Integrative Taxonomy Reveals the First Record of Garra substrictorostris Roni & Vishwanath, 2018 (Actinopteri: Cyprinidae) from the Brahmaputra River Drainage, Assam, Northeastern India
Abstract
1. Introduction
2. Materials and Methods
2.1. Study Area and Sample Collection
2.2. DNA Extraction and PCR Amplification
2.3. Molecular Data Analysis
3. Results
3.1. Morphometric Analysis
3.1.1. Diagnosis
3.1.2. Coloration
3.2. Molecular Analysis
3.2.1. NCBI BLAST Analyses
3.2.2. Genetic Divergence
3.2.3. Phylogenetic Analyses
4. Discussion
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| COI | Cytochrome c oxidase subunit I |
| ML | Maximum likelihood |
| DNA | Deoxyribonucleic acid |
| NFW | Nuclease-Free Water |
| PCR | Polymerase Chain Reaction |
| NCBI | National Center for Biotechnology Information |
| ORF | Open Reading Frames |
| BLAST | Basic Local Alignment Search Tool |
| MEGA | Molecular Evolutionary Genetics Analysis |
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| Species | Locality | Specimens Voucher | GenBank Accession Number |
|---|---|---|---|
| Garra lissorhynchus | India | Ga4 | MH156958 |
| Garra lissorhynchus | India | PI5NB | MN996644 |
| Garra lissorhynchus | India | RLM7075 | JX074160 |
| Garra lamta | India | GPCR 145GL | KR809740 |
| Garra lamta | India | GPCR 34GL | KU043345 |
| Garra lamta | India | GPCR 33GL | KU043344 |
| Garra nasuta | India | MzKa-140 | KX399132 |
| Garra nasuta | India | GN-2005 | KU667341 |
| Garra nasuta | India | GN-200 | KU667339 |
| * Garra substricorostrsis | India | DHSR_31 | PV336094 |
| Garra gotyla | India | GOT4 | MK599507 |
| Garra gotyla | India | GG-34 | KF550093 |
| Garra gotyla | India | GRHNBGU32 | PQ732272 |
| Garra quadratirostris | India | GUAP 0021/18 | MN832847 |
| Garra kempi | India | GK3 | MK599485 |
| Garra kempi | India | GK2 | MK599484 |
| Garra kempi | India | GK1 | MK599483 |
| Garra arupi | India | BOF33F | KF511541 |
| Garra arupi | India | BOF32F | KF511540 |
| Garra arupi | India | BOF34F | KF511539 |
| Garra annandalei | India | GAN3 | MK599488 |
| Garra annandalei | India | GAN2 | MK599487 |
| Garra annandalei | India | GAN1 | MK599486 |
| Raiamas bola | Bangladesh | DU6280 | MK572539 |
| Characters | G. substrictorostris (Brahmaputra River Drainage) | Original Description G. substrictorostris (Barak River Drainage) |
|---|---|---|
| Multicuspid tubercles on the Transverse Lobe | 17 | 14–20 |
| Proboscis on Snout | Unilobed | Unilobed |
| Multicuspid tubercles on anterior margin of Proboscis | 5 | 3–5 |
| Multicuspid tubercles on the antero-ventral margin of the Proboscis | 4–6 | 4–6 |
| Tubercles on the lateral surface of the snout | 7–9 | 7–11 |
| Transverse scales rows above the lateral line | 51/2 | 51/2 |
| Transverse scales rows between the lateral line and anal-fin origin | 41/2 | 31/2 or 41/2 |
| Distance between anus and anal fin origin (In % of pelvic-anal distance) | 23.16 (1) or 24.96 (1) | 15–27 |
| Morphometric Measurements | Range | Average | SD |
|---|---|---|---|
| Total length (mm) | 124.10–151.65 | 137.88 | |
| Standard Length (mm) | 101.00–120.50 | 110.75 | |
| (In % of Standard Length) | |||
| Pre-Dorsal Length | 44.16–45.93 | 45.05 | 1.26 |
| Pre-Anal Length | 75.05–82.24 | 78.65 | 5.09 |
| Pre-Pelvic Length | 50.89–54.32 | 52.60 | 2.42 |
| Pre-Pectoral Length | 22.18–22.20 | 22.19 | 0.02 |
| Pre-Anus Length | 67.87–72.70 | 70.28 | 3.41 |
| Pelvic Anal Distance | 24.46–26.93 | 25.69 | 1.75 |
| Dorsal Fin Base Length | 18.52–17.26 | 17.89 | 0.89 |
| Dorsal Fin Height | 26.54–26.85 | 26.69 | 0.22 |
| Anal Fin Base Length | 8.17–8.51 | 8.34 | 0.24 |
| Anal Fin Height | 17.72–20.75 | 19.24 | 2.14 |
| Pelvic Fin Length | 20.40–22.41 | 21.40 | 1.42 |
| Pectoral Fin Length | 22.77–23.03 | 22.90 | 0.18 |
| Caudal Fin Upper Lobe Length | 27.23–31.20 | 29.22 | 2.81 |
| Caudal Fin Lower Lobe Length | 29.41–28.76 | 29.08 | 0.46 |
| Caudal Peduncle Length | 15.42–17.93 | 16.67 | 1.77 |
