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Article

Artificially Reared Salmo trutta Fry in a Natural Environment: Growth and Fitness Compared to Wild Specimens

by
Vytautas Rakauskas
1,*,
Simonas Račkauskas
1,
Danguolė Montvydienė
2,
Živilė Jurgelėnė
2,
Eglė Šidagytė-Copilas
3,
Vesta Skrodenytė-Arbačiauskienė
1,
Saulius Stakėnas
1,† and
Tomas Virbickas
1
1
Laboratory of Fish Ecology, State Scientific Research Institute Nature Research Centre, Akademijos Street 2, 08412 Vilnius, Lithuania
2
Laboratory of Ecotoxicology, State Scientific Research Institute Nature Research Centre, Akademijos Street 2, 08412 Vilnius, Lithuania
3
Laboratory of Evolutionary Ecology of Hydrobionts, State Scientific Research Institute Nature Research Centre, Akademijos Street 2, 08412 Vilnius, Lithuania
*
Author to whom correspondence should be addressed.
Deceased author.
Biology 2026, 15(8), 630; https://doi.org/10.3390/biology15080630
Submission received: 24 February 2026 / Revised: 4 April 2026 / Accepted: 14 April 2026 / Published: 16 April 2026

Simple Summary

The global decline of fish stocks is a matter of significant concern, leading to the widespread practice of stocking artificially reared fish across many countries. However, such individuals often face challenges in adapting to natural environments and may fail to compete effectively with their wild counterparts, potentially resulting in reduced growth rates and diminished overall fitness. This study demonstrates that artificially reared and stocked juveniles exhibited slower growth and sustained more frequent fin damage compared to wild individuals. Such growth retardation may indicate difficulties in the adaptation and recruitment of stocked fish. Consequently, while the introduction of artificially reared sea trout fry facilitates the restoration of extinct populations, its potential to enhance sea trout stocks within Baltic Sea riverine ecosystems may be limited.

Abstract

The decline of salmonid stocks in the Baltic Sea region is a matter of serious concern, prompting many countries to implement widespread stocking of artificially reared individuals to restore or enhance populations. While such interventions are intended to be beneficial, their efficacy remains a subject of ongoing debate. Artificially reared fish often face challenges in adapting to natural environments and may struggle to compete with wild counterparts, potentially leading to reduced growth rates and diminished overall fitness. This study evaluated the growth and physiological condition of naturally hatched versus artificially reared Salmo trutta juveniles during their first two years of life, prior to smoltification and seaward migration. The results demonstrated that stocked juveniles exhibited significantly slower growth, a higher incidence of fin damage, and a greater abundance of cultivable gut bacteria compared to wild individuals. Conversely, no significant differences were observed in blood parameters. Such growth retardation suggests potential difficulties in adaptation and recruitment. Consequently, while the release of artificially reared S. trutta fry facilitates the restoration of extinct populations, its capacity to enhance existing stocks within Baltic Sea riverine ecosystems may be limited.

1. Introduction

Global fish populations are facing an unprecedented decline driven by a combination of overfishing, illegal fishing practices, pollution, climate change, and habitat degradation [1]. These factors are similarly impacting sea trout, Salmo trutta (Linnaeus, 1758) stocks within the Baltic Sea catchment [2]. Although S. trutta was assessed as “Least Concern” for the IUCN Red List of Threatened Species in 2022, the report highlights localised subpopulation declines and projects significant future population reductions due to climate change [3]. Despite its current conservation status, S. trutta remains a species of significant ecological and economic importance in the Baltic region. This importance has necessitated widespread stocking programmes using hatchery-reared fish to support and restore wild populations [2,4,5]. In the Nemunas River basin, the fourth largest tributary of the Baltic Sea, a notable decline in S. trutta populations has also been documented [6]. Consequently, significant efforts have been undertaken in Lithuania since the late 20th century to supplement wild S. trutta stocks through artificial propagation and stocking [7].
While artificial stocking of S. trutta offers potential benefits, the practice may entail adverse effects that necessitate careful evaluation. For instance, hatchery-reared fry often experiences significant challenges in adapting to natural environments post-release [8,9,10,11,12,13]. These individuals may be outcompeted by wild conspecifics for essential resources, such as food [14] and optimal habitats [15]. Such competitive disadvantages can lead to suboptimal growth rates and diminished physiological condition compared to wild populations, potentially jeopardising their initial seaward migration. Recent research underscores that interactions between hatchery-reared and wild salmonids are complex and highly context-dependent. A global synthesis [16] demonstrated that hatchery-origin fish frequently exhibit reduced fitness and may negatively impact wild populations through both genetic and ecological mechanisms. Furthermore, recent reviews highlight that the efficacy of stocking varies considerably based on environmental conditions, genetic lineage, and release strategies [17,18]. Accumulating evidence also suggests that early-life rearing environments profoundly influence behavioural and physiological ontogeny, which ultimately dictates post-release performance. To date, there remains a critical knowledge gap regarding the comparative growth rates and overall fitness of hatchery-reared versus wild S. trutta fry within natural stream habitats during the high-mortality period preceding their first migration. Addressing this gap is of significant fundamental and applied importance for fisheries management.
In Lithuania, S. trutta produced in state-owned hatcheries are primarily released at the fry stage. The underlying premise is that early natural selection in riverine environments ensures that only the individuals best adapted to wild conditions will successfully reach the smolt stage and migrate to the Baltic Sea. However, the survival rate of artificially reared fry to smolt is remarkably low, with data from the International Council for the Exploration of the Sea (ICES) indicating an average survival rate of approximately 3%. It is generally assumed that those individuals who do reach the smolt stage will exhibit post-smolt survival rates and homing abilities comparable to their wild counterparts. Augmenting adult S. trutta stocks with fitter individuals theoretically increases the probability of successful natural reproduction and benefits recreational fisheries [19]. Despite this potential, empirical data regarding the physiological condition of hatchery-reared S. trutta parr following their growth in natural environments in Lithuania remain scarce [20,21,22].
This study aimed to assess and compare the growth and physiological condition of wild and hatchery-reared S. trutta juveniles throughout their first two years of life, preceding smoltification and seaward migration. The investigation was conducted in two adjacent tributaries of the Siesartis River, which represents one of the most critical salmonid habitats in Lithuania.

2. Materials and Methods

2.1. Study Sites

The study was conducted in the Šešuola and Plaštaka streams, both of which are tributaries of the Siesartis River within the Nemunas River basin (Figure 1). These watercourses are situated in a hydrological region characterised by predominantly groundwater-fed systems, which account for approximately 40% of the total annual runoff [18]. Geographically and hydrologically, the two streams are highly comparable (Table 1), discharging into the Siesartis River within 0.4 km of each other (Figure 1). In their lower reaches, the streambed substrate is dominated by gravel and pebbles, providing suitable spawning and nursery grounds. The hydromorphology of the Šešuola Stream remains largely natural, although it is channelized between 14 and 10 km from the mouth and obstructed by a dam at the 3 km mark. In contrast, the Plaštaka Stream retains a completely natural hydromorphological state. No known point or diffuse sources of pollution affect the water quality in either catchment. According to national monitoring data, both streams consistently meet the criteria for “good ecological status”, thereby providing optimal habitats for the local wild S. trutta population.

2.2. Water Temperature

Water temperatures in the investigated streams were monitored using TG-4100 temperature loggers, which were positioned in close proximity to the S. trutta stocking sites in 2019, 2020, and 2022. The loggers remained submerged from May (coinciding with the stocking period) through November (the final sampling phase) each year. Measurements were recorded at 30 min intervals daily throughout the three-year study period to capture fine-scale thermal fluctuations.

