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Article

Evaluation of the Water Conditions in Coffee Plantations Using RPA

by
Sthéfany Airane dos Santos
1,
Gabriel Araújo e Silva Ferraz
1,*,
Vanessa Castro Figueiredo
2,
Margarete Marin Lordelo Volpato
2,
Marley Lamounier Machado
2 and
Vânia Aparecida Silva
2
1
Department of Agricultural Engineering, Federal University of Lavras, Lavras 37203202, Brazil
2
Agricultural Research Company of Minas Gerais (EPAMIG), Belo Horizonte 31170495, Brazil
*
Author to whom correspondence should be addressed.
AgriEngineering 2023, 5(1), 65-84; https://doi.org/10.3390/agriengineering5010005
Submission received: 22 November 2022 / Revised: 16 December 2022 / Accepted: 21 December 2022 / Published: 29 December 2022
(This article belongs to the Special Issue Sensors and Actuators for Crops and Livestock Farming)

Abstract

:
The objective of this study is to evaluate the water conditions in a coffee plantation using precision agriculture (PA) techniques associated with geostatistics and high-resolution images. The study area is 1.2 ha of coffee crops of the Topázio MG 1190 cultivar. Two data collections were performed: one in the dry season and one in the rainy season. A total of 30 plants were marked and georeferenced within the study area. High-resolution images were obtained using a remotely piloted aircraft (RPA) equipped with a multispectral sensor. Leaf water potential was obtained using a Scholander pump. The spatialization and interpolation of the leaf water potential data were performed by geostatistical analysis. The vegetation indices were calculated through the images obtained by the RPA and were used for a regression and correlation analysis, together with the water potential data. The degree of spatial dependence (DSD) obtained by the geostatistical data showed strong spatial dependence for both periods evaluated. In the correlation analysis and linear regression, only the red band showed a significant correlation (39.93%) with an R² of 15.95%. The geostatistical analysis was an important tool for the spatialization of the water potential variable; conversely, the use of vegetation indexes obtained by the RPA was not as efficient in the evaluation of the water conditions of the coffee plants.

1. Introduction

Within the coffee industry, Brazil stands out as the largest producer in the world, but its productivity is negatively affected by drought [1]. According to [2], water deficit is the main environmental factor affecting agricultural production in Brazil, and short periods of water deficit may be sufficient to reduce coffee production [3].
Of the various parameters related to soil and plants, leaf water potential has been used as a strong indicator for the evaluation of water status [1] and is one of the most important factors affecting stomatal functioning.
When a plant loses water at a rate higher than its absorption and transport capacity, the leaf water potential decreases, leading to stomatal closure and a reduction in photosynthesis [4], thus reducing transpiration rates. The authors of [5] state that the stomatal closure process reduces stomatal conductance (gs), which directly contributes to the increase in or maintenance of water potential within limits that contribute to plant growth.
Leaf water potential has high heterogeneity, requiring the producer to make different decisions for the same area regarding its management. Knowing the spatial and temporal variability of this attribute is of paramount importance in quantifying the water requirements of coffee plants. The modernization of agriculture in the coffee sector is driven by precision agriculture (PA) in coffee plantations [6].
Geostatistics is a tool used in PA to analyze the factors involved in production systems [7]. It allows the identification of whether there is spatial dependence for the analyzed factors, enabling the creation of thematic maps that assist in decision making [7].
The need for a dense sampling grid is a key problem when using geostatistics in agriculture to detect the spatial behavior of these attributes. An alternative tool for geostatistics is the use of remote sensing (RS) in order to assess the spatial variability of attributes related to soil and plants. RS can be divided into two categories: orbital RS and suborbital RS. Despite its diverse applications, orbital remote sensing under field conditions, mainly for small properties, is generally limited mainly due to low spatial resolution, cloud interference and high cost of operation compared to sensors embedded in unmanned aerial vehicles [8,9].
With the emergence of new technologies within agriculture, remotely piloted aircraft (RPA) have emerged as an important suborbital platform for RS. Despite their recent application in coffee farming, RPA have numerous benefits for coffee growers, and the main benefits are a spatial resolution with a very high level of detail and high flexibility regarding temporal resolution.
Multispectral sensors can be coupled to these aircraft, and the use of the most diverse vegetation indices has been shown to be promising for the evaluation of several aspects of crops, including physical characteristics, pests and diseases, and the monitoring of the health of crops by coffee growers.
Some technologies have been tested in precision coffee farming. Emerging applications such as the capture of aerial images by means of RPA are increasingly common in coffee fields, and these include mapping pockets of invasive weeds, revealing irrigation and fertilization anomalies [10], determining the ripeness index of the crop [11,12], detecting faults in the coffee plant [13], improving geometric errors in images obtained by RPA [14], estimating vegetation volume [15], estimating indirect measures in coffee plants [16], evaluating planting quality in high-slope terrain [17], and determining biophysical parameters and measuring the height and diameter of coffee plants [18].
Leaf water potential is an important factor for evaluating the water status of coffee plantations. This factor and the various attributes related to soil and plants show high heterogeneity. However, there are no studies evaluating the spatial and temporal variability of this factor in coffee growing using high-resolution multispectral images. Thus, the objective of this study is to evaluate the spatial and temporal behavior of leaf water potential in coffee plantations through geostatistical analysis and the use of high-resolution images obtained by an RPA.

