A Genomic Perspective on the Evolutionary Diversity of the Plant Cell Wall
Abstract
:1. Introduction
2. Cell Wall Diversity and Plant Evolution
3. Recent Updates and Developments in the Databases of Plant Genomes and Cell Wall Genes
4. Comparative Plant Genome Analysis of Plants with a View toward Characterizing of Cell Wall Diversity
4.1. Comparative Analysis of the Cell Wall Gene Families among 100 Plant Species
4.2. Identification of Cell Wall Gene Families that Contribute to the Diversity Patterns of Cell Wall Gene Family Members in Plant Linkages
5. Concluding Remarks and Perspectives
Supplementary Materials
Funding
Acknowledgments
Conflicts of Interest
References
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Family | Subfamily | Substrate/Product 1 | Description 1 |
---|---|---|---|
GT2 | |||
CesA | Cellulose | Cellulose synthase | |
CslA, D | Mannan | Mannan synthase | |
CslC | Xyloglucan | Xyloglucan synthase | |
CslF, H, J | (1,3;1,4)-β-d-glucan | (1,3;1,4)-β-d-glucan synthase | |
GT8 | |||
GT8A | Glucuronoxylan | Glucuronoxylan glucuronosyltransferase | |
GT8C | Xylan | Xylan primary oligopolysaccharide synthase | |
GT8D | Xylan | Xylan primary oligopolysaccharide synthase | |
Xylan galacturonosyltransferas | |||
HG 2 | HG galacturonosyltransferase | ||
GT10 | Glycoprotein α-1,3-fucosyltransferase | ||
GT14 | AGP 3 | AGP glucuronosyltransferase | |
GT29 | AGP | AGP galactosyltransferase | |
GT31 | AGP | AGP galactosyltransferase | |
GT34 | Xyloglucan | Xyloglucan α-1,6-xylosyltransferase | |
GT37 | Xyloglucan | Xyloglucan α-1,2-fucosyltransferase | |
AGP | AGP α-1,2-fucosyltransferase | ||
GT43 | Xylan | Xylan xylosyltransfearse | |
GT47 | |||
GT47A | Xyloglucan | Xyloglucan β-1,2-galactosyltransferase | |
GT47B | RGI 4 | RGI arabinosyltransferase | |
GT47C | Xylogalacturonan | Xylogalacturonan β-1,3-xylosyltransferase | |
GT47E | Xylan | Xylan xylosyltransfearse | |
Xylan | Xylan primary oligopolysaccharide synthase | ||
GT48 | Callose | Callose synthase | |
GT61 | Arabinoxylan | Arabinoxylan α-1,3-arabinosyltransferase | |
GT64 | |||
GT68 | |||
GT77 | RGII 5 | RGII α-1,3-d-xylosyltransferase | |
AGP | Arabinofuranosyltransferase | ||
GT92 | RGI | RGI galactosyltransferase | |
GH1 | Mannan | Exo-β-1,4-mannosidase | |
GH3 | β-glucosidase/xylosidase | ||
GH5 | Mannan | Endo-β-mannanase | |
GH9 | Cellulose | β-1,4-glucanase | |
GH10 | Xylan | Endo-β-xylanase | |
GH16 | Xyloglucan | Xyloglucan endotransglucosylase/hydrolase | |
GH17 | Callose | β-1,3-glucanase | |
GH18 | |||
GH19 | Cellulose | ||
GH28 | HG | Polygalacturonase | |
GH31 | Xyloglucan | Xyloglucan α-1,6-xylosidase | |
GH35 | Xyloglucan | Xyloglucan β-1,2-galactosidase | |
GH38 | |||
GH51 | Arabinan | Bifunctionalα-L-arabinofuranosidase/β-d-xylosidase | |
GH95 | Xyloglucan | Xyloglucan α-1,2-fucosidase | |
Expansin | |||
CE8 | HG | Pectin methylesterase | |
CE13 | RGI | Pectin acetylesterases | |
PL1 | HG | Pectin Lyases | |
PL4 | RGI | RGI lyses | |
PMT | HG | HG methyltransferase |
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Yokoyama, R. A Genomic Perspective on the Evolutionary Diversity of the Plant Cell Wall. Plants 2020, 9, 1195. https://doi.org/10.3390/plants9091195
Yokoyama R. A Genomic Perspective on the Evolutionary Diversity of the Plant Cell Wall. Plants. 2020; 9(9):1195. https://doi.org/10.3390/plants9091195
Chicago/Turabian StyleYokoyama, Ryusuke. 2020. "A Genomic Perspective on the Evolutionary Diversity of the Plant Cell Wall" Plants 9, no. 9: 1195. https://doi.org/10.3390/plants9091195