2.3. Fish Stocking

The S. trutta fry used for river stocking were obtained from the state salmonid hatchery. In each study year, all artificially reared individuals were derived from a single breeding pair (one male and one female), with a different wild spawner pair collected annually from the Siesartis River to minimise within-year genetic variation. The S. trutta fry used for stocking were reared under controlled hatchery conditions in flow-through systems supplied with aerated freshwater. Water temperature was maintained within the range of approximately 12–15 °C during early developmental stages and increased to 16–20 °C during juvenile rearing. Dissolved oxygen concentration was maintained above 6 mg/L, and pH ranged between 6.5 and 7.5. Fish were reared at densities typical for salmonid hatcheries, initially up to approximately 3000 individuals m−2 during early juvenile stages and gradually reduced to 1000–1200 individuals m−2 as fish grew. Survival rates during rearing typically exceeded 70–80%. Feeding during early ontogeny consisted of live feed (e.g., Artemia nauplii), followed by a gradual transition to commercial starter diets, with feeding performed multiple times per day to ensure optimal growth.
To ensure the separation of artificially reared and wild, naturally hatched specimens throughout the experiment, all stocked S. trutta individuals were treated with Alizarin Red S (Sigma-Aldrich, St. Louis, USA). ARS dyeing is one of the most widely used methods in practice [24,25,26]. Each study year, up to 4000 S. trutta fry were marked with ARS using the technique described by Caudron and Champigneulle [27]. The fry was immersed in a 100 mg/L ARS solution for three hours. During immersion, the fish were kept in a 0.6 m3 tank filled with 400 L of aerated deep-well water. After dyeing, all fish were transferred to 1 m3 flow-through tanks (minimum flow rate: 1 L per g of wet body mass per day), which were half-filled with aerated deep-well water, for a two-day acclimation period before stocking. All animal procedures were carried out in accordance with Directive 2010/63/EU and the Guidelines for the Care and Use of Laboratory Animals. No mortality of S. trutta fry exposed to ARS dye was observed during the marking procedure.
Stocking of the Šešuola and Plaštaka streams occurred in May 2019–2022. Prior to each stocking, a subsample of 25 released S. trutta fry was measured and weighed. The detailed numbers, sizes, weights, and release dates of the stocked S. trutta fry in each river are presented in Table 2. The fry was released during the second half of May, which minimised the duration of fish captivity and the harmful domestication-related effects [28,29]. All fish stocking activities were performed in the same sections of the streams and followed the same salmonid stocking guidelines used by the State Fisheries Service. In both streams, the fry was evenly distributed along a 100 m stretch located upstream from the stream mouth (see Figure 1 for the detailed stocking locations).

2.4. Fish Assemblages

An assessment of fish assemblages in rivers was performed in September 2022. The sampling was performed using battery-powered electric fishing gear (Samus Special Electronics, Samus-725 mp). Fishing was performed up to a 450 m stretch of each river downstream from the point of fry stocking. All captured fish individuals were identified to a species level, measured and weighed. Fish were identified using the identification key provided by Kottelat and Freyhof [30], and taxonomy followed FishBase [31]. All fish were released back to the rivers as soon as possible after their initial analysis. Sampling was carried out under the permits obtained from the Environment Protection Agency, Lithuania.
Fish abundance (A, ind.) and biomass (B, kg) were calculated and extrapolated for 100 m2 (ind./100 m2 and kg/100 m2): The diversity of fish assemblages was calculated using the Shannon–Weiner diversity index:
H′ = −∑Pilog2Pi
where H′—index of species diversity; S—number of species in a community; Pi—number of individuals in each (i) species.

2.5. Fish Growth

Salmo trutta specimens for growth analyses were annually sampled in both studied streams from May to November in 2019–2022. In total, 1348 specimens of S. trutta juveniles were sampled. Fish sampling was performed using battery-powered electric fishing gear. In each stream, fishing was performed from the stream mouth to the point where artificially reared specimens were released (Figure 1). Wherever possible, up to 50 specimens of the age 0+ and 1+ were collected during each sampling event. Up to five sampling events were performed each year to cover different seasons. The number of collected specimens in the studied streams is provided in Table 3. The overall collected number of individuals for the experiment (1348) accounted for less than 1% of the total number of stocked specimens (15,000) during this study.
All captured S. trutta specimens were measured to the nearest 1 mm, weighed to the nearest 0.1 g, and transported to the laboratory for further ARS mark detection. Scales of each captured specimen were collected for determining fish age [32], while a pair of otoliths (saggittae) was removed for determining ARS marks.
We modelled the growth of fish as total length and weight functions of time using linear mixed models (LMMs). Both response variables were log-transformed to improve data homoscedasticity, normality, and linearity. The time variable for each cohort (Days) was expressed as the number of days since January 1st of the hatching year. This variable was also used log-transformed to improve linearity, and it was then centred around November 1st of the hatching year (day 305, log-transformed) for more meaningful effect testing (Figure 2 depicts original values). The fixed model component included the fully crossed effects of Time, Origin (reared vs. wild), and Stream (Šešuola vs. Plaštaka). The models also included random intercepts for Year (2019 to 2022) and Cohort (1st to 4th) to account for possible annual climatic and rearing conditions variability. We further proceeded with paired comparisons among each four means estimated (using Satterthwaite degrees of freedom) within three well-covered stages: June 1st and November 1st for age 0+ and November 1st for age 1+, as well as for growth slopes for each group. This procedure was conducted with Tukey p-value correction for comparing families of four estimates and Šidak correction for confidence levels reflected in visualisation. The analyses were conducted in R v. 4.5.1 environment, employing packages lme4 v.2.0-1 and lmerTest v.3.2-1 (LMM fitting and testing of random effects), performance v.0.16.0 (model assumption inspection), car v.3.1-5 (fixed effect testing), emmeans v.2.0.2 and multcomp v.1.4-30 (pairwise comparisons), and visreg v.2.8.0 (model visualisation).
Figure 2. Time-scaled growth (total length and weight) of reared vs. wild S. trutta juveniles in studied streams (Šešuola vs. Plaštaka) (see Table 4 for effect tests). (A,D) depict whole modelled growth curves in the original data scale. Vertical dotted lines in (A,D) indicate the stages at which the three families of pairwise comparisons were conducted. (B,E) depict the families of pairwise comparisons within each stage, separated by dotted lines. (C,F) depict pairwise comparisons of growth slopes. Small letters indicate homogenous groups of estimated means. Note the log-transformed responses in (B,D) as they were used in statistical analysis.
Figure 2. Time-scaled growth (total length and weight) of reared vs. wild S. trutta juveniles in studied streams (Šešuola vs. Plaštaka) (see Table 4 for effect tests). (A,D) depict whole modelled growth curves in the original data scale. Vertical dotted lines in (A,D) indicate the stages at which the three families of pairwise comparisons were conducted. (B,E) depict the families of pairwise comparisons within each stage, separated by dotted lines. (C,F) depict pairwise comparisons of growth slopes. Small letters indicate homogenous groups of estimated means. Note the log-transformed responses in (B,D) as they were used in statistical analysis.
Biology 15 00630 g002
Table 4. Results of LMMs testing the effects of Time, Origin (reared vs. wild) and Stream (Šešuola vs. Plaštaka) on S. trutta juveniles’ total length and weight. Significant effects (p < 0.05) are in bold.
Table 4. Results of LMMs testing the effects of Time, Origin (reared vs. wild) and Stream (Šešuola vs. Plaštaka) on S. trutta juveniles’ total length and weight. Significant effects (p < 0.05) are in bold.
TermTotal LengthWeight
Χ2pΧ2p
Time1823.3<0.00011071.7<0.0001
Origin22.7<0.000122.9<0.0001
Stream13.90.000224.4<0.0001
Time: Origin12.40.00041.50.2243
Time: Stream18.8<0.000137.6<0.0001
Origin: Stream0.10.70381.60.2113
Time: Origin: Stream0.10.735117.1<0.0001

2.6. ARS Marks Detection

ARS marks detection was performed to separate wild vs. reared S. trutta specimens. A pair of otoliths was removed from each of the fish juveniles sampled, then cleaned, desiccated, placed on thin glass slides and kept in the dark until microscopic examination. The presence of ARS marks in fish otoliths was detected under a fluorescence microscope with a magnification power of 4 x. This microscope was equipped with green (λex = 560–595 nm and λem = 645 nm) filters. ARS marks were clearly seen under the fluorescence light (Figure 3).

