reported that microglial expression of histone deacetylases 1 and 2 (Hdac1 and Hdac2) is required for microglial maturation and modulates disease progression in a mouse model of Alzheimer’s disease. Here, we analyze the role of microglial expression of Hdac1 and Hdac2 in another disease paradigm, namely experimental autoimmune encephalomyelitis (EAE), an animal model for multiple sclerosis. The aim of this study was to ascertain whether microglial expression of these two epigenetic regulators modulates disease progression in the context of autoimmune disease. Hdac1 and Hdac2 were knocked out either individually or in combination using a microglia-specific, tamoxifen-inducible Cre-deleter line (Cx3cr1-CreERT2). The clinical course as well as histopathological changes during EAE were assessed in adult mice lacking microglial expression of these genes. Overall, no differences in disease onset, progression or severity could be detected in mice lacking microglial expression of either one or both of Hdac1 and Hdac2 genes. Similarly, the histopathology showed no differences in lymphocyte or macrophage infiltration or demyelination in either of the analyzed groups. As such, we conclude that unlike in neurodegenerative disease, microglial expression of Hdac1 and Hdac2 does not play a role in EAE. Full article

Cosmeceutical formulations containing naturally derived active ingredients are currently preferred by consumers worldwide. Mushrooms are one of the potential sources for cosmeceutical ingredients but relevant research is still lacking. In this study, hot- and cold-water extractions were performed on four locally-cultivated mushrooms—Pleurotus ostreatus, Ganoderma lucidum, Auricularia polytricha and Schizophyllum commune—with the aim to assess the cosmeceutical potential of these mushroom fruitbody extracts. Total phenolics, polysaccharide and glucan content were determined. Antioxidant property of the mushroom extracts was assessed by determining the DPPH radical scavenging, ferric-reducing (FRAP) and superoxide anion (SOA) scavenging activity. Anti-hyaluronidase activity was used as an indicator for the anti-aging and anti-inflammatory property, while anti-tyrosinase activity was evaluated to assess the anti-pigmentation or whitening property of these extracts. Our results showed that total polysaccharide content of P. ostreatus extracts was the highest (235.8–253.6 mg GE/g extract), while extracts from G. lucidum contained the lowest glucan (10.12–10.67%). Cold-water extract from S. commune exhibited substantial tyrosinase inhibition activity (98.15%) and SOA scavenging activity (94.82%). The greatest hyaluronidase activity was exhibited by G. lucidum hot-water extract, with the value of 72.78%. The findings from the correlation analyses suggest that the cosmeceutical properties of these mushrooms can be attributed mainly to the combination of different types of compound such as polysaccharides and phenolics. Overall, cold-water extract of S. commune and hot-water extract of G. lucidum showed the best results and may be further investigated. Full article