2. Materials and Methods

2.1. Workflow

The workflow of this research (Figure 1) was divided into four stages, the first stage being associated with the construction of the sampling mesh and georeferencing of the area and points to be collected, and the second stage being defined as the collection of leaves from the georeferenced plants to obtain the water potential. The third step was defined by the execution of the flight with a multispectral sensor coupled to the RPA, and the fourth step was the correlation analysis and linear regression between the leaf water potential and the calculated vegetation indices.

2.2. Description of the Study Area

The study was conducted in a coffee plantation of the Experimental Field of the Minas Gerais Agricultural Research Company (EPAMIG, as abbreviated in Portuguese), located in the municipality of Três Pontas in the southern region of the state of Minas Gerais, Brazil, at an altitude of 905 m and a Universal Transverse Mercator (UTM) coordinate system position of S 7640030.4 and E 449531.5, Zone 23K. This municipality has an average annual temperature of 20.3 °C and an average annual rainfall of 1429 mm. The soil in this area is classified as oxisol.
The area of the experiment comprised 1.2 ha of a coffee plantation of the species Coffea arabica L. of the Topázio MG 1190 cultivar. This crop was established in 1998 with spacings between rows of 3.70 m and between plants of 0.70 m (Figure 2).

2.3. Sampling Grid

The sampling grid was prepared with QGIS software, version 3.4.8, and 30 sampling points representing a sampling density of 25 points per hectare were laid out (Figure 3). The contouring of the area and the georeferencing of the sampling points were performed using a TRIMBLE RTK Model R8 global navigation satellite system (GNSS).
The sampling grid considered the cartographic projection of UTM Zone 23 K and WGS 84 DATUM, which consisted of 30 sampling points, with each point represented by a plant that was duly numbered and marked with zebra tape. Two field data collections were performed, one in the dry season on 11 August 2020 and the other in the rainy season on 27 January 2021. Collections were performed to evaluate the water status of the crop in these two periods.
Table 1 shows the climatological data for both collection dates. These data came from the meteorological station of a farm 15 km away from the EPAMIG experimental field in Três Pontas. These climatological data were obtained from the database of the system of the Regional Cooperative of Coffee Growers in Guaxupé LTDA (COOXUPÉ, as abbreviated in Portuguese).

2.4. Leaf Water Potential Collection

Scholander’s pressure pump method was used to collect leaf water potential [19]. The collections were carried out around 4:30 in the morning. A total of 90 leaves were collected, with 3 leaves from each georeferenced plant. These leaves were collected from the middle third of each plant. Each set of 3 leaves was stored in a plastic bag that was properly closed and contained the number of the georeferenced plant.
The leaf water potential was assessed using the Scholander pressure bomb immediately after collection from each georeferenced plant (Figure 4).
This method consists of placing the leaf inside a cylinder so that its petiole stays out by passing it through a small rubber-coated hole in a gas-proof lid. Pressure is gradually supplied to the cylinder chamber until the first sign that the sap is being forced out of the exposed end of the petiole; this is when the gas injection (inert nitrogen) should be interrupted and the manometer should be read. The value on the manometer represents the xylem pressure potential in MPa (megapascals), where the solute or osmotic potential is considered negligible.

