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Authors = Dimitrios Natsiopoulos

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22 pages, 7698 KiB  
Article
A Regional Gravimetric and Hybrid Geoid Model in Northern Greece from Dedicated Gravity Campaigns
by Georgios S. Vergos, Dimitrios A. Natsiopoulos, Elisavet G. Mamagiannou, Eleni A. Tzanou, Anastasia I. Triantafyllou, Ilias N. Tziavos, Dimitrios Ramnalis and Vassilios Polychronos
Remote Sens. 2025, 17(2), 197; https://doi.org/10.3390/rs17020197 - 8 Jan 2025
Viewed by 1594
Abstract
The determination of physical heights is of key importance for a wide spectrum of geoscientific applications and, in particular, for engineering projects. The main scope of the present work is focused on the determination of a high-accuracy and high-resolution gravimetric and hybrid geoid [...] Read more.
The determination of physical heights is of key importance for a wide spectrum of geoscientific applications and, in particular, for engineering projects. The main scope of the present work is focused on the determination of a high-accuracy and high-resolution gravimetric and hybrid geoid model, to determine orthometric heights without the need of conventional leveling. Both historical and newly acquired gravity data have been collected during dedicated gravity campaigns, around the location of a dedicated GNSS network as well as areas where the existing land gravity database presented voids. Geoid determination was based on the classical remove–compute–restore (RCR) technique and spectral and stochastic approaches. The low frequencies have been modeled based on the XGM2019e global geopotential model (GGM) and the topographic effects have been evaluated with the residual terrain model (RTM) reduction. The evaluation of the final geoid model was performed over 462 GNSS/leveling benchmarks (BMs), where the newly determined gravimetric geoid has shown an improvement of 3.1 cm, in the std of the differences to the GNSS/leveling BMs, compared to the latest national geoid model. A deterministic and stochastic fit to the GNSS/leveling data has been performed, investigating various choices for the parametric models and analytical covariance functions. The scope was to determine a hybrid geoid model, tailored to the area and GNSS/leveling data, which will be the one used for the direct estimation of high-accuracy orthometric heights from GNSS observations. After the deterministic fit, a std to the GNSS/leveling data of 10.1 cm has been achieved, with 54.8% and 83.1% of the absolute height differences being below the 1 cm and 2 cm per square root km of baseline length. The final hybrid geoid model, i.e., after the stochastic treatment of the adjusted residuals, gave a std of the difference to the GNSS/leveling data of 1.1 cm, with 99.8% and 99.9% of the height difference being smaller than the 1 cm and 2 cm standard errors, thus achieving a 1 cm accuracy regional geoid. Full article
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21 pages, 345 KiB  
Review
Endophytic Trichoderma: Potential and Prospects for Plant Health Management
by Dimitrios Natsiopoulos, Eleni Topalidou, Spyridon Mantzoukas and Panagiotis A. Eliopoulos
Pathogens 2024, 13(7), 548; https://doi.org/10.3390/pathogens13070548 - 28 Jun 2024
Cited by 5 | Viewed by 2787
Abstract
The fungus Trichoderma is widely regarded as the most common fungal biocontrol agent for plant health management. More than 25 Trichoderma species have been extensively studied and have demonstrated significant potential in inhibiting not only phytopathogen growth but also insect pest infestations. In [...] Read more.
The fungus Trichoderma is widely regarded as the most common fungal biocontrol agent for plant health management. More than 25 Trichoderma species have been extensively studied and have demonstrated significant potential in inhibiting not only phytopathogen growth but also insect pest infestations. In addition to their use as biopesticides, there is increasing evidence that several Trichoderma species can function as fungal endophytes by colonizing the tissues of specific plants. This colonization enhances a plant’s growth and improves its tolerance to abiotic and biotic stresses. In recent decades, there has been a proliferation of literature on the role of Trichoderma endophytes in crop protection. Although the mechanisms underlying plant–fungal endophyte interactions are not yet fully understood, several studies have suggested their potential application in agriculture, particularly in the mitigation of plant pests and diseases. This review focuses on the diversity of Trichoderma endophytic strains and their potential use in controlling specific diseases and pests of crop plants. Trichoderma endophytes are considered a potential solution to reduce production costs and environmental impact by decreasing reliance on agrochemicals. Full article
(This article belongs to the Special Issue Fungal Pathogens of Crops)
10 pages, 1429 KiB  
Article
Only 32.3% of Breast Cancer Families with Pathogenic Variants in Cancer Genes Utilized Cascade Genetic Testing
by Konstantinos Agiannitopoulos, Kevisa Potska, Anastasia Katseli, Christina Ntogka, Georgios N. Tsaousis, Georgia Pepe, Dimitra Bouzarelou, Nikolaos Tsoulos, Athanasios Papathanasiou, Dimitrios Ziogas, Vassileios Venizelos, Christos Markopoulos, Rodoniki Iosifidou, Sofia Karageorgopoulou, Stylianos Giassas, Ioannis Natsiopoulos, Konstantinos Papazisis, Maria Vasilaki-Antonatou, Amanta Psyrri, Anna Koumarianou, Dimitrios Matthaios, Eleni Zairi, Alexandru Blidaru, Eugeniu Banu, Dan Corneliu Jinga, Şahin Laçin, Mustafa Özdoğan, Eirini Papadopoulou and George Nasioulasadd Show full author list remove Hide full author list
Cancers 2023, 15(21), 5218; https://doi.org/10.3390/cancers15215218 - 30 Oct 2023
Cited by 10 | Viewed by 2011
Abstract
Background: Hereditary cancer predisposition syndromes are responsible for approximately 5–10% of all diagnosed cancer cases. In order to identify individuals at risk in a cost-efficient manner, family members of individuals carrying pathogenic alterations are tested only for the specific variant that was identified [...] Read more.
