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Authors = Biswajit Paul

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17 pages, 2813 KiB  
Article
Carbon Stock Assessment in Natural Forests and Plantations Using Geo-Informatics in Manipur, Northeast India
by Hungyo Wungshap, Ashish Paul, Reetashree Bordoloi, Biswajit Das, Uttam Kumar Sahoo, Shri Kant Tripathi, Jimmy Yebjeny Yumnam, Om Prakash Tripathi, Prakash Kumar Sarangi, Piotr Prus and Florin Imbrea
Agronomy 2023, 13(8), 2023; https://doi.org/10.3390/agronomy13082023 - 30 Jul 2023
Cited by 2 | Viewed by 3336
Abstract
Uncertainties continue to prevail in the potential of natural forests and plantations in carbon stock assessment. The present study was carried out to assess the carbon stock in natural and plantation forests of Manipur using geo-informatics in Imphal East and West districts. The [...] Read more.
Uncertainties continue to prevail in the potential of natural forests and plantations in carbon stock assessment. The present study was carried out to assess the carbon stock in natural and plantation forests of Manipur using geo-informatics in Imphal East and West districts. The integrated approach of geospatial technology, along with field inventory based data, was used in spatial modeling of biomass carbon of selected natural and plantation forests. The stand density was similar for both LNG and TRS forests (680 individuals ha−1) and lowest for KHP forest (640 individuals ha−1). Paulownia fortunei (770 individuals ha−1) showed highest density among tree species while Tectona grandis (54.07 m2 ha−1) followed by Gmelina arborea (42.18 m2 ha−1) had higher basal area compared to other tree species. The soil moisture content (%) in the natural forest ranged from 19.13 ± 0.47 to 26.9 ± 0.26%. The soil moisture content in the plantation forest ranged from 19.16 ± 0.98 to 25.83 ± 0.06%. The bulk density of natural forests ranged from 1.27 g cm−3 to 1.37 g cm−3 while for plantation forests it ranged from 1.18 g cm−3 to 1.34 g cm−3. Among the studied sites of natural forest, TRS forest had both the highest AGBC value of 132.74 t ha−1 as well as the BGBC value of 38.49 t ha−1. Similarly, among the plantations, T. grandis plantation showed the highest AGBC (193 t ha−1) and BGBC (55.97 t ha−1). On the other hand, Tharosibi forest and T. grandis plantation had the highest total carbon stock for natural and plantation forest with values of 274.824 t ha−1 and 390.88 t ha−1, respectively. The total above-ground carbon stock estimated for the natural forest of KHP, LNG and TRS were 109.60 t ha−1, 79.49 t ha−1 and 132.74 t ha−1, respectively. On the other hand, the estimated total above-ground carbon stock in plantation of GA, PD, PF and TG were 62.93 t ha−1 62.81 t ha−1, 45.85 t ha−1 and 193.82 t ha−1. In the present study, the relationship with the biomass was observed to be better in SAVI compared to NDVI and TVI. The linear regression analysis performed to determine the relationship between the estimated and predicted biomass resulted in a correlation coefficient of R2 = 0.85 for the present study area, which is an indication of a good relationship between the estimated and predicted biomass. Full article
(This article belongs to the Special Issue Sustainable Management and Tillage Practice in Agriculture)
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18 pages, 2877 KiB  
Article
Effects of Crude Oil Price Shocks on Stock Markets and Currency Exchange Rates in the Context of Russia-Ukraine Conflict: Evidence from G7 Countries
by Bhaskar Bagchi and Biswajit Paul
J. Risk Financial Manag. 2023, 16(2), 64; https://doi.org/10.3390/jrfm16020064 - 23 Jan 2023
Cited by 39 | Viewed by 19869
Abstract
The present study examines the effects of the steep surge in crude oil prices which has also been considered as an oil price shock on the stock price returns and currency exchange rates of G7 countries, namely Canada, France, Germany, Italy, Japan, the [...] Read more.