2.7. Fins Damage

During the first year of sampling fish, we noticed that fin damage was more frequently expressed within artificially reared S. trutta individuals compared to the wild ones. To assess the extent of differences, the fins of the subsample of 699 individuals of S. trutta were investigated in 2020–2022. Fin damages were evaluated by visual examination of pectoral, dorsal and caudal fins. Fish were separated into two groups depending on their fin damage: (a) individuals with damaged fins (significantly reduced or absent), and (b) individuals with healthy fins (intact) (Figure 4).
The probability of having a non-intact (reduced or absent) fin was modelled using a general linear mixed model (GLMM) with a binomial (Bernoulli) error distribution, which was built in a manual forward stepwise procedure. The null model included the random intercepts for the specimen ID (1139 levels), River (5 levels), and the Year (2020, 2021, 2022) factors. The scope of fixed terms included a continuous covariate of Condition (CF; centred around the mean), and the factors of Fin location (caudal, dorsal, pectoral), Age (0+, 1+), Origin (reared vs. wild), as well as possible interactions of the four potential predictors. The criteria on subsequent term being included were adherence to the term hierarchy principle, Akaike Information Criterion (AIC) reduction, and a significant model improvement as per the partial Χ2 test. We further proceeded with paired comparisons with Tukey p-value correction for comparing families of 12 estimates. The analyses were conducted in R v. 4.5.1 environment, employing packages glmmTMB v.1.1.14 (GLMM fitting), performance v.0.16.0 (model assumption inspection), car v.3.1-5 (fixed effect testing), emmeans v.2.0.2 and multcomp v.1.4-30 (pairwise comparisons).

2.8. Haematological Assessment

A significant part of the overall collected fish was used for blood parameters assessment. In total, 456 individuals of artificially reared and wild S. trutta juveniles were used. Fish were captured from the natural environment, and blood samples were collected immediately after capture. No additional handling or experimental manipulation was performed prior to blood sampling. These fish were sampled in October 2019, 2020, and 2022 (Table 5). All selected fish were measured and weighed to calculate Fulton’s condition factor (CF). Blood samples were collected to analyse four parameters: number of red blood cells (RBC), the mean cell volume (MCV), the amount of glucose (GLU), and haematocrit value (HCT). The reared fishes were distinguished by the presence of ARS marks in fish otoliths (Figure 3).
A total of 0.2 millilitres of blood was extracted from the caudal vein of the fish using a sterile syringe. The anticoagulant sodium citrate was utilised at a concentration of 3.8%. The blood samples were transferred to blood collection tubes. The determination of glucose concentrations in fish blood was accomplished through the utilisation of the automatic Glucose Analyzer (EKSAN-Gm, Analita, Vilnius, Lithuania). The blood glucose method has a minimum detection limit ranging from 2 to 30 mmol L−1, with an error margin for repeated measurements of ≤5%. The measurement of haematocrit was performed using heparinized capillary tubes. The tubes were centrifuged for 5 min at 1500 rpm in a microhematocrit centrifuge (CENTRIFUGE HAEMATOKRIT 210, Hettich, Tuttlingen, Germany). The haematocrit reader was utilised to ascertain the percentage of packed red blood cells. RBC and WBC were counted in a Neubauer chamber using a light microscope, Nikon Eclipse E80i (Nikon Corporation, Tokyo, Japan), in accordance with the method delineated by Ivanova [33]. The neutral red and crystal violet solutions were used as diluting fluids. MCV was calculated according to the method outlined by Haney et al. [34].
We analysed the log-transformed blood parameters (RBC, MCV, GLU, and HCT) as potential functions of Condition (CF), Origin (reared vs. wild), Stream (Šešuola vs. Plaštaka), and Age (1+ vs. 0+), and all possible interactions, using a manual forward stepwise procedure in extending LMMs. The null models only included a random intercept for the Year factor (2019, 2020, 2022). The Condition covariate was centred around the global mean value (Figure 5 depicts original values). At each step, the most informative candidate term to include would be picked as the one that, when included, would reduce the model AIC value the most. However, the term would only be included in the model if it significantly improved it (as judged by comparing the models with/without the term using the function Anova). During this process, we adhered to the interaction hierarchy principle by not including higher-order interactions without first including all their subcomponents. The analyses were conducted in an R v. 4.5.1 environment, employing packages lme4 v.2.0-1 and lmerTest v.3.2-1 (LMM fitting and testing of random effects), performance v.0.161.0 (model assumption inspection), and car v.3.1-5 (fixed effect testing).
Figure 5. Condition (Fulton’s condition factor), Origin (reared vs. wild), Stream (Šešuola vs. Plaštaka), and Age (1+ vs. 0+) effects on S. trutta juveniles’ blood parameters: (A): number of red blood cells (RBC), (B): the mean cell volume (MCV), (C): the amount of glucose (GLU), and (D): haematocrit value (HCT). (See Table 6 for effect tests).
Figure 5. Condition (Fulton’s condition factor), Origin (reared vs. wild), Stream (Šešuola vs. Plaštaka), and Age (1+ vs. 0+) effects on S. trutta juveniles’ blood parameters: (A): number of red blood cells (RBC), (B): the mean cell volume (MCV), (C): the amount of glucose (GLU), and (D): haematocrit value (HCT). (See Table 6 for effect tests).
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Table 6. Results of forward-stepwise LMMs testing the effects of Condition (Fulton’s condition factor), Origin (reared vs. wild), Stream (Šešuola vs. Plaštaka), and Age (1+ vs. 0+) on S. trutta juveniles’ blood parameters: number of red blood cells (RBC), the mean cell volume (MCV), the amount of glucose (GLU), and haematocrit value (HCT). Significant effects (p < 0.05) are in bold.
Table 6. Results of forward-stepwise LMMs testing the effects of Condition (Fulton’s condition factor), Origin (reared vs. wild), Stream (Šešuola vs. Plaštaka), and Age (1+ vs. 0+) on S. trutta juveniles’ blood parameters: number of red blood cells (RBC), the mean cell volume (MCV), the amount of glucose (GLU), and haematocrit value (HCT). Significant effects (p < 0.05) are in bold.
TermRBCMCVGLUHCT
Χ2pΧ2pΧ2pΧ2p
Condition 14.80.0001
Origin 5.80.0161
Stream 11.20.0008 89.8<0.0001
Age54.5<0.0001 21.7<0.0001

2.9. Cultivable Gut Bacteria

A representative part of the overall collected fish was used for a gut bacteria cultivation study. A total of 40 S. trutta juveniles of age 0+ (20 wild and 20 reared) at the end of October 2019 from the Plaštaka and Šešuola streams were used for analysis of cultivable gut bacteria. Selected specimens were placed in sterile plastic bags and transported on ice to the laboratory. Fish were aseptically dissected, and the contents of the midgut and distal intestine were collected. The gut contents of 3–4 fish from one tested group were pooled to minimise individual variation in gut bacteria, and then serially diluted (1:10) in Phosphate Buffered Saline (PBS, pH 7.3, Oxoid, Hampshire, UK). 100 µL of each dilution (10−4 to 10−8) was spread onto Tryptone Soya Agar (TSA, Oxoid, Hampshire, UK) plates in triplicate. The plates were incubated at 15 °C for 96 h, after which the colony-forming units (CFU/g) were calculated and expressed as Log10 CFU/g (mean ± SD).
The assessment of cultivable gut bacteria data was conducted using a one-way ANOVA, followed by a Bonferroni post hoc test using Statistica 7.0 software (USA). Differences were accepted as significant at the 95% level of confidence (p < 0.05).