Background: Hereditary cancer predisposition syndromes are responsible for approximately 5–10% of all diagnosed cancer cases. In order to identify individuals at risk in a cost-efficient manner, family members of individuals carrying pathogenic alterations are tested only for the specific variant that was identified in their carrier relative. The purpose of this study was to investigate the clinical use and implementation of cascade family testing (CFT) in families of breast cancer patients with pathogenic/likely pathogenic variants (PVs/LPVs) in cancer-related predisposition genes. Methods: Germline sequencing was carried out with NGS technology using a 52-gene panel, and cascade testing was performed by Sanger sequencing or MLPA. Results: In a cohort of 1785 breast cancer patients (families), 20.3% were found to have PVs/LPVs. Specifically, 52.2%, 25.1%, and 22.7% of patients had positive findings in high-, intermediate-, and low-penetrance breast cancer susceptibility genes, respectively. Although CFT was recommended to all families, only 117 families (32.3%) agreed to proceed with genetic testing. Among the first-degree relatives who underwent CFT, 70.3% were female, and 108 of 121 (89.3%) were cancer free. Additionally, 42.7%, 36.7%, and 20.6% were offspring, siblings, and parents of the subject, respectively. Our data suggest that CFT was mostly undertaken (104/117, 88.8%) in families with positive findings in high-risk genes. Conclusions: Cascade family testing can be a powerful tool for primary cancer prevention by identifying at-risk family members. It is of utmost importance to implement genetic counseling approaches leading to increased awareness and communication of genetic testing results. Full article
(This article belongs to the Special Issue The Study of Cancer Susceptibility Genes (Volume II))
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21 pages, 12230 KiB  
Article
Geoid Studies in Two Test Areas in Greece Using Different Geopotential Models towards the Estimation of a Reference Geopotential Value
by Vassilios N. Grigoriadis, Vassilios D. Andritsanos, Dimitrios A. Natsiopoulos, Georgios S. Vergos and Ilias N. Tziavos
Remote Sens. 2023, 15(17), 4282; https://doi.org/10.3390/rs15174282 - 31 Aug 2023
Cited by 2 | Viewed by 1550
Abstract
In the present study, we first examine the contribution of different, satellite-only or combined, global geopotential models in geoid computation employing the remove–compute–restore approach. For this reason, two test areas of about 100 km2 each, one in northern and one in central [...] Read more.
In the present study, we first examine the contribution of different, satellite-only or combined, global geopotential models in geoid computation employing the remove–compute–restore approach. For this reason, two test areas of about 100 km2 each, one in northern and one in central Greece, were selected, and gravity measurements were conducted. These new gravity measurements were used along with the selected geopotential models to produce the reduced gravity field for the study areas. The classical and spectral residual terrain modeling effect is also removed to derive the residual gravity field. The latter is used for geoid computation using the 1D fast Fourier transform. The validation of the geoid models is carried out with gravity/GNSS/leveling measurements, which were conducted in two traverses located in the study areas. Special attention is given to the tidal approach, the geoid separation term as well as the coordinate reference system. Next, the northern study area is extended by incorporating gravity measurements obtained during the last five decades, and geoid models are recomputed. Lastly, using the geoid models computed, reference geopotential values are computed for both areas. From the results achieved for both study areas, the combined model XGM2019 provides the best overall statistical results with differences of 0.065 m and 0.036 m in terms of root mean square error. The incorporation of not recent data into the solutions leads to a degradation in accuracy by about 1.2 cm in terms of standard deviation. Lastly, the computed reference geopotential values present discrepancies between the two study areas, revealing network inconsistencies as well as the dependency on the geopotential model used for the geoid computations. Full article
(This article belongs to the Section Earth Observation Data)
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20 pages, 15276 KiB  
Article
Validation of Recent DSM/DEM/DBMs in Test Areas in Greece Using Spirit Leveling, GNSS, Gravity and Echo Sounding Measurements
by Vassilios N. Grigoriadis, Vassilios D. Andritsanos and Dimitrios A. Natsiopoulos
ISPRS Int. J. Geo-Inf. 2023, 12(3), 99; https://doi.org/10.3390/ijgi12030099 - 27 Feb 2023
Cited by 5 | Viewed by 2088
Abstract
Recent Digital Surface, Elevation, and Bathymetric Models (DSM/DEM/DBM) aim to provide high-resolution and accurate height and depth information needed for a variety of surveying, geodetic, geophysical, and other applications. In this study, first we aim to validate in two test areas some of [...] Read more.