The present study examines the effects of the steep surge in crude oil prices which has also been considered as an oil price shock on the stock price returns and currency exchange rates of G7 countries, namely Canada, France, Germany, Italy, Japan, the United Kingdom (UK) and the United States (US), in the context of the Russia–Ukraine conflict. Due to the outbreak of the war, the steep surge in Brent crude oil price returns is seen as an exogenous shock to stock price returns and exchange rates during the period from 2 January 2017 to 29 June 2022. The paper applies the Fractionally Integrated GARCH (FIGARCH) model to capture the effect of the crude oil price shock and the Breakpoint unit root test to examine the structural breaks in the dataset. Structural breakpoints in the dataset for the entire stock price returns and exchange rates are observed during the period commencing from the last week of February, 2022, to the last week of March, 2022. Except for TSX, NASDAQ and USD, noteworthy long memory effects running from Brent crude oil price to all the stock price returns along with the currency exchange rates for all G7 countries were also found. Full article
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40 pages, 6493 KiB  
Review
Role of Artificial Intelligence in Radiogenomics for Cancers in the Era of Precision Medicine
by Sanjay Saxena, Biswajit Jena, Neha Gupta, Suchismita Das, Deepaneeta Sarmah, Pallab Bhattacharya, Tanmay Nath, Sudip Paul, Mostafa M. Fouda, Manudeep Kalra, Luca Saba, Gyan Pareek and Jasjit S. Suri
Cancers 2022, 14(12), 2860; https://doi.org/10.3390/cancers14122860 - 9 Jun 2022
Cited by 88 | Viewed by 9443
Abstract
Radiogenomics, a combination of “Radiomics” and “Genomics,” using Artificial Intelligence (AI) has recently emerged as the state-of-the-art science in precision medicine, especially in oncology care. Radiogenomics syndicates large-scale quantifiable data extracted from radiological medical images enveloped with personalized genomic phenotypes. It fabricates a [...] Read more.
Radiogenomics, a combination of “Radiomics” and “Genomics,” using Artificial Intelligence (AI) has recently emerged as the state-of-the-art science in precision medicine, especially in oncology care. Radiogenomics syndicates large-scale quantifiable data extracted from radiological medical images enveloped with personalized genomic phenotypes. It fabricates a prediction model through various AI methods to stratify the risk of patients, monitor therapeutic approaches, and assess clinical outcomes. It has recently shown tremendous achievements in prognosis, treatment planning, survival prediction, heterogeneity analysis, reoccurrence, and progression-free survival for human cancer study. Although AI has shown immense performance in oncology care in various clinical aspects, it has several challenges and limitations. The proposed review provides an overview of radiogenomics with the viewpoints on the role of AI in terms of its promises for computational as well as oncological aspects and offers achievements and opportunities in the era of precision medicine. The review also presents various recommendations to diminish these obstacles. Full article
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13 pages, 1363 KiB  
Article
Studies of Infection and Experimental Reactivation by Recombinant VZV with Mutations in Virally-Encoded Small Non-Coding RNA
by Punam Bisht, Biswajit Das, Tatiana Borodianskiy-Shteinberg, Paul R. Kinchington and Ronald S. Goldstein
Viruses 2022, 14(5), 1015; https://doi.org/10.3390/v14051015 - 10 May 2022
Viewed by 2306
Abstract
Locked-nucleotide analog antagonists (LNAA) to four varicella zoster virus small non-coding RNA (VZVsncRNA 10–13) derived from the mRNA of the open reading frame (ORF) 61 gene individually reduce VZV replication in epithelial cells and fibroblasts. To study the potential roles VZVsncRNA 10–13 have [...] Read more.
Locked-nucleotide analog antagonists (LNAA) to four varicella zoster virus small non-coding RNA (VZVsncRNA 10–13) derived from the mRNA of the open reading frame (ORF) 61 gene individually reduce VZV replication in epithelial cells and fibroblasts. To study the potential roles VZVsncRNA 10–13 have in neuronal infection we generated two recombinant VZV; one in which 8 nucleotides were changed in VZVsncRNA10 without altering the encoded residues of ORF61 (VZVsnc10MUT) and a second containing a 12-nucleotide deletion of the sequence common to VZVsncRNA12 and 13, located in the ORF61 mRNA leader sequence (VZVsnc12-13DEL). Both were developed from a VZV BAC with a green fluorescent protein (GFP) reporter fused to the N terminal of the capsid protein encoded by ORF23. The growth of both mutant VZV in epithelial cells and fibroblasts was similar to that of the parental recombinant virus. Both mutants established productive infections and experimental latency in neurons derived from human embryonic stem cells (hESC). However, neurons that were latently infected with both VZV mutant viruses showed impaired ability to reactivate when given stimuli that successfully reactivated the parental virus. These results suggest that these VZVsncRNA may have a role in VZV latency maintenance and/or reactivation. The extension of these studies and confirmation of such roles could potentially inform the development of a non-reactivating, live VZV vaccine. Full article
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18 pages, 1529 KiB  
Article
Improvement of Soil Health and System Productivity through Crop Diversification and Residue Incorporation under Jute-Based Different Cropping Systems
by Mukesh Kumar, Sabyasachi Mitra, Sonali Paul Mazumdar, Bijan Majumdar, Amit Ranjan Saha, Shiv Ram Singh, Biswajit Pramanick, Ahmed Gaber, Walaa F. Alsanie and Akbar Hossain
Agronomy 2021, 11(8), 1622; https://doi.org/10.3390/agronomy11081622 - 16 Aug 2021
Cited by 34 | Viewed by 4396
Abstract
Crop diversity through residue incorporation is the most important method for sustaining soil health. A field study was conducted over five consecutive years (2012–2017) to see the impact of residue incorporartions in Inceptisol of eastern India. The main plot treatments had five cropping [...] Read more.