2.5. Geostatistical Analysis

Semivariograms were used to analyze the spatial dependence of the leaf water potential. The semivariance is classically estimated by Equation (1) according to [20]:
γ ^   h = 1 2   N h   i = 1 N i = h [ Z   ( x i ) Z   x i + h ] ²
where N(h) is the number of experimental pairs of observations Z(xi) and Z(xi + h), separated by a distance h. The semivariogram is represented by the graph γ ^ (h) versus h. From the fitting of a mathematical model to the calculated values of γ ^ (h), the coefficients of the theoretical model are estimated for the semivariogram, called the nugget effect (C0), sill (C0 + C1), and range (a), as described by [21].
For this study, the ordinary least squares (OLS) method and spherical, exponential, and Gaussian models were used. These models were chosen according to the fit presented for each attribute studied. To verify whether the fits for each model meet the requirements of cross-validation, the mean error (ME) was calculated according to [22]. The ME should have the closest possible value to zero.
With the adjustment of the semivariograms, after the identification of the spatial variability, the data were interpolated by ordinary kriging. Thus, the variable was estimated in places where it was not sampled, which allowed us to visualize its distribution in space in the form of thematic maps.
The calculation of the degree of spatial dependence (DSD) of the variables followed the classification proposed by [23]. In this classification, the authors point out that there is strong spatial dependence when the semi variogram shows a nugget effect equal to or less than 25% of the sill, moderate spatial dependence when this ratio is between 25% and 75%, and weak spatial dependence when it is greater than 75%.
The geoR package installed in the free statistical software R was used for geostatistical analysis and for the creation of the thematic maps [24].

2.6. Image Acquisition and Processing

The set of images was acquired using a senseFly model EBee SQ remotely piloted aircraft. This aircraft has the following characteristics: fixed wing, wingspan of 110 cm, nominal radio range of 3 km, cruising speed of 40–110 km/h, wind resistance of up to 45 km/h (12 m/s), electric motor, maximum payload of 1.1 kg (including camera and batteries), and a flight autonomy of up to 55 min.
The aircraft was equipped with a Parrot camera (Sequoia model) with a high-resolution red–green–blue (RGB) sensor with a focal length of 4.88 mm. This camera also has four monochromatic sensors for the spectral bands: green (550 ± 40 nm), red (660 ± 40 nm), near infrared (NIR) (790 nm ± 40 nm), and red edge (735 ± 40 nm). The resolution is 1280 × 960, with a pixel size of 3.75 μm and focal length equal to 3.98 mm; the ground sample distance (GSD) is 6.8 cm at a flight height of 50 m (above ground level—AGL), which was adopted for the study described.
In addition to the RGB and monochromatic sensors, the Sequoia has a luminosity sensor to correct the influence of the sun by obtaining data with radiometric corrections. This sensor records not only the current lighting, but also the location of the center of the photo and inertial data.
The planning and execution of the flight was performed through the base station, which was developed by the same aircraft manufacturer (senseFly) with the following set: the software eMotion, responsible for the flight scheduling and execution of the aircraft path, and a transmitting antenna allowing the real-time monitoring of the overflight, as well as the sending of landing commands, changes in direction, and acquisition of images. The flight plan followed the parameters shown in Table 2.
Image processing was performed using the software Pix4DMapper. Digital processing consisted of phototriangulation of the image blocks, with obtainment of the exterior and interior orientation parameters of the images, generation of the point cloud, production of the digital surface model (DSM), and generation of the orthomosaic. Five control points were distributed evenly throughout the property to perform the phototriangulation of the images. The points were surveyed with the aid of a Trimble R8 model GNSS of dual frequency in real-time kinematic (RTK) mode with an accuracy of less than 1 mm in a 1 Hz band.
Next, the radiometric correction of the orthomosaics was performed, i.e., the conversion of the values into digital numbers (DNs) for the surface reflectance. This processing was also performed in Pix4DMapper, with resources from Parrot Sequoia. Before the flight, the radiometric calibration of the camera was performed using a reference plate. By using the values of this plate, the software can calibrate and correct the reflectance of the image considering the lighting characteristics at the time of flight.

2.7. Vegetation Indices

Table 3 shows the vegetation indices that were calculated from the high-resolution spectral bands obtained by the multispectral sensor coupled to the RPA.