3. Results

3.1. Streams Water Temperature

The measured annual water temperature averages showed a clear annual pattern in the differences in water temperatures of the studied streams. Results revealed a notably higher (from 1.46 to 1.84 °C) measured average of the annual temperature values in Šešuola Stream compared to the Plaštaka (Table 7). The difference can be explained by the artificial dam in the upper part of the Šešuola stream, which gives a flow of slightly warmed surface water from the dam pond.
According to Elliott [35], two distinct thermal ranges are critical for the growth dynamics of S. trutta. The optimal physiological range, within which the species actively feeds and experiences minimal thermal stress, spans from 4 to 19 °C. However, the range at which energy conversion efficiency is maximised, resulting in peak growth rates, is narrower, extending from 8 to 17 °C. Our thermal data revealed a considerably higher number of days within both intervals in the Plaštaka Stream compared to the Šešuola Stream. Throughout the monitoring period, 440 days in the Plaštaka Stream fell within the optimal physiological range (4–19 °C), whereas only 328 days were recorded in the Šešuola Stream. More strikingly, the Plaštaka Stream provided 172 days within the range required for maximum growth (8–17 °C), compared to only 60 days in the Šešuola Stream.

3.2. Fish Assemblages

Fish abundance and biomass in Šešuola Stream (183.1 ind./100 m2 and 3.10 kg/100 m2) were 3 times higher than in Plaštaka Stream (62.2 ind./100 m2 and 1.3 kg/100 m2), respectively. In the Šešuola stream, 16 different fish species were caught during the fish assemblage’s assessment, compared to 20 species in the Plaštaka Stream (Table 8). In the Šešuola Stream, fish from the family Leuciscidae dominated the fish assemblage, constituting 39.4% of it. Conversely, in the Plaštaka stream salmonids (Salmonidae) were the dominant group among the whole fish assemblage, reaching 28.0% and the subdominant group Leuciscidae (23.0%). Analysis of biomass distribution revealed that Perca fluviatilis was dominant (51.2%) in the Šešuola Stream, followed by the subdominant species S. trutta (22.6%). In contrast, the majority of biomass in the Plaštaka stream comprised S. trutta (53.8%). Further analysis using the Shannon–Weiner diversity index, despite the smaller number of detected species (16 in Šešuola, 20 in Plaštaka), showed that the Šešuola stream (H′ = 2.09) had a higher index value compared with the Plaštaka stream (H′ = 1.74).

3.3. S. trutta Growth

Initially, the reared S. trutta fry were significantly larger than the naturally hatched fry present in the studied streams at that time. The artificially reared and stocked fry were up to 36% longer and up to 75% heavier (Table 9).
Further S. trutta growth analysis also revealed that Origin (reared vs. wild) remains a significant factor when considering fish length and weight (Table 4). This trend is clearly seen, especially during their first year. Artificially reared individuals were significantly bigger after their first year (Figure 2). However, differences vanished while reaching their second year, just before smoltification (Figure 5). This indicates a slower growth of reared fry compared to the natural ones. Results also revealed that the Stream factor was significant when considering fish weight and length (Table 4). Fishes were slightly bigger in the Plaštaka Stream compared to the Šešuola Stream, especially during their first year (Figure 4).

3.4. Fins Damages

An assessment of fin damage revealed significantly higher prevalence among artificially reared S. trutta juveniles (Table 10). Overall, fin damage was observed in 75% of artificially reared 0+ S. trutta juveniles, while only 24% of wild specimens had damaged fins. The same trend was observed in older (1+) individuals (Table 10).
Statistical analyses showed that fish Origin (reared vs. wild) was significant for the observed frequency of fin damage (Table 11). Interestingly, the fins’ position (caudal, dorsal or pectoral) was also crucial for the frequency of damage (Table 11). Among reared juveniles, the most often damaged were observed within pectoral fins, while dorsal fin damage was the most frequent among wild individuals. Caudal fin damage was the rarest among both reared and wild juveniles (Table 11, Figure 6). Surprisingly, the age factor was also significant for the fin’s damage (Table 11). First-year wild juveniles had fewer damage counts compared to the second-year juveniles (Table 10, Figure 6). However, such a trend was not observed for the reared juveniles. More than 70% of reared individuals had fin damage among both 0+ and 1+ juveniles (Table 10). The forward-stepwise GLMM indicated that up to 2nd order interaction between tested factors had a significant effect on the probability of fin damage, while the Condition factor was not selected for the model.

3.5. Haematological Analyses

Haematological analyses revealed that Origin (reared vs. wild) was an important factor only for the glucose concentration in fish blood. Results also showed that fish age significantly increased the number of RBC and the value of HCT in the studied fish blood. At the same time, the Stream effect was significant for the HCT values and the MCV (Table 6). These parameters were higher in Plaštaka Stream (Figure 6). Blood analyses also showed that higher values of fish overall fitness (Condition factor) are related to higher glucose concentrations in fish blood (Table 6, Figure 5).

3.6. Cultivable Gut Bacteria

Analysis of S. trutta juvenile gut bacteria showed that the number of cultivable bacteria in reared fish from the Šešuola and Plaštaka streams five months after stocking was significantly higher than in wild fish (one-way ANOVA: Šešuola F2.10 = 49.00; p < 0.005 and Plaštaka F2.13 = 86.018; p < 0.005, respectively) (Table 12).

4. Discussion

4.1. Basic Environment Conditions

Generally, the growth of S. trutta is profoundly influenced by a complex interplay of abiotic and biotic factors, including water temperature [36,37], dissolved oxygen levels [38,39], prey availability [40,41], competition for food and shelter [42,43,44,45], and genetic lineage [46,47,48]. The two streams investigated in this study exhibited similarities in catchment area, mean annual flow, and hydrological regime. Furthermore, the genetic background of the S. trutta juveniles was likely comparable, as the streams are geographically proximate and belong to the same population within the Siesartis River basin; notably, the parental stock for the artificially reared fry was also sourced from the Siesartis River. Despite these commonalities, the streams differed significantly in their thermal profiles and biological productivity. The Šešuola Stream was characterised by higher mean temperatures and a three-fold increase in overall fish abundance and biomass compared to the Plaštaka Stream, suggesting a higher trophic status. Conversely, the Plaštaka Stream maintained a significantly higher number of days within the optimal temperature range for S. trutta growth throughout the study period. Additionally, interspecific competition was likely less intense in the Plaštaka Stream. These environmental and community disparities may account for the observed differences in S. trutta juvenile growth between the two sites.

4.2. Fins Damage

A significant increase in fin damage was observed among hatchery-reared S. trutta specimens compared to their wild counterparts. Such a high prevalence of fin erosion is a well-documented phenomenon in artificially reared salmonids [49,50,51,52,53], with some researchers even suggesting that fin degradation may serve as a reliable indicator of hatchery origin [54]. However, our findings demonstrate that fin damage also occurs in wild populations, albeit to a lesser extent. Generally, fin injuries arise from a variety of stressors, including abrasive surfaces, agonistic interactions, nutritional imbalances, high stocking densities, poor water quality, and bacterial infections [55,56,57]. Specifically, dorsal fins are most frequently injured during aggressive encounters, whereas pectoral fin damage predominantly results from contact with tank walls. In contrast, anal and pelvic fins are less prone to agonistic damage but remain susceptible to abrasion from benthic substrates [56,57]. The primary concerns regarding fin degradation involve the subsequent survival and performance of fish in natural environments [51]. Severe fin damage impairs swimming ability, potentially reducing a fish’s capacity to adapt and survive in the wild, and is often correlated with diminished growth and higher mortality rates [58,59].
Our findings indicate that pectoral fin damage was the most prevalent injury among hatchery-reared juveniles, whereas dorsal fin damage was most frequent in wild individuals, albeit with a significantly lower overall prevalence compared to the hatchery group. Caudal fin injuries were the least common in both cohorts. This pattern of fin degradation aligns with the established understanding that pectoral fin trauma primarily results from abrasion against tank walls in artificial environments, while dorsal fin damage typically occurs during agonistic interactions in the wild [56,57].
In summary, fin damage in S. trutta juveniles likely impairs foraging efficiency, increases metabolic costs associated with tissue repair, and facilitates secondary infections, all of which contribute to reduced growth rates [60,61,62]. Consequently, substantial fin erosion or loss may be a critical factor limiting the migratory capacity and, ultimately, the long-term reproductive success of hatchery-reared S. trutta juveniles.