Crop diversity through residue incorporation is the most important method for sustaining soil health. A field study was conducted over five consecutive years (2012–2017) to see the impact of residue incorporartions in Inceptisol of eastern India. The main plot treatments had five cropping systems (CS), namely, fallow−rice−rice (FRR), jute−rice−wheat (JRW), jute−rice−baby corn (JRBc), jute−rice−vegetable pea (JRGp), jute−rice−mustard−mungbean/green gram (JRMMu), which cinsisted of four sub-plots with varied nutrient and crop residue management (NCRM) levels, namely crops with no residue +75% of the recommended dose of fertilizers (RDF) (F1R0), crops with the residue of the previous crops +75% RDF (F1R1), crops with no resiude +100% RDF (F2R0), and crops with residue +100% RDF (F2R1). The highest system productivity was obtained for JRBc (15.3 Mg·ha−1), followed by JRGp (8.81 Mg·ha−1) and JRMMu (7.61 Mg·ha−1); however, the highest sustainability index was found with the JRGp cropping system (0.88), followed by JRMMu (0.82). Among the NCRMs, the highest productivity (8.78 Mg·ha−1) and sustainability index (0.83) were recorded in F2R1. Five soil parameters, namely, bulk density, available K, urease activity, dehydrogenase activity, and soil microbial biomass carbon (SMBC), were used in the minimum data-set (MDS) for the calculation of the soil quality index (SQI). The best attainment of SQI was found in the JRGp system (0.63), closely followed by the JRMMu (0.61) cropping system. Full article
(This article belongs to the Special Issue Cropping Systems and Agronomic Management Practices of Field Crops)
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11 pages, 746 KiB  
Article
Aeromonas hydrophila OmpW PLGA Nanoparticle Oral Vaccine Shows a Dose-Dependent Protective Immunity in Rohu (Labeo rohita)
by Saurabh Dubey, Kiran Avadhani, Srinivas Mutalik, Sangeetha Madambithara Sivadasan, Biswajit Maiti, Joydeb Paul, Shivani Kallappa Girisha, Moleyur Nagarajappa Venugopal, Stephen Mutoloki, Øystein Evensen, Indrani Karunasagar and Hetron Mweemba Munang’andu
Vaccines 2016, 4(2), 21; https://doi.org/10.3390/vaccines4020021 - 1 Jun 2016
Cited by 68 | Viewed by 9759
Abstract
Aeromonas hydrophila is a Gram-negative bacterium that causes high mortality in different fish species and at different growth stages. Although vaccination has significantly contributed to the decline of disease outbreaks in aquaculture, the use of oral vaccines has lagged behind the injectable vaccines [...] Read more.
Aeromonas hydrophila is a Gram-negative bacterium that causes high mortality in different fish species and at different growth stages. Although vaccination has significantly contributed to the decline of disease outbreaks in aquaculture, the use of oral vaccines has lagged behind the injectable vaccines due to lack of proven efficacy, that being from primary immunization or by use of boost protocols. In this study, the outer membrane protein W (OmpW) of A. hydrophila was cloned, purified, and encapsulated in poly d,l-lactide-co-glycolic acid (PLGA) nanoparticles (NPs) for oral vaccination of rohu (Labeo rohita Hamilton). The physical properties of PLGA NPs encapsulating the recombinant OmpW (rOmpW) was characterized as having a diameter of 370–375 nm, encapsulation efficiency of 53% and −19.3 mV zeta potential. In vitro release of rOmpW was estimated at 34% within 48 h of incubation in phosphate-buffered saline. To evaluate the efficacy of the NP-rOmpW oral vaccine, two antigen doses were orally administered in rohu with a high antigen (HiAg) dose that had twice the amount of antigens compared to the low antigen (LoAg) dose. Antibody levels obtained after vaccination showed an antigen dose dependency in which fish from the HiAg group had higher antibody levels than those from the LoAg group. The antibody levels corresponded with post challenge survival proportions (PCSPs) and relative percent survival (RPS) in which the HiAg group had a higher PCSP and RPS than the LoAg group. Likewise, the ability to inhibit A. hydrophila growth on trypticase soy agar (TSA) by sera obtained from the HiAg group was higher than that from the LoAg group. Overall, data presented here shows that OmpW orally administered using PLGA NPs is protective against A. hydrophila infection with the level of protective immunity induced by oral vaccination being antigen dose-dependent. Future studies should seek to optimize the antigen dose and duration of oral immunization in rohu in order to induce the highest protection in vaccinated fish. Full article
(This article belongs to the Special Issue Nanoparticles to Co-Deliver Immunopotentiators and Antigens)
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