Recent Digital Surface, Elevation, and Bathymetric Models (DSM/DEM/DBM) aim to provide high-resolution and accurate height and depth information needed for a variety of surveying, geodetic, geophysical, and other applications. In this study, first we aim to validate in two test areas some of the most used models, i.e., ASTER GDEM; AW3D30 DSM; Copernicus DEM; EU-DEM; GEBCO 2020; NASADEM HGT; SRTM15+ and SRTM Global, using GNSS; spirit leveling; and gravity measurements. The validation is performed along two traverses of 14.5 and 12.0 km each in Northern and Central Greece, respectively. Since these models are based on geoid heights obtained from global geopotential models, we also investigate their influence on the validation results. Next, we carry out comparisons between GEBCO 2020, SRTM15+, and the Greek Seas DTM, with depths derived from in situ coastal measurements in six different areas in Northern Greece. From the analysis, we conclude that the heights obtained from the Copernicus DEM provide the best overall results in terms of mean value and standard deviation while also showing consistent results in the two test areas. Similarly, the Greek Seas DTM shows better consistency with the measured depths in the coastal test areas. Full article
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26 pages, 22359 KiB  
Article
GOCE Downward Continuation to the Earth’s Surface and Improvements to Local Geoid Modeling by FFT and LSC
by Dimitrios A. Natsiopoulos, Elisavet G. Mamagiannou, Eleftherios A. Pitenis, Georgios S. Vergos and Ilias N. Tziavos
Remote Sens. 2023, 15(4), 991; https://doi.org/10.3390/rs15040991 - 10 Feb 2023
Cited by 5 | Viewed by 2172
Abstract
One of the main applications of the gravity field and steady-state Ocean Circulation Explorer (GOCE) satellite data is their combination with local gravity anomalies for geoid and gravity field modeling purposes. The aim of the present paper was the determination of an improved [...] Read more.
One of the main applications of the gravity field and steady-state Ocean Circulation Explorer (GOCE) satellite data is their combination with local gravity anomalies for geoid and gravity field modeling purposes. The aim of the present paper was the determination of an improved geoid model for the wider Hellenic area, using original GOCE SGG data filtered to retain only useful signals inside the measurement bandwidth (MBW) of the satellite. The filtered SGGs, originally at the satellite altitude, were projected to a mean orbit (MO) and then downward continued to the Earth’s surface (ES) in order to be combined with local gravity anomalies. For the projection to an MO, grids of disturbing gravity gradients from a global geopotential model (GGM) were used, computed per 1 km from the maximum satellite altitude to that of the MO. The downward continuation process was then undertaken using an iterative Monte Carlo (MC) simulated annealing method with GGM gravity anomalies on the ES used as ground truth data. The final geoid model over the wider Hellenic area was estimated, employing the remove–compute–restore method and both Fast Fourier Transform (FFT) and Least Squares Collocation (LSC). Gravity-only, GOCE-only and combined models using local gravity and GOCE data were determined and evaluation of the results was carried out against available GNSS/levelling data in the study area. From the results achieved, it was concluded that even when FFT is used, so that a combined grid of local gravity and GOCE data is used, improvements to the differences regarding GNSS/levelling data by 14.53% to 27.78% can be achieved. The geoid determination with LSC was focused on three different areas over Greece, with different characteristics in the topography and gravity variability. From these results, improvements from 14.73%, for the well-surveyed local data of Thessaly, to 32.88%, over the mountainous area of Pindos, and 57.10% for the island of Crete for 57.10% were found. Full article
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16 pages, 1298 KiB  
Article
Growth-Promoting and Protective Effect of Trichoderma atrobrunneum and T. simmonsii on Tomato against Soil-Borne Fungal Pathogens
by Dimitrios Natsiopoulos, Apostolos Tziolias, Ioannis Lagogiannis, Spyridon Mantzoukas and Panagiotis A. Eliopoulos
Crops 2022, 2(3), 202-217; https://doi.org/10.3390/crops2030015 - 29 Jun 2022
Cited by 29 | Viewed by 5879
Abstract
Trichoderma fungi are promising candidates for biocontrol agents and plant growth promoters. Trichoderma atrobrunneum and T. simmonsii were evaluated for the control of soil-borne phytopathogenic fungi, in the present study. Dual culture tests with Rhizoctonia solani and Fusarium oxysporum f. sp. lycopersici were [...] Read more.