4.3. Fish Growth

It is well-established that hatchery-reared fish may initially retain a size advantage upon introduction into natural environments, despite potential physiological maladaptation, impaired swimming performance, or behavioural deficits often associated with a high prevalence of fin damage. Indeed, some studies suggest that the combination of greater body length and mass, alongside characteristic fin erosion, serves as a reliable metric for distinguishing aquaculture-reared salmonids from their wild counterparts [54,63]. However, this initial advantage in size and weight is frequently transient; evidence suggests that reared individuals often lose their competitive edge over time when subjected to the rigours of natural environments [64].
Our results demonstrate that hatchery-reared S. trutta juveniles were considerably larger than naturally hatched individuals during their first year. This initial disparity stems from the fact that the reared fry was significantly larger (up to 36% longer) than their wild counterparts at the time of stocking, a result of the stable, optimal thermal conditions and consistent food availability provided during artificial rearing. This pattern aligns with documented trends in aquaculture, where reared fish typically exhibit accelerated growth and reach greater sizes than wild fish of the same age [63]. However, our findings indicate that these individuals lost this initial size and weight advantage over time following their release. By the end of the second year, immediately prior to smoltification and seaward migration, the previously observed size differences had dissipated in both streams (Figure 4), regardless of variations in thermal regimes or productivity. This suggests that hatchery-reared S. trutta juveniles exhibit slower growth rates than naturally hatched individuals under wild conditions. Several factors may contribute to this growth retardation. Post-stocking, artificially reared fry may face significant challenges in adapting to natural environments [8,9,10,11,12,13], potentially losing the competition for critical resources, such as food and habitat, to naturally spawned residents [14,15]. Furthermore, the high prevalence of fin damage observed in this study likely exerted a negative influence on the growth performance of the reared fish.
Overall, within a two-year period, the wild S. trutta juveniles—despite their significantly smaller initial size—attained dimensions comparable to those of their hatchery-reared counterparts. By the onset of their primary seaward migration to the Baltic Sea, no significant disparities in size or physiological fitness were observed between the two groups. These findings indicate that the post-release growth rate of hatchery-reared juveniles is markedly lower than that of wild individuals under natural conditions. Should this suboptimal growth trajectory persist into later life stages, it may suggest that artificially reared specimens possess a reduced probability of reaching maturity and achieving successful recruitment.
When interpreting these results, it is crucial to consider the genetic architecture of the stocked cohorts. Notably, within each study year, the artificially reared individuals originated from a single breeding pair, a factor that may have constrained genetic variability and, consequently, adaptive potential. However, as the study spanned four consecutive years and utilised different parental pairs for each annual release, the observed phenotypic patterns remained consistent across multiple independent cohorts. This longitudinal consistency suggests that the disparities between reared and wild juveniles likely reflect the synergistic effects of artificial rearing environments and cohort-specific genetic constraints, rather than being an artefact of a single parental effect.
These findings are consistent with recent literature indicating that hatchery-reared salmonids frequently exhibit altered growth trajectories and diminished ecological performance upon introduction to natural environments. Previous syntheses have demonstrated that such disparities typically arise from a synergy of genetic and environmental factors inherent to hatchery rearing [16]. Furthermore, the efficacy of stocking programmes has proven to be highly variable, contingent upon both the specific ecological context and the overarching management strategies employed [18]. Experimental evidence further suggests that environmental conditions during early life stages can exert long-lasting effects on the growth, behaviour, and adaptive capacity of salmonids [65]. This supports the interpretation that the differences observed in the present study reflect complex developmental and ecological processes, rather than being attributable to a single causal factor.

4.4. Physiological Condition

Generally, haematological parameters—including red blood cell count (RBC), mean corpuscular volume (MCV), glucose (GLU) concentration, and haematocrit (HCT) levels—serve as robust indicators of overall fish health and physiological fitness [66,67]. Even subtle haematological fluctuations can function as early warning signals of subclinical stress, particularly in environments characterised by complex stressors [68]. The results of this study demonstrate that the selected blood parameters were primarily influenced by the age of the S. trutta juveniles and the specific characteristics of their stream habitat. Notably, fish origin (wild versus hatchery-reared) had a significant impact only on GLU concentration, suggesting that while growth and morphology differ between the cohorts, their broader physiological profiles are largely shaped by shared environmental conditions.
Glucose is one of the most rapidly responding and frequently measured indicators of physiological stress in fish. However, there is a lack of data comparing GLU levels in reared and wild fish. Typically, glucose levels are investigated in farmed fish. Han et al. [69] demonstrated that O. niloticus fed high-starch diets exhibited concurrent increases in fitness and GLU. Similarly, Callet et al. [70] showed that rainbow trout fed low-protein, high-carbohydrate diets developed altered GLU metabolism, including increased glycogen storage and hyperglycaemia. Furthermore, GLU levels vary by species, environment, toxicant type, and exposure duration, complicating interpretation [71]. Acute stressors such as handling, hypoxia, or pollutants have been shown to rapidly induce hyperglycaemia by activating secondary stress pathways [72,73]. Ma et al. [74] and Biswal et al. [72] demonstrated that the presence of stress-induced increases in GLU activates glycolytic and other stress-related metabolic pathways. Glucose is widely used as an indicator of physiological stress and energy status; however, Witeska et al. [75] noted that it should be interpreted within a broader haematological context to avoid false positives. Similarly, Krishnan and Rohner [76] emphasise that teleost models of hyperglycaemia demonstrate high plasticity in GLU regulation, particularly under nutritional or environmental stress. In our study, elevated GLU levels were observed in reared juveniles compared to wild individuals, without corresponding changes in RBC or haematocrit. This pattern suggests differences in metabolic status between reared and wild juveniles, potentially related to rearing history. However, given the non-specific nature of glucose as a biomarker, these differences cannot be attributed to a single underlying cause.
It is well-established that fish erythrocyte indices serve as sensitive indicators of changes in water quality and environmental factors. Studies have shown that MCV, RBC parameters, and HCT vary under different environmental conditions [77,78]. MCV reflects erythrocyte size and is commonly associated with oxygen transport capacity and metabolic activity in fish [75,78]. Lower MCV values were observed in fish from the Plaštaka Stream than in fish from the Šešuola Stream. This inter-river difference may be related to environmental variability, including differences in temperature regimes, oxygen availability, and metabolic demands. Variations in MCV have been linked to environmental conditions and physiological adjustments in fish, although the underlying mechanisms are often complex and species-specific [66,76,78,79]. Therefore, while the observed differences in MCV are plausibly linked to environmental variation between streams, their physiological significance remains complex and likely reflects multiple interacting environmental and biological factors.
The HCT values observed in this study are consistent with those previously reported in the literature for salmonid species. For example, Nabi et al. [80] reported HCT values ranging from 29% to 40% in Oncorhynchus mykiss reared under standardised Himalayan aquaculture conditions. Sheikha et al. [81] found average HCT levels of 35% in S. trutta, with no significant difference between the sexes. The age-related increase in HCT observed in our study aligns with well-documented physiological changes that occur during salmonid growth [78]. As fish grow, HCT increases due to rising metabolic demands and increased erythrocyte production [82,83]. This trend is reflected in haematological reference values for O. mykiss; juvenile fish typically have a lower HCT (31%) than adult fish (37%) [80]. Additionally, differences in HCT values may be determined by habitat-specific metabolic demands [83,84]. The significant stream effect observed in our study may be explained by differences in environmental oxygen availability, water temperature, or cumulative exposure to stressors. These factors influence erythropoietic output and blood viscosity regulation.
Our haematological analysis provides novel insights by comparing wild and hatchery-origin juveniles under natural conditions, demonstrating that physiological indicators, such as glucose, may not directly correspond to growth trajectories or overall fitness outcomes. Consistent with this, our findings indicate that both environmental variables and rearing origin contribute to observed physiological disparities, with their respective influences being modulated by stream-specific conditions. Collectively, these results underscore the necessity of interpreting haematological responses within a broader ecological context, as physiological markers are shaped by a complex interplay between an individual’s ontogeny and its immediate environment.