2.8. Correlation Analysis and Linear Regression

To identify the vegetation indices with the best correlation with the water potential attribute, data correlation and linear regression techniques were performed where the correlation summarized the degree of the relationship between two variables (X and Y, for example). Conversely, regression results in a mathematical equation describing the relationship between variables.
To perform the simple linear regression, the samples extracted from each index (containing the mean reflectance value of each point) were used as the dependent variable, and the independent variables were represented by the water potential data of the leaves collected in the field.
To collect the dependent variables, polygonal samples were taken from the georeferenced points. These polygons were constructed with a buffer, i.e., each sample had a radius of 0.20 m (20 cm). Samples were obtained using the zonal statistics tool, which calculates the mean reflectance value of pixels within a polygon. For each georeferenced point, 30 mean reflectance values were obtained for each vegetation index studied.
The mean value of each point and each calculated index was exported to a table in which linear regression operations were performed using the Excel program, and the values of the Pearson correlation coefficient (R) and coefficient of determination were obtained, in addition to the F hypothesis tests, to test the significance of each hypothesis. Considering that Ho: ρ = 0, the hypotheses used in this research were:
Hypothesis 0 (H0).
ρ = ρ0 null hypothesis;
Hypothesis 1 (H1).
ρ ≠ ρ0 alternative hypothesis.
The correlation between the variables is given by the linear coefficient of Person (R) calculated from Equation (2). The value of R is always in the range of −1 to 1.
R = n i = 1 n x i y i i = 1 n x i i = 1 n y i n i = 1 n x i ² ( i = 1 n x i ) ²   n i = 1 n y i ² ( i = 1 n y i ) ²
The interpretation of Pearson’s correlation coefficient is described in Table 4.
The relationship between these variables is represented by a mathematical model, that is, an equation that associates the dependent variable with the independent variables. The model is called simple linear regression. From the linear regression, the determination coefficient is obtained, which is expressed by Equation (3).
R 2 = y ^ i y ² y i y ¯ ² = v a r i a t i o n   e x p l a i n e d   b y   t h e   m o d e l t o t a l   v a r i a t i o n
The coefficient of determination is a descriptive measure of the proportion of variation in the independent variable that can be explained by variations in the dependent variable according to the specified regression model. The closer the coefficient of determination is to 1, the better the degree of explanation of the variation in Y as a function of the variable X. It is always a positive measure and is obtained in simple linear regression by increasing the squared Pearson’s correlation coefficient.
The F test of hypotheses at the 95% confidence level was used to determine whether the variability between the group means was greater than the variability of the observations within the groups. If this proportion is sufficiently large, it can be concluded that not all means are equal.

3. Results

3.1. Hydrological Conditions

Figure 5a,b represent the graphs containing the climate data during the interval that precedes the collections in the dry period (May 2020) until the collection of the rainy period (January 2021). Figure 5a represents the precipitation and deficit data for the municipality of Três Pontas, as well as the average leaf water potential data obtained in the two field collections (August 2020 and January 2021), and to complement these data, the mean of historical series of precipitation and deficit were added. Figure 5b represents the temperature distribution graph (mean, maximum, minimum and historical average temperature 1991–2021) within the range from May 2020 to January 2021.

3.2. Descriptive Statistic

The descriptive statistics of leaf water potential (Ψw, in MPa) are shown in Table 5. The first indicators of data heterogeneity are high values of the coefficient of variation (CV). The authors of [39] state that the variability of an attribute can be classified according to the magnitude of its CV, which according to the authors is low when it is less than 10%; moderate when it is in the range between 10 and 20%; high when it is between 20 and 30%; and very high when it is above 30%.

3.3. Geostatistical Analysis

Table 6 shows the adjustment parameters of the semivariograms. Of the evaluated models (spherical, exponential, and gaussian), the spherical semivariogram model had the lowest ME for both evaluated periods; thus, it was the fit model chosen. The authors of [40] state that there is a predominance of the spherical mathematical model for studies in soil science.
The leaf water potential had a range of 15 m for both the sampling in the dry season and the sampling in the rainy season, i.e., Ψw had a similar area of influence for both sampling periods. According to the classification of [23], the variable Ψw showed a strong degree of dependence for both periods evaluated. The semivariograms fitted for the water potential variable are shown in Figure 6a,b.
Figure 7a,b represent the spatial variability maps of Ψw made by kriging interpolation.

3.4. Regression and Correlation Analysis

The morphophysiological responses of plants under stress conditions alter the optical properties of coffee plants and the reflectance patterns of the leaves and canopies. Researchers in the areas of orbital RS have developed studies to evaluate water stress in coffee plantations [41,42].
Ref. [43] state that agricultural sectors have widely used RPA for conveniently and efficiently detecting water stress. The evaluation of water stress using vegetation indices obtained by high-resolution images is found in the studies of [44,45,46,47]. These authors state that the use of high-resolution images with the application of vegetation indices is a valuable tool for evaluating water stress in crops, but none of these studies evaluated water deficit in coffee plantations.
A linear regression and correlation analysis was performed to evaluate the relationship between the leaf water potential collected in the field and the values obtained by calculating the 15 vegetation indices and the 4 bands obtained by the multispectral sensor. Table 7 shows the Pearson correlation analyses between the mean of the samples collected from the multispectral bands (red, NIR, red edge, and green) and the vegetation indices in relation to the data collected in the field for the dry season and rainy season. An F test of the hypotheses was performed to evaluate the significance of the correlation at a level of 0.05 (5%).
During the dry season, no correlations were found between water potential in relation to the multispectral bands and the vegetation indices for the vegetation samples using the F test for the hypotheses. For the rainy season, there was a significant correlation of 0.3993 (39.93%) between the water potential and the multispectral red band.
Through the significant correlation presented by the red band and the water potential variable, the parameters of the linear equation obtained by the analysis of variance are represented in Table 8 and indicate an R² value of 0.1595 or 15.95%.
Figure 8 shows the RGB orthomosaic of the study area obtained for both the dry season (Figure 8a) and the rainy season (Figure 8b). The crop shows very distinct visual characteristics; there is a greater presence of dust on the coffee plant in the dry season, and there is a green, clean, and vigorous plant in the rainy season.
From the verification of the significant correlations between leaf water potential and the vegetation indices, Figure 9a,b represent the maps of the red multispectral band for both the dry and rainy periods, in which there was a significant correlation with the water potential data collected in the field.
This spectral band ranged from the lowest value of 0.01 to the highest value of 0.37; for the dry season, there was a greater predominance in the range of 0.01 to 0.13, and for the rainy season, the highest predominance was in the value of 0.01.
Visually, this band did not present very different characteristics from one period to another; a common characteristic between them occurred at the border of the area, where there were some points where the band had a reflectance value of 0.25.