Trichoderma fungi are promising candidates for biocontrol agents and plant growth promoters. Trichoderma atrobrunneum and T. simmonsii were evaluated for the control of soil-borne phytopathogenic fungi, in the present study. Dual culture tests with Rhizoctonia solani and Fusarium oxysporum f. sp. lycopersici were used to conduct in vitro evaluation. In the presence of Trichoderma, phytopathogen’s growth rate was inhibited up to 59.70% for R. solani and 42.57% for F. oxysporum. Greenhouse trials with potted tomato plants demonstrated that Trichoderma caused a significant increase of stem height and fresh stem weight in pathogen-inoculated plants, compared with the negative control (plants artificially inoculated with the phytopathogen only). Except for T. simmonsii, plant growth was not significantly enhanced by a Trichoderma presence in the positive control (healthy plants). The overall performance of the two Trichoderma species studied was equivalent to that of the T. harzianum T22 commercial strain. All the tested species were found to be effective in suppressing colony growth and disease development of the soil borne pathogens in dual cultures and potted plants, indicating that they could be used as biocontrol agents. Our findings are discussed in the context of enhancing endophytic microorganisms’ application in crop production systems. Full article
(This article belongs to the Special Issue Molecular Variability of Crop Pathogens)
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20 pages, 23922 KiB  
Article
FIR, IIR and Wavelet Algorithms for the Rigorous Filtering of GOCE SGG Data to the GOCE MBW
by Eleftherios Pitenis, Elisavet Mamagiannou, Dimitrios A. Natsiopoulos, Georgios S. Vergos, Ilias N. Tziavos, Vassilios N. Grigoriadis and Michael G. Sideris
Remote Sens. 2022, 14(13), 3024; https://doi.org/10.3390/rs14133024 - 23 Jun 2022
Cited by 4 | Viewed by 2501
Abstract
Gravity field and steady-state Ocean Circulation Explorer (GOCE) data are strongly affected by noise and long-wavelength errors outside the satellite measurement bandwidth (MBW). One of the main goals in utilizing GOCE data for gravity field modeling is the application of filtering techniques that [...] Read more.
Gravity field and steady-state Ocean Circulation Explorer (GOCE) data are strongly affected by noise and long-wavelength errors outside the satellite measurement bandwidth (MBW). One of the main goals in utilizing GOCE data for gravity field modeling is the application of filtering techniques that can remove gross errors and reduce low-frequency errors and high-frequency noise while preserving the original signal. This paper aims to present and analyze three filtering strategies used to de-noise the GOCE Level 2 data from long-wavelength correlated errors and noise. These strategies are Finite Impulse Response (FIR), Infinite Impulse Response (IIR), and Wavelet Multi-resolution Analysis (WL), which have been applied to GOCE residual second order derivatives of the gravity potential. Several experiments were performed for each filtering scheme in order to identify the ideal filtering parameters. The outcomes indicate that all the suggested filtering strategies proved to be effective in removing low-frequency errors while preserving the signals in the GOCE MBW, with FIR filtering providing the overall best results. Full article
(This article belongs to the Section Earth Observation Data)
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11 pages, 849 KiB  
Entry
Entomopathogenic Fungi: Interactions and Applications
by Spiridon Mantzoukas, Foteini Kitsiou, Dimitrios Natsiopoulos and Panagiotis A. Eliopoulos
Encyclopedia 2022, 2(2), 646-656; https://doi.org/10.3390/encyclopedia2020044 - 24 Mar 2022
Cited by 49 | Viewed by 21715
Definition
Entomopathogenic fungi are a special group of soil-dwelling microorganisms that infects and kills insects and other arthropods through cuticle penetration. They are currently used as biocontrol agents against insect plant pests and play a vital role in their management. Regardless that entomopathogenic fungi [...] Read more.
Entomopathogenic fungi are a special group of soil-dwelling microorganisms that infects and kills insects and other arthropods through cuticle penetration. They are currently used as biocontrol agents against insect plant pests and play a vital role in their management. Regardless that entomopathogenic fungi are currently on the agriculture market, their full potential has not yet been utterly explored. Up to date substantial research has covered the topic revealing numerous uses in pest management but also on their ability as endophytes, assisting the plant host on growth and pathogen resistance. This article addresses the literature on entomopathogenic fungi through the years, noting their mode of action, advantages, potential applications, and prospects. Full article
(This article belongs to the Collection Encyclopedia of Fungi)
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