4.5. Cultivable Gut Bacteria

The fish gut microbiota is fundamental to host health, facilitating nutrient degradation and absorption, modulating immune system development, and synthesising essential vitamins and bioactive molecules. Furthermore, it serves as a critical line of defence against pathogens by maintaining intestinal barrier integrity [85,86,87]. Previous research has identified statistically significant disparities in microbiota composition between wild and hatchery-reared fish [88,89,90,91]. Interestingly, species richness and diversity in the gut microbiota of wild Salmo salar juveniles have been found to be significantly lower than in hatchery-reared individuals [88,92]. Given that hatchery-origin fish often exhibit lower post-stocking survival rates [93,94,95], the transition to natural environments likely imposes significant physiological stress. Such environmental stressors can detrimentally impact the health and fitness of salmonid fry by inducing dysbiosis in the gut microbiome [96,97]. Longitudinal studies (e.g., two months post-release) comparing S. salar parr from the same genetic population have shown that gut microbiota remains significantly different and is strongly influenced by the early rearing environment [92]. Our own preliminary findings align with this, revealing significant differences in the gut microbiota of S. trutta juveniles between wild and hatchery-reared groups. Five months post-release, the abundance of culturable (viable) bacteria in the gut of hatchery-reared fish remained significantly higher than in their wild counterparts across both studied streams. These microbial disparities could potentially confer phenotypic disadvantages, such as reduced disease resistance and impaired metabolic efficiency [98,99,100]. However, further research is required to characterise the predominant bacterial taxa in hatchery-reared S. trutta over longer post-stocking periods and to evaluate their specific impact on juvenile growth and overall fitness.

5. Conclusions

This study demonstrates that although hatchery-reared S. trutta juveniles do not significantly differ from wild individuals in terms of size or haematological parameters after two years in a natural environment, they exhibit slower growth rates and a higher prevalence of fin damage, both of which may adversely impact their subsequent life cycle. These findings suggest that fin erosion, coupled with a potentially protracted or less effective adaptation to wild conditions, constitutes a primary driver of the observed growth retardation. Furthermore, the fish gut microbiome appears to be significantly associated with the growth and physiological condition of reared individuals, as marked disparities in microbial composition were observed between wild and artificially reared juveniles. Longitudinal studies encompassing later life stages are essential to identify the decisive factors influencing long-term performance and to determine the extent to which these early-life physiological and ecological constraints manifest in adult populations.

Author Contributions

Conceptualization, S.S., V.R. and T.V.; Methodology, V.R., D.M., Ž.J. and V.S.-A.; Software, E.Š.-C.; Validation, V.R. and T.V.; Formal Analysis, V.R. and E.Š.-C.; Investigation, V.R., S.R., D.M., Ž.J. and V.S.-A.; Resources, V.R., S.R., D.M., Ž.J. and V.S.-A.; Data Curation, V.R., S.R., D.M., Ž.J., V.S.-A. and E.Š.-C.; Writing—Original Draft Preparation, V.R., S.R., D.M., Ž.J., V.S.-A. and E.Š.-C.; Writing—Review and Editing, V.R. and T.V.; Visualisation, V.R., S.R. and E.Š.-C.; Supervision, S.S. and V.R.; Project Administration, V.R.; Funding Acquisition, S.S. All authors have read and agreed to the published version of the manuscript.

Funding

This study was supported by the PhD in Ecology and Environmental Science of Nature Research Centre in collaboration with Vilnius University (PhD study contract No 2018-DOK-7).

Institutional Review Board Statement

All sampling and surveys were conducted in accordance with Lithuanian law. Sampling was carried out under permits obtained from the Environment Protection Agency, Lithuania (licence No.: 023 valid for 2019; 019 valid for 2020; 020 valid for 2021; and 031 valid for 2022).

Informed Consent Statement

Not applicable.

Data Availability Statement

The raw data supporting the conclusions of this article will be made available by the authors on request.

Acknowledgments

We are thankful to the State Fisheries Service under the Ministry of Agriculture of the Republic of Lithuania for their unwavering support and for providing us with S. trutta stocking material, which proved crucial to the success of this research.

Conflicts of Interest

The authors declare no conflicts of interest. The funders had no role in the design of this study; in the collection, analyses or interpretation of data; in the writing of the manuscript; or in the decision to publish the results.

Abbreviations

The following abbreviations are used in this manuscript:
ARSAlizarin Red S
CFFulton’s condition factor
RBCNumber of red blood cells
MCVThe mean cell volume
GLUThe amount of glucose
HCTHaematocrit value