4. Discussion

4.1. Variation in Climatic Conditions and Descriptive Analysis of Leaf Water Potential

Evaluating the climate variation within the period from May 2020 to January 2021 (Figure 5a), it is observed that in the interval comprising the dry period (May 2020 to August 2020), precipitation was lower and the deficit was greater in relation to the data presented by the historical series, which justifies the low values of leaf water potential. Within the range from November 2020 to January 2021 (rainy period), only the month of December presented precipitation greater than that established for the historical series, and within this period there were no deficits.
The average monthly temperatures from May 2020 to January 2021 were higher than the averages presented by the historical series (Figure 5b) with the exception of the month of May. The relationship between temperature and precipitation influences the evapotranspiration of the coffee tree and can be evaluated by calculating the climatological water deficit; it is observed that the accumulated water deficit for this period from May 2020 to January 2021 was 336 mm, and the month that presented the greatest water deficit was the month of September, which is justified by the second highest average temperature of the period (May 2020 to January 2021) behind only the month of December.
For the dry season, Ψw had a CV of 53%, and for the rainy season it had a CV of 17%, presenting very high and moderate heterogeneity, respectively, according to the criteria of [39]. Taking into account the negative sign for the water potential reading in MPa, the lowest value occurred in the dry season (−3.3 MPa), whereas the highest value occurred in the rainy season (−0.3 MPa). The leaf water potential showed mean values of −1.45 MPa for the dry season and −0.59 MPa for the rainy season. In [48], water potential values between −1.5 MPa and −3.0 MPa represent moderate and severe water deficits, respectively.
Thus, the mean water potential values collected in the dry and rainy periods were not within the water deficit interval. Statements by [49,50] indicate maximum values of −1.5 MPa for coffee plants without irrigation in the field under normal climate conditions, suggesting that this is a limiting value for the nonoccurrence of physiological disturbances in the plant under normal cultivation conditions.
The moderate water-deficit severity reflected in the water potential for the dry period may be related to the absence of rainfall in this period, as observed in Table 1, where the last 20 mm rainfall occurred 74 days (31 May 2020) before the date of sample collection. The highest values of this attribute evaluated in the rainy season were observed when there was a 115 mm rainfall seven days before the date of sample collection.
Some authors have presented water potential results similar to those found in this study. For example, Ref. [51] found a mean water potential value of–1.17 MPa for the cultivar of the current study (Topázio MG 1190); Ref. [51] found mean water potential values of −1.25 MPa; and the mean value was −0.79 MPa for a coffee cultivation area during the rainy season, which was below the severity interval mentioned by [52], as occurred in this study.

4.2. Geostatistical Analysis

Leaf water potential for the dry season (Figure 7a) ranged from the lowest value of −3.2 MPa to the highest value of −0.7 MPa; the predominance of water potential for this period was in the range between −1.7 and −1.2 MPa (tones from creamy yellow to light orange), with part of these values belonging to the range of severity of moderate water deficit [48]. The lowest values, in the range of −3.2 to −2.7 MPa, were observed northwest of the area (shades from blue to green). The leaf water potential for the rainy season (Figure 7b) ranged from the lowest value (−0.8 MPa) to the highest value (−0.3 MPa) and, according to [53], this range was within the range in which plants do not present water deficit.

