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Search Results (6)

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Authors = Muhammad Siddique Afridi ORCID = 0000-0002-5505-2612

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20 pages, 7847 KiB  
Article
Brassinosteroid-Mediated Resistance to Cobalt-Induced Toxicity by Regulating Hormonal Balance, Cellular Metabolism, and Antioxidant Defense in Maize
by Abdul Salam, Jinzhe Chang, Liupeng Yang, Muhammad Zeeshan, Anas Iqbal, Ali Raza Khan, Muhammad Siddique Afridi, Zaid Ulhassan, Wardah Azhar, Zhixiang Zhang and Peiwen Zhang
Plants 2025, 14(13), 2076; https://doi.org/10.3390/plants14132076 - 7 Jul 2025
Viewed by 450
Abstract
Brassinosteroids (BRs) play an essential role in regulating plant metabolic pathways that influence growth, development, and stress responses. However, their role in alleviating cobalt (Co) stress has not been extensively studied. This research aimed to assess the impact of exogenous BRs (0.1 µM) [...] Read more.
Brassinosteroids (BRs) play an essential role in regulating plant metabolic pathways that influence growth, development, and stress responses. However, their role in alleviating cobalt (Co) stress has not been extensively studied. This research aimed to assess the impact of exogenous BRs (0.1 µM) on maize subjected to Co stress (300 µM) in a hydroponic experiment. The results indicated that BR supplementation significantly decreased the accumulation of H2O2 by 17.79 and 16.66%, O2•− by 28.5 and 21.48%, and MDA by 37.5 and 37.9% in shoot and root, respectively, as compared to Co stress alone. Additionally, BRs enhanced endogenous levels of BRs (31.16%) and growth hormones (IAA 50.8%, JA 57.8%, GA 52.5%), and reduced Co contents by 26.3% in roots and 36.1% in shoots. BRs enhanced antioxidant enzyme activity both in the shoot and root, leading to reduced ROS levels as confirmed by laser scanning confocal microscopy. Furthermore, BRs increased phenols, flavonoids, and soluble sugars, and elevated total protein content. Observations from transmission electron microscopy indicated reduced ultrastructural damage in plants treated with BRs under Co stress. Taken together, this study highlights the role of BRs in alleviating Co stress in maize, demonstrating their efficiency in enhancing stress tolerance by modulating hormone levels and key metabolic processes. Full article
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17 pages, 1275 KiB  
Review
Occurrence of Mycotoxins in Foods: Unraveling the Knowledge Gaps on Their Persistence in Food Production Systems
by Sher Ali, Lucas Gabriel Dionisio Freire, Vanessa Theodoro Rezende, Muhammad Noman, Sana Ullah, Abdullah, Gul Badshah, Muhammad Siddique Afridi, Fernando Gustavo Tonin and Carlos Augusto Fernandes de Oliveira
Foods 2023, 12(23), 4314; https://doi.org/10.3390/foods12234314 - 29 Nov 2023
Cited by 20 | Viewed by 3521
Abstract
In this review, the intricate issue about the occurrence levels of mycotoxins in foods is discussed aiming to underline the main knowledge gaps on the persistence of these toxicants in the food production system. Mycotoxins have been a key challenge to the food [...] Read more.
In this review, the intricate issue about the occurrence levels of mycotoxins in foods is discussed aiming to underline the main knowledge gaps on the persistence of these toxicants in the food production system. Mycotoxins have been a key challenge to the food industry, economic growth, and consumers’ health. Despite a breadth of studies over the past decades, the persistence of mycotoxins in foods remain an overlooked concern that urges exploration. Therefore, we aimed to concisely underline the matter and provide possible biochemical and metabolic details that can be relevant to the food sector and overall public health. We also stress the application of computational modeling, high-throughput omics, and high-resolution imaging approaches, which can provide insights into the structural and physicochemical characteristics and the metabolic activities which occur in a stored cereal grain’s embryo and endosperm and their relationship with storage fungi and mycotoxins on a cellular level. In addition, there is a need for extensive collaborative network and funding, which will play a key role in finding effective solutions against the persistence of mycotoxins at the genetic and molecular to metabolic levels in the food system. Full article
(This article belongs to the Section Food Quality and Safety)
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22 pages, 1727 KiB  
Review
Plant Microbiome Engineering: Hopes or Hypes
by Muhammad Siddique Afridi, Sher Ali, Abdul Salam, Willian César Terra, Aqsa Hafeez, Sumaira, Baber Ali, Mona S. AlTami, Fuad Ameen, Sezai Ercisli, Romina Alina Marc, Flavio H. V. Medeiros and Rohini Karunakaran
Biology 2022, 11(12), 1782; https://doi.org/10.3390/biology11121782 - 7 Dec 2022
Cited by 67 | Viewed by 9806
Abstract
Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant’s second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. [...] Read more.
Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant’s second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering. Full article
(This article belongs to the Section Plant Science)
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24 pages, 2359 KiB  
Review
Nano-Priming against Abiotic Stress: A Way Forward towards Sustainable Agriculture
by Abdul Salam, Muhammad Siddique Afridi, Muhammad Ammar Javed, Aroona Saleem, Aqsa Hafeez, Ali Raza Khan, Muhammad Zeeshan, Baber Ali, Wardah Azhar, Sumaira, Zaid Ulhassan and Yinbo Gan
Sustainability 2022, 14(22), 14880; https://doi.org/10.3390/su142214880 - 10 Nov 2022
Cited by 80 | Viewed by 8250
Abstract
Agriculture is directly linked to human life, providing food for survival and health. It is threatened by a number of challenges, such as climate change, resource depletion, and abiotic stresses, including heavy metals (HMs), salinity, drought, etc. Various strategies have been employed to [...] Read more.
Agriculture is directly linked to human life, providing food for survival and health. It is threatened by a number of challenges, such as climate change, resource depletion, and abiotic stresses, including heavy metals (HMs), salinity, drought, etc. Various strategies have been employed to palliate the phytotoxic effects of these stressors from the soil–plant system. Nanotechnological approaches have emerged as a promising tool for increasing crop productivity and promoting sustainable agriculture. Interestingly, the seed nano-priming approach has shown potential against all of the above-mentioned abiotic stress factors and has improved crop productivity. The application of nanoparticles (NPs) via seed priming is an innovative and cost-effective approach that improves seed germination and subsequent plant growth by activating plant physiological processes and providing tolerance against various stresses. The seed priming with NPs induces electron exchange and increases surface reaction capabilities related to plant cell and tissue components. This review aims to provide an overview of recent advances and research findings on seed nano-priming and the possible mechanism of plant stress-tolerance augmentation against various stresses. Furthermore, we also shed light on gaps in studies conducted in previous years, which will open new avenues for future research. Full article
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25 pages, 4049 KiB  
Article
Bacillus mycoides PM35 Reinforces Photosynthetic Efficiency, Antioxidant Defense, Expression of Stress-Responsive Genes, and Ameliorates the Effects of Salinity Stress in Maize
by Baber Ali, Xiukang Wang, Muhammad Hamzah Saleem, Muhammad Atif Azeem, Muhammad Siddique Afridi, Mehwish Nadeem, Mehreen Ghazal, Tayyaba Batool, Ayesha Qayyum, Aishah Alatawi and Shafaqat Ali
Life 2022, 12(2), 219; https://doi.org/10.3390/life12020219 - 30 Jan 2022
Cited by 98 | Viewed by 6759
Abstract
Soil salinity is one of the abiotic constraints that imbalance nutrient acquisition, hampers plant growth, and leads to potential loss in agricultural productivity. Salt-tolerant plant growth-promoting rhizobacteria (PGPR) can alleviate the adverse impacts of salt stress by mediating molecular, biochemical, and physiological status. [...] Read more.