References

  1. Worm, B.; Hilborn, R.; Baum, J.K.; Branch, T.A.; Collie, J.S.; Costello, C.; Fogarty, M.J.; Fulton, E.A.; Hutchings, J.A.; Jennings, S.; et al. Rebuilding global fisheries. Science 2009, 325, 578–585. [Google Scholar] [CrossRef] [PubMed]
  2. HELCOM. Sea Trout Populations and Rivers in the Baltic Sea; Helsinki Commission: Helsinki, Finland, 2022. [Google Scholar]
  3. Freyhof, J. Salmo trutta. The IUCN Red List of Threatened Species 2024, e.T19861A58301467. Available online: https://www.iucnredlist.org/species/19861/58301467 (accessed on 5 April 2026).
  4. Lejk, A.M.; Hliwa, P. Reproductive parameters of wild and hatchery-reared sea trout (Salmo trutta m. trutta L.) females from the Łeba River (southern Baltic Sea). J. Fish Biol. 2026, 1–10. [Google Scholar] [CrossRef] [PubMed]
  5. Natale, F.; Dentes De Carvalho Gaspar, N.; Harrop, M.; Guillen, J.; Frangoudes, K. Identifying fisheries dependent communities in EU coastal areas. Mar. Policy 2013, 42, 245–252. [Google Scholar] [CrossRef]
  6. HELCOM. Salmon and Sea Trout Populations and Rivers in Lithuania—HELCOM Assessment of Salmon (Salmo salar) and Sea Trout (Salmo trutta) Populations and Habitats in Rivers Flowing to the Baltic Sea; Baltic Sea Environment Proceedings No. 126B; HELCOM: Helsinki, Finland, 2011. [Google Scholar]
  7. Kesminas, V. Lietuvos Lašišinės Žuvys: Biologija, Ekologija ir Išteklių Apsauga; Gamtos Tyrimų Centras: Vilnius, Lithuania, 2023. [Google Scholar]
  8. Einum, S.; Fleming, I.A. Implications of stocking: Ecological interactions between wild and released salmonids. Nord. J. Freshw. Res. 2001, 75, 56–70. [Google Scholar]
  9. Fleming, I.A.; Petersson, E. The ability of released, hatchery salmonids to breed and contribute to the natural productivity of wild populations. Cnordic. J. Freshw. Res. 2001, 75, 71–98. 845–856. [Google Scholar]
  10. Frankham, R. Genetics and extinction. Biol. Conserv. 2005, 126, 131–140. [Google Scholar] [CrossRef]
  11. Araki, H.; Cooper, B.; Blouin, M.S. Genetic effects of captive breeding cause a rapid, cumulative fitness decline in the wild. Science 2007, 318, 100–103. [Google Scholar] [CrossRef]
  12. Taranger, G.L.; Carrillo, M.; Schulz, R.W.; Fontaine, P.; Zanuy, S.; Felip, A.; Weltzien, F.-A.; Dufour, S.; Karlsen, O.; Norberg, B.; et al. Control of puberty in farmed fish. Gen. Comp. Endocrinol. 2010, 165, 483–515. [Google Scholar] [CrossRef]
  13. Laikre, L.; Schwartz, M.K.; Waples, R.S.; Ryman, N. Compromising genetic diversity in the wild: Unmonitored large-scale release of plants and animals. Trends Ecol. Evol. 2010, 25, 520–529. [Google Scholar] [CrossRef]
  14. Teixeira, A.; Cortes, R.M.V. Diet of stocked and wild trout, Salmo trutta: Is there competition for resources? Folia Zool. 2006, 55, 61–73. [Google Scholar]
  15. Teixeira, A.; Cortes, R.M.V.; Oliveira, D. Habitat use by native and stocked trout (Salmo trutta L.) in two northeast streams, Portugal. Bull. Fr. Peche Piscic. 2006, 382, 1–18. [Google Scholar] [CrossRef]
  16. McMillan, J.R.; Morrison, B.; Chambers, N.; Carlson, S.M.; Hilborn, R. A global synthesis of peer-reviewed research on the effects of hatchery salmonids on wild salmonids. Fish. Manag. Ecol. 2023, 30, 3–18. [Google Scholar] [CrossRef]
  17. Harrison, H.L.; Aas, Ø.; Berseth, V.; Chance, T.; Dalby, K.L.; Denny, S.; Fabiano, M.T.; Johnson, N.; Kitching, T.; Kwong, L.E.; et al. A Review of a Decade of Anadromous Salmonid Hatchery (and Stocking) Research: Insights for Policy, Management and a Changing Climate. Fish Fish. 2026, 27, 431–450. [Google Scholar] [CrossRef]
  18. Fabiano, M.T.; Harrison, H.L. Beyond fish: Social outcomes of Maritimes region atlantic salmon hatcheries and stocking programs through a social-ecological systems lens. Fish. Res. 2025, 292, 107579. [Google Scholar] [CrossRef]
  19. Cowx, I.G. Stocking strategies. Fish. Manag. Ecol. 1994, 1, 15–31. [Google Scholar] [CrossRef]
  20. Skrupskelis, K.; Kesminas, V.; Stakėnas, S. The growth of brown trout (Salmo trutta fario L.) in different climatic regions of Lithuania. Acta Zool. Litu. 2006, 16, 282–292. [Google Scholar] [CrossRef]
  21. Virbickas, T.; Kazlauskienė, N.; Stakėnas, S.; Skrupskelis, K. Survival of hatchery reared 0+ sea trout in natural conditions. Žuvininkystė Lietuvoje 2010, 10, 269–280. [Google Scholar]
  22. Skrupskelis, K.; Stakėnas, S.; Virbickas, T.; Nika, N. Age and size of migrating Atlantic salmon, Salmo salar L. and sea trout, Salmo trutta L., smolts in Lithuanian rivers. Arch. Pol. Fish. 2012, 20, 255–266. [Google Scholar] [CrossRef]
  23. Gailiušis, B.; Jablonskis, J.; Kovalenkovienė, M. The Lithuanian Rivers: Hydrography and Runoff; Lithuanian Energy Institute: Kaunas, Lithuania, 2001. [Google Scholar]
  24. Crook, D.; O’Mahony, D.J.; Gillanders, B.M.; Munro, A.R.; Sanger, A.C. Quantitative measurement of calcein fluorescence for non-lethal, field-based discrimination of hatchery and wild fish. In Advances in Fish Tagging and Marking Technology; McKenzie, J., Parsons, B., Seitz, A.C., Kopf, R.K., Mesa, M., Phelps, Q., Eds.; American Fisheries Society: Bethesda, MD, USA, 2012; pp. 389–396. [Google Scholar]
  25. Unfer, K.; Pinter, K. Marking otoliths of brown trout (Salmo trutta L.) embryos with alizarin red S. J. Appl. Ichthyol. 2013, 29, 470–473. [Google Scholar] [CrossRef]
  26. Warren-Myers, F.; Dempster, T.; Swearer, S.E. Otolith mass marking techniques for aquaculture and restocking: Benefits and limitations. Rev. Fish Biol. Fish. 2018, 28, 485–501. [Google Scholar] [CrossRef]
  27. Caudron, A.; Champigneulle, A. Multiple marking of otoliths of brown trout (Salmo trutta L.) with alizarin red S to compare efficiency of stocking of three early life stages. Fish. Manag. Ecol. 2009, 16, 219–224. [Google Scholar] [CrossRef]
  28. Busack, C.A.; Currens, K.P. Genetic risks and hazards in hatchery operations: Fundamental concepts and issues. In Uses and Effects of Cultured Fishes in Aquatic Ecosystems; Schramm, H.L., Jr., Piper, R.G., Eds.; American Fisheries Society Symposium 15; American Fisheries Society: Bethesda, MD, USA, 1995; pp. 71–80. [Google Scholar]
  29. Waples, R.S. Dispelling some myths about hatcheries. Fisheries 1999, 24, 12–21. [Google Scholar] [CrossRef]
  30. Kottelat, M.; Freyhof, J. Handbook of European Freshwater Fishes; Kottelat, Cornol and Freyhof: Berlin, Germany, 2007. [Google Scholar]
  31. FishBase. Available online: https://www.fishbase.se (accessed on 5 April 2026).
  32. Thoresson, G. Guidelines for Coastal Monitoring: Fishery Biology; Kustrapport 1993:1; National Board of Fisheries, Institute of Coastal Research: Öregrund, Sweden, 1993; 35p. [Google Scholar]
  33. Ivanova, N.T. Atlas of the Fish Blood Cells: Comparative Morphology and Classification of Formed Elements of Fish Blood; Light and Food Industry Publishing House: Moscow, Russia, 1983; 184p, (In Russian with English Title Translation). [Google Scholar]
  34. Haney, D.C.; Hursh, D.A.; Mix, M.C.; Winton, J.R. Physiological and hematological changes in chum salmon artificially infected with erythrocytic necrosis virus. J. Aquat. Anim. Health 1992, 4, 48–57. [Google Scholar] [CrossRef]