4.3. Regression and Correlation Analysis

The morphophysiological responses of plants under stress conditions alter the optical properties of coffee trees and the reflectance patterns of leaves and canopies. Researchers in the areas of orbital remote sensing have developed work to assess water stress in coffee growing [41,42].
By identifying water balance variables and their relationship between vegetation indices obtained by the MODIS sensor (Terra satellite) for coffee growing, Ref. [40] evaluated the NDVI and EVI vegetation indices obtained by the MODIS sensor (Terra satellite). The authors claim that the relationships between climate–topological water balance variables and vegetation indices were verified, but with weak statistical correlation.
Aiming to estimate the water potential of the leaf through the evaluation of vegetation indices calculated through Landsat−8 images, [41] states that a quadratic algorithm that uses the Normalized Difference Vegetation Index (NDVI) performed better, showing a correlation coefficient (R²) of 0.82.
The authors [43] state that agricultural sectors have used RPA widely for convenience and efficiency in detecting water stress.
Preparing a literature review, Ref. [44] valuated the application of different types of RPA and remote sensors and compared their performance with field truth for different crops. The results of this review indicate that the NDVI, TCARI/OSAVI and PRI showed positive correlations related to water stress.
The authors of [45] assessed the prospects for improving agricultural and water productivity through remotely piloted aircraft. The authors aimed to build a literature review where they summarized the use of RPA in smallholder agriculture in developing countries. The review highlights the role of the NDVI index obtained by RPA in assessing crop health, evapotranspiration, water stress and disaster risk reduction. Based on the results, the authors state that water stress indices (CWSI and WDI) provide a better option for agricultural water management and adaptation to climate change.
The authors of [46], using images from a remotely piloted aircraft equipped with a multispectral sensor, aimed to identify water stress in maize under different levels of irrigation. Through high-resolution multispectral images, the authors found nine vegetation indices to be related to water stress. Based on the results, the authors observed R² values of 0.47 and 0.50 for TCARI/RDVI and TCARI/SAVI in the reproductive and maturation stages, respectively, and 0.81 and 0.80 for TCARI/RDVI and TCARI/SAVI in the late reproductive and maturation stages, respectively.
The authors of [47] investigated whether the water deficit index (WDI) based on images from remotely piloted aircraft could provide accurate maps of water stress in crops at different stages of growth. For this study, the author evaluated two crops grown with spring barley using thermal and RGB cameras, which were mounted in the RPA. Based on the results, the authors concluded that WDI maps can potentially serve as water stress maps.
The authors mentioned above highlight in their studies the various applications of RPAs in agriculture as well as the assessment of water stress in different crops, but during the development of this work, no study was found that assessed water stress in coffee crops through high-resolution images.
Despite the positive correlation between leaf water potential and the red spectral band, the R² value was not significant (0.1595). A justification for this fact is the difference between data collection methodologies. Three leaves were collected from each georeferenced plant to determine the water potential obtained in the field, and were subjected to the Scholander pressure bomb. Regarding the sampling performed to obtain the vegetation indices, polygons 20 cm in diameter whose perimeter contained more than three leaves of coffee plants were sampled; this perimeter may contain healthy and unhealthy leaves, which directly interferes with the mean values and does not follow a specific sampling pattern, as is the case of field sampling.
Another justification for the results presented in this study may be linked to the dust layer present on the coffee plant in the dry period. The dust layer directly affects the reflectance value of the multispectral bands, serving as a basis to calculate the vegetation indices and to estimate water potential using the Scholander pressure bomb, which requires that clean leaves are inserted in the pressure chamber, i.e., these leaves did not represent the actual field conditions under which the images were captured by the sensor coupled to the RPA.

5. Conclusions

The water potential variable showed the spatial variability structure through the calculation of the CV. In turn, the geostatistical analysis showed that the degree of spatial dependence was strong for both periods evaluated. In the correlation analysis between water potential, multispectral bands and vegetation indices, only the red band evaluated in the rainy season showed a significant correlation at 0.3993 (39.93%). Even with a significant correlation between the water potential and the red band for the rainy season, the R² value was low (15.95%) in the linear regression analysis.
The use of the geostatistical tool was efficient for evaluating the spatiotemporal behavior of the water potential variable. Conversely, the use of high-resolution images to evaluate the water conditions of coffee plantations requires better studies, especially regarding sampling, to make this tool more efficient in monitoring and detecting the variability of water conditions and to aid producers in their decision-making in relation to management.

Author Contributions

Conceptualization, S.A.d.S., G.A.e.S.F. and V.C.F.; methodology, V.C.F., M.M.L.V. and V.A.S.; software, S.A.d.S. and M.L.M.; validation, G.A.e.S.F., M.L.M. and V.A.S.; formal analysis, S.A.d.S. and G.A.e.S.F.; investigation, S.A.d.S. and G.A.e.S.F.; resources, V.C.F.; data curation, S.A.d.S. and M.L.M.; writing—original draft preparation, S.A.d.S.; writing—review and editing, G.A.e.S.F.; visualization, G.A.e.S.F. and V.C.F.; supervision, V.C.F., M.M.L.V. and V.A.S.; project administration, V.C.F.; funding acquisition, V.C.F. All authors have read and agreed to the published version of the manuscript.