Soil salinity is one of the abiotic constraints that imbalance nutrient acquisition, hampers plant growth, and leads to potential loss in agricultural productivity. Salt-tolerant plant growth-promoting rhizobacteria (PGPR) can alleviate the adverse impacts of salt stress by mediating molecular, biochemical, and physiological status. In the present study, the bacterium Bacillus mycoides PM35 showed resistance up to 3 M NaCl stress and exhibited plant growth-promoting features. Under salinity stress, the halo-tolerant bacterium B. mycoides PM35 showed significant plant growth-promoting traits, such as the production of indole acetic acid, siderophore, ACC deaminase, and exopolysaccharides. Inoculation of B. mycoides PM35 alleviated salt stress in plants and enhanced shoot and root length under salinity stress (0, 300, 600, and 900 mM). The B. mycoides PM35 alleviated salinity stress by enhancing the photosynthetic pigments, carotenoids, radical scavenging capacity, soluble sugars, and protein content in inoculated maize plants compared to non-inoculated plants. In addition, B. mycoides PM35 significantly boosted antioxidant activities, relative water content, flavonoid, phenolic content, and osmolytes while reducing electrolyte leakage, H2O2, and MDA in maize compared to control plants. Genes conferring abiotic stress tolerance (CzcD, sfp, and srfAA genes) were amplified in B. mycoides PM35. Moreover, all reactions are accompanied by the upregulation of stress-related genes (APX and SOD). Our study reveals that B. mycoides PM35 is capable of promoting plant growth and increasing agricultural productivity. Full article
(This article belongs to the Collection State of the Art in Plant Science)
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26 pages, 3448 KiB  
Article
PGPR-Mediated Salt Tolerance in Maize by Modulating Plant Physiology, Antioxidant Defense, Compatible Solutes Accumulation and Bio-Surfactant Producing Genes
by Baber Ali, Xiukang Wang, Muhammad Hamzah Saleem, Sumaira, Aqsa Hafeez, Muhammad Siddique Afridi, Shahid Khan, Zaib-Un-Nisa, Izhar Ullah, Antônio Teixeira do Amaral Júnior, Aishah Alatawi and Shafaqat Ali
Plants 2022, 11(3), 345; https://doi.org/10.3390/plants11030345 - 27 Jan 2022
Cited by 190 | Viewed by 11130
Abstract
Salinity stress is a barrier to crop production, quality yield, and sustainable agriculture. The current study investigated the plant growth promotion, biochemical and molecular characterization of bacterial strain Enterobacter cloacae PM23 under salinity stress (i.e., 0, 300, 600, and 900 mM). E. cloacae [...] Read more.
Salinity stress is a barrier to crop production, quality yield, and sustainable agriculture. The current study investigated the plant growth promotion, biochemical and molecular characterization of bacterial strain Enterobacter cloacae PM23 under salinity stress (i.e., 0, 300, 600, and 900 mM). E. cloacae PM23 showed tolerance of up to 3 M NaCl when subjected to salinity stress. Antibiotic-resistant Iturin C (ItuC) and bio-surfactant-producing genes (sfp and srfAA) were amplified in E. cloacae PM23, indicating its multi-stress resistance potential under biotic and abiotic stresses. Moreover, the upregulation of stress-related genes (APX and SOD) helped to mitigate salinity stress and improved plant growth. Inoculation of E. cloacae PM23 enhanced plant growth, biomass, and photosynthetic pigments under salinity stress. Bacterial strain E. cloacae PM23 showed distinctive salinity tolerance and plant growth-promoting traits such as indole-3-acetic acid (IAA), siderophore, ACC deaminase, and exopolysaccharides production under salinity stress. To alleviate salinity stress, E. cloacae PM23 inoculation enhanced radical scavenging capacity, relative water content, soluble sugars, proteins, total phenolic, and flavonoid content in maize compared to uninoculated (control) plants. Moreover, elevated levels of antioxidant enzymes and osmoprotectants (Free amino acids, glycine betaine, and proline) were noticed in E. cloacae PM23 inoculated plants compared to control plants. The inoculation of E. cloacae PM23 significantly reduced oxidative stress markers under salinity stress. These findings suggest that multi-stress tolerant E. cloacae PM23 could enhance plant growth by mitigating salt stress and provide a baseline and ecofriendly approach to address salinity stress for sustainable agriculture. Full article
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