| Caudal Peduncle Height | 12.67–13.65 | 13.16 | 0.69 |
| Body Depth | 20.55–21.91 | 21.23 | 0.97 |
| Body Width (Anal Ori.) | 8.52–10.54 | 9.53 | 1.43 |
| Body Width (Dorsal Ori.) | 17.28–18.88 | 18.08 | 1.13 |
| Head Depth at Eye | 14.85–15.35 | 15.10 | 0.35 |
| Head Depth at Nape | 16.54–16.76 | 16.65 | 0.16 |
| Head Width (Max) | 18.22–18.09 | 18.16 | 0.09 |
| Head Width (Eye) | 17.43–17.64 | 17.53 | 0.15 |
| Head Length | 24.55–25.35 | 24.95 | 0.56 |
| In % of pelvic-anal distance | |||
| Distance Between the Anus and the Anal Fin Origin | 23.16–24.96 | 24.06 | 1.278 |
| In % Head Length (HL = 24.80) | |||
| Snout Length | 48.79–59.41 | 54.10 | 7.51 |
| Eye Diameter | 20.57–16.53 | 18.55 | 2.85 |
| Interorbital Space | 41.73–45.01 | 43.37 | 2.32 |
| Internarial Space | 28.43–31.42 | 29.93 | 2.12 |
| Central Callous Pad Width | 33.67–32.08 | 32.87 | 1.13 |
| Central Callous Pad Length | 25.40–23.57 | 24.49 | 1.30 |
| Disc Width | 51.61–50.08 | 50.85 | 1.08 |
| Disc Length | 36.49–33.55 | 35.02 | 2.08 |
| MERISTIC DATA | |||
| Present study (From the Manas River of the Brahmaputra drainage) | Original Description (From the Leimatak River of the Barak drainage) | ||
| Dorsal Fin Count | iii, 81/2 | iii, 81/2 | |
| Pectoral Fin Count | i, 15 | i, 15 | |
| Pelvic Fin Count | i, 8 | i, 7 or 8 | |
| Anal Fin Count | iii, 51/2 | iii, 51/2 | |
| Caudal Fin Count | 19 | 19 | |
| Lateral Line Scales | 34 | 33–34 | |
| Pre-Dorsal Scales | 10 | 10 | |
| Species | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 |
|---|---|---|---|---|---|---|---|---|---|
| 1. Garra lamta | 0.0036 | ||||||||
| 2. Garra gotyla | 0.1111 | 0.0009 | |||||||
| 3. Garra nasuta | 0.0991 | 0.0937 | 0.0000 | ||||||
| 4. Garra lissorhynchus | 0.1643 | 0.1380 | 0.1574 | 0.0072 | |||||
| 5. Garra annandalei | 0.1160 | 0.0981 | 0.0943 | 0.1382 | 0.0000 | ||||
| 6. Garra kempi | 0.1203 | 0.0855 | 0.1137 | 0.1559 | 0.1048 | 0.0000 | |||
| 7. Garra arupi | 0.1202 | 0.0976 | 0.1131 | 0.1398 | 0.0961 | 0.0940 | 0.0000 | ||
| 8. Garra quadratirostris | 0.1077 | 0.0812 | 0.1031 | 0.1585 | 0.1077 | 0.1099 | 0.0943 | 0.0000 | |
| 9. Garra substrictorostris | 0.0969 | 0.1062 | 0.0405 | 0.1545 | 0.1068 | 0.1177 | 0.1350 | 0.1248 | 0.0000 |
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Phukan, B.; Kumar, A.P.; Barman, M.; Das, P.; Talukdar, A.; Kalita, R.; Deshmukhe, G.; Tamuli, K.K.; Bhattacharjya, B.K.; Nayak, B.B. Integrative Taxonomy Reveals the First Record of Garra substrictorostris Roni & Vishwanath, 2018 (Actinopteri: Cyprinidae) from the Brahmaputra River Drainage, Assam, Northeastern India. Taxonomy 2025, 5, 69. https://doi.org/10.3390/taxonomy5040069
Phukan B, Kumar AP, Barman M, Das P, Talukdar A, Kalita R, Deshmukhe G, Tamuli KK, Bhattacharjya BK, Nayak BB. Integrative Taxonomy Reveals the First Record of Garra substrictorostris Roni & Vishwanath, 2018 (Actinopteri: Cyprinidae) from the Brahmaputra River Drainage, Assam, Northeastern India. Taxonomy. 2025; 5(4):69. https://doi.org/10.3390/taxonomy5040069
Chicago/Turabian StylePhukan, Bipul, Annam Pavan Kumar, Manabjyoti Barman, Pronob Das, Avinash Talukdar, Rinku Kalita, Geetanjali Deshmukhe, Krishna K. Tamuli, Birendr K. Bhattacharjya, and Binaya Bhusan Nayak. 2025. "Integrative Taxonomy Reveals the First Record of Garra substrictorostris Roni & Vishwanath, 2018 (Actinopteri: Cyprinidae) from the Brahmaputra River Drainage, Assam, Northeastern India" Taxonomy 5, no. 4: 69. https://doi.org/10.3390/taxonomy5040069
APA StylePhukan, B., Kumar, A. P., Barman, M., Das, P., Talukdar, A., Kalita, R., Deshmukhe, G., Tamuli, K. K., Bhattacharjya, B. K., & Nayak, B. B. (2025). Integrative Taxonomy Reveals the First Record of Garra substrictorostris Roni & Vishwanath, 2018 (Actinopteri: Cyprinidae) from the Brahmaputra River Drainage, Assam, Northeastern India. Taxonomy, 5(4), 69. https://doi.org/10.3390/taxonomy5040069