Funding

This work was funded by the Consórcio Pesquisa Café (10.18.20.023.00.00 and 10.18.20.041.00.00). The authors would like to thank the project Consórcio Pesquisa Café, Conselho Nacional de Desenvolvimento Científico e Tecnológico, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior and Fundação de Amparo à Pesquisa do Estado de Minas Gerais, for funding the project and granting scholarships.

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

All relevant data are included in the manuscript.

Conflicts of Interest

The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

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Figure 1. Work flowchart.
Figure 1. Work flowchart.
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Figure 2. Study area located in the municipality of Três Pontas-Minas Gerais, Brazil.
Figure 2. Study area located in the municipality of Três Pontas-Minas Gerais, Brazil.
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Figure 3. Sampling grid for the collection of 30 points from the study.
Figure 3. Sampling grid for the collection of 30 points from the study.
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Figure 4. Obtaining leaf water potential using the Scholander pump.
Figure 4. Obtaining leaf water potential using the Scholander pump.
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Figure 5. Variation in climatic conditions of precipitation and leaf water potential (a) (source: the authors (2022); HP-historical precipitation (mm), HD-historical deficit (mm)) (b) and temperature during the periods from May 2020 to January 2021 in the municipality of Três Pontas (source: the authors (2022); HT-historical temperature (°C).
Figure 5. Variation in climatic conditions of precipitation and leaf water potential (a) (source: the authors (2022); HP-historical precipitation (mm), HD-historical deficit (mm)) (b) and temperature during the periods from May 2020 to January 2021 in the municipality of Três Pontas (source: the authors (2022); HT-historical temperature (°C).
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Figure 6. Semivariograms.
Figure 6. Semivariograms.
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Figure 7. Maps of spatial variability for the variable Ψw (MPa) for the (a) dry and (b) rainy periods.
Figure 7. Maps of spatial variability for the variable Ψw (MPa) for the (a) dry and (b) rainy periods.
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Figure 8. RGB orthomosaics for the (a) dry and (b) rainy periods.
Figure 8. RGB orthomosaics for the (a) dry and (b) rainy periods.
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Figure 9. Red multispectral band for the (a) dry and (b) rainy periods.
Figure 9. Red multispectral band for the (a) dry and (b) rainy periods.
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Table 1. Climatological data for the dates of sample collection.
Table 1. Climatological data for the dates of sample collection.
Collection PeriodMean Monthly Temperature (°C)Date of Last RainfallAmount of Last
Rainfall (mm)
Dry (August 2020)19.331/05/2020 mm
Rainy (January 2021)23.920/01/21115 mm
Source: COOXUPÉ (2020, 2021).
Table 2. Flight planning parameters.
Table 2. Flight planning parameters.
CameraParrot Sequoia
Resolution of the RGB Camera16 megapixels
Resolution of the Multispectral Camera1.2 megapixels
Focal Length3.98 mm
Vertical Cover70%
Horizontal Cover70%
Spatial Resolution6.8 cm
Flight Altitude50 m
Speed12 m/s
Table 3. Vegetation indices calculated from high-resolution images.
Table 3. Vegetation indices calculated from high-resolution images.
IndexAcronymEquationReference
Normalized Difference Vegetation Index NDVI N I R + R E D N I R R E D [25]
Normalized Difference Water indexNDWI G N I R G + N I R [26]
Enhanced Vegetation Index 2EVI2 2.5   N I R R E D N I R + 2.4 R E D + 1 [27]
Normalized Difference Red EdgeNDRE N I R R E D   E d g e N I R + R E D   E d g e [28]
Clorophyll Vegetation Index CVI N I R G R E E N R E D G R E E N [29]
Green Normalized Difference Red EdgeGNDVI N I R G R E E N N I R + G R E E N [30]
Canopy Chlorophyll Content IndexCCCI N D R E N D V I [28]
Green Ratio of Vegetation IndexGRVI N I R G R E E N [31]
Modified Simple RatioMSR N I R R E D 1 N I R R E D + 1 [32]
Infrared Percentage Vegetation Index IPVI NIR NIR + RED [33]
Soil-Adjusted Vegetation Index SAVI 1 + L N I R R E D L + N I R + R E D [34]
Modified Soil-Adjusted Vegetation Index 2MSAVI [ 2 N I R + 1 2 N I R + 1 2 8 N I R R E D 0.5 ] 2 [35]
Optimized Soil-Adjusted Vegetation IndexOSAVI   N I R R E D N I R + R E D + 0.16 [36]
Green Clorophyll IndexCIgreen N I R G R E E N 1 [37]
Red-edge Clorophyll IndexCIrededge N I R R E D   E D G E 1 [37]
Table 4. Interpretation of Pearson’s correlation coefficient.
Table 4. Interpretation of Pearson’s correlation coefficient.
Correlation CoefficientCorrelation
Rxy = 1Perfect Positive
0.8 ≤ Rxy < 1Strong Positive
0.5 ≤ Rxy < 0.8Moderate Positive
0.1 ≤ Rxy < 0.5Weak Positive
0 ≤ Rxy < 0.1Very Weak Positive
0Null
−0.1 ≤ Rxy < 0Very Weak Negative
−0.5 ≤ Rxy < −0.1Weak Negative
−0.8 ≤ Rxy < −0.5Moderate Negative
−1 ≤ Rxy < −0.8Strong Negative
Rxy = −1Perfect Negative
Source: Adapted Ref. [38].
Table 5. Descriptive statistics for the variable Ψw (MPa) for the dry and rainy seasons.
Table 5. Descriptive statistics for the variable Ψw (MPa) for the dry and rainy seasons.
PeriodVariable Descriptive Statistics
MinMaxMdMeanVarSDCV (%)
DryΨw MPa (2020)−3.3−0.51.151.450.610.7853
RainyΨw MPa (2021)−0.8−0.30.60.590.010.1017
Min = minimum value; Max = maximum value; Md = median; Mean = mean; Var = variance; SD = standard deviation; and CV = coefficient of variation (%).
Table 6. Parameters for fitting the spherical and exponential semivariogram models of the variables evaluated by the OLS method.
Table 6. Parameters for fitting the spherical and exponential semivariogram models of the variables evaluated by the OLS method.
VariablePeriodModelC0C1C0 + C1ADSDME
Ψw
(MPa)
DrySph0.100.400.5020.00strong0.00
RainySph0.0115.0015.010.06strong0.00
Table 7. Correlation analysis between the leaf water potential and multispectral bands and vegetation indices.
Table 7. Correlation analysis between the leaf water potential and multispectral bands and vegetation indices.
Spectral Bands and
Vegetation Indices
Ψw (MPa)
DryRainy
RED0.3188 ns0.3993 **
NIR0.0489 ns0.1220 ns
RED EDGE0.1921 ns0.0493 ns
GREEN0.2852 ns0.1424 ns
NDVI0.1768 ns0.3010 ns
NDWI0.0905 ns0.2620 ns
EVI20.0663 ns0.1663 ns
NDRE0.2870 ns0.3263 ns
CVI0.1742 ns0.0865 ns
GNDVI0.0905 ns0.2620 ns
CCCI0.2451 ns0.3356 ns
GVI0.1113 ns0.2691 ns
MSR0.1768 ns0.3010 ns
IPVI0.1768 ns0.0996 ns
SAVI0.0442 ns0.1710 ns
MSAVI0.1012 ns0.1576 ns
OSAVI0.1035 ns0.2090 ns
CI green0.1113 ns0.2691 ns
CI red edge0.2906 ns0.3313 ns
Ψw-water potential; **—significant at the 5% probability level (p < 0.05) and ns—not significant.
Table 8. Linear regression analysis parameters.
Table 8. Linear regression analysis parameters.
VariablePeriodSpectral Band or Indexβ0β1
Ψw (MPa)RainyRED−0.0402−0.01340.1595
Ψw—water potential; β0—intercept; β1—angular coefficient; R²—determination coefficient.
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Santos, S.A.d.; Ferraz, G.A.e.S.; Figueiredo, V.C.; Volpato, M.M.L.; Machado, M.L.; Silva, V.A. Evaluation of the Water Conditions in Coffee Plantations Using RPA. AgriEngineering 2023, 5, 65-84. https://doi.org/10.3390/agriengineering5010005

AMA Style

Santos SAd, Ferraz GAeS, Figueiredo VC, Volpato MML, Machado ML, Silva VA. Evaluation of the Water Conditions in Coffee Plantations Using RPA. AgriEngineering. 2023; 5(1):65-84. https://doi.org/10.3390/agriengineering5010005

Chicago/Turabian Style

Santos, Sthéfany Airane dos, Gabriel Araújo e Silva Ferraz, Vanessa Castro Figueiredo, Margarete Marin Lordelo Volpato, Marley Lamounier Machado, and Vânia Aparecida Silva. 2023. "Evaluation of the Water Conditions in Coffee Plantations Using RPA" AgriEngineering 5, no. 1: 65-84. https://doi.org/10.3390/agriengineering5010005

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