  35. Elliott, J.M. The growth rate of brown trout (Salmo trutta L.) fed on maximum rations. J. Anim. Ecol. 1975, 44, 805–821. [Google Scholar] [CrossRef]
  36. Elliott, J.M.; Hurley, M.A. A functional model for maximum growth of Atlantic salmon parr, Salmo salar, from two populations in northeast England. Funct. Ecol. 1997, 11, 592–603. [Google Scholar] [CrossRef]
  37. Jonsson, B.; Jonsson, N. A review of the likely effects of climate change on anadromous Atlantic salmon Salmo salar and brown trout Salmo trutta with particular reference to water temperature and flow. J. Fish Biol. 2009, 75, 2381–2447. [Google Scholar] [CrossRef] [PubMed]
  38. Spence, B.C.; Lomnicky, G.A.; Hughs, R.M.; Novitzki, R.P. An Ecosystem Approach to Salmonid Conservation; TR-4501-96-6057; ManTech Environmental Research Services Corp.: Corvallis, OR, USA, 1996; 23p. [Google Scholar]
  39. Waldrop, T.; Summerfelt, S.T.; Mazik, P.M.; Kenney, P.B.; Good, C. The effects of swimming exercise and dissolved oxygen on growth performance, fin condition and survival of rainbow trout (Oncorhynchus mykiss). Aquac. Res. 2020, 51, 2582–2589. [Google Scholar] [CrossRef]
  40. Finstad, A.G.; Forseth, T.; Næsje, T.F.; Ugedal, O. The importance of ice cover for energy turnover in juvenile Atlantic salmon. J. Anim. Ecol. 2004, 73, 959–966. [Google Scholar] [CrossRef]
  41. Elliott, J.M. A comparative study of the relationship between light intensity and feeding activity in brown trout (Salmo trutta) and Arctic charr (Salvelinus alpinus). Freshw. Biol. 2011, 56, 1962–1972. [Google Scholar] [CrossRef]
  42. Schoener, T.W. Field experiments on interspecific competition. Am. Nat. 1983, 122, 240–285. [Google Scholar] [CrossRef]
  43. Fausch, K.D.; Torgersen, C.E.; Baxter, C.V.; Li, H.W. Landscapes to riverscapes: Bridging the gap between research and conservation of stream fishes. BioScience 2002, 52, 483–498. [Google Scholar] [CrossRef]
  44. Museth, J.; Borgstrøm, R.; Brittain, J.E. Diet overlap between introduced European minnow (Phoxinus phoxinus) and young brown trout (Salmo trutta) in the lake Øvre Heimdalsvatn: A result of abundant resources or forced niche overlap? In The Subalpine Lake Ecosystem, Øvre Heimdalsvatn, and Its Catchment: Local and Global Changes over the Last 50 Years; Brittain, J.E., Borgstrøm, R., Eds.; Developments in Hydrobiology 211; Springer: Dordrecht, the Netherlands, 2010; Volume 211, pp. 93–100. [Google Scholar] [CrossRef]
  45. Höjesjö, J.; Johnsson, J.I.; Bohlin, T. Habitat complexity reduces the growth of aggressive and dominant brown trout (Salmo trutta) relative to subordinates. Behav. Ecol. Sociobiol. 2004, 56, 286–289. [Google Scholar] [CrossRef]
  46. Klemetsen, A.; Amundsen, P.-A.; Dempson, J.B.; Jonsson, B.; Jonsson, N.; O’Connell, M.F.; Mortensen, E. Atlantic salmon Salmo salar L., brown trout Salmo trutta L. and Arctic charr Salvelinus alpinus (L.): A review of aspects of their life histories. Ecol. Freshw. Fish 2003, 12, 1–59. [Google Scholar] [CrossRef]
  47. Jonsson, B.; Jonsson, N. Cultured Atlantic salmon in nature: A review of their ecology and interaction with wild fish. ICES J. Mar. Sci. 2006, 63, 1162–1181. [Google Scholar] [CrossRef]
  48. Jensen, L.F.; Hansen, M.M.; Pertoldi, C.; Holdensgaard, G.; Mensberg, K.-L.D.; Loeschcke, V. Local adaptation in brown trout early life-history traits: Implications for climate change adaptability. Proc. R. Soc. B 2008, 275, 2859–2868. [Google Scholar] [CrossRef] [PubMed]
  49. Bosakowski, T.; Wagner, E.J. A survey of trout fin erosion, water quality, and rearing conditions at state fish hatcheries in Utah. J. World Aquacult. Soc. 1994, 25, 308–316. [Google Scholar] [CrossRef]
  50. Ellis, T.; North, B.; Scott, A.P.; Bromage, N.R.; Porter, M.; Gadd, D. The relationships between stocking density and welfare in farmed rainbow trout. J. Fish Biol. 2002, 61, 493–531. [Google Scholar] [CrossRef]
  51. Latremouille, D.N. Fin erosion in aquaculture and natural environments. Rev. Fish. Sci. 2003, 11, 315–335. [Google Scholar] [CrossRef]
  52. Kazlauskienė, N.; Skrodenytė-Arbačiauskienė, V.; Virbickas, T.; Stakėnas, S.; Savostinienė, L.; Vosylienė, Z. Dirbtinai Išaugintų Lašišų Mailiaus ir Jauniklių Išgyvenimo Gamtinėmis Sąlygomis Įvertinimas ir Rekomendacijų dėl Skirtingo Amžiaus Lašišų Auginimo ir Išleidimo į Upes Strategijos Parengimas; Ataskaita; Lietuvos Hidrobiologų Draugija: Vilnius, Lithuania, 2014; 67p. [Google Scholar]
  53. Ellis, T.; Hoyle, I.; Oidtmann, B.; Turnbull, J.F.; Jacklin, T.E.; Knowles, T.G. Further development of the “Fin Index” method for quantifying fin erosion in rainbow trout. Aquaculture 2009, 289, 283–288. [Google Scholar] [CrossRef]
  54. Stankevičiūtė, M.; Bučaitė, A.; Pažusienė, J.; Jurgėlėnė, Ž.; Dainys, J. Impact of fin erosion on biomarker responses in Salmo trutta: Implications for the reliability of biological effects monitoring in aquatic environments. Fishes 2026, 11, 181. [Google Scholar] [CrossRef]
  55. Kazlauskienė, N.; Skrodenytė-Arbačiauskienė, V.; Leliūna, E. Šlakių (Salmo trutta trutta) pelekų nekrozė Žeimenos lašišinių žuvų veislyne. Žuvininkystė Liet. 2008, 8, 271–278. [Google Scholar]
  56. Abbott, J.C.; Dill, L.M. Patterns of Aggressive Attack in Juvenile Steelhead Trout (Salmo gairdneri). Can. J. Fish. Aquat. Sci. 1985, 42, 1702–1706. [Google Scholar] [CrossRef]
  57. Pelis, R.M.; McCormick, S.D. Fin development in stream- and hatchery-reared Atlantic salmon. Aquaculture 2003, 220, 525–536. [Google Scholar] [CrossRef]
  58. Yue, G.H.; Wen, Y.F.; Sun, F.; Wang, L.; Yang, Z.; Pang, H.Y. Occurrence of dorsal fin and opercular deformities and their effects on body weight in Asian seabass. Aquaculture 2022, 561, 738694. [Google Scholar] [CrossRef]
  59. Petersson, E.; Karlsson, L.; Ragnarsson, B.; Bryntesson, M.; Berglund, A.; Stridsman, S.; Jonsson, S. Fin erosion and injuries in relation to adult recapture rates in cultured smolts of Atlantic salmon and brown trout. Can. J. Fish. Aquat. Sci. 2013, 70, 915–921. [Google Scholar] [CrossRef]
  60. McLean, E.; Campbell, K.B.; Kuhn, D.D.; Tlusty, M.F.; Barrows, F.T. The impact of marine resource-free diets on quality attributes of Atlantic salmon. Fishes 2024, 9, 37. [Google Scholar] [CrossRef]
  61. Imsland, A.K.D.; Methúsalemsson, H. The effects of different feed ration levels on growth, welfare rating, and early maturation in juvenile Atlantic salmon (Salmo salar). Fishes 2024, 9, 70. [Google Scholar] [CrossRef]
  62. Moreira, M.; Schrama, D.; Farinha, A.P.; Cerqueira, M.; De Magalhães, C.R.; Carrilho, R.; Rodrigues, P. Fish Pathology Research and Diagnosis in Aquaculture of Farmed Fish; A Proteomics perspective. Animals 2021, 11, 125. [Google Scholar] [CrossRef]
  63. Lorenzen, K.; Beveridge, M.C.M.; Mangel, M. Cultured fish: Integrative biology and management of domestication and interactions with wild fish. Biol. Rev. 2012, 87, 639–660. [Google Scholar] [CrossRef]
  64. Weiss, S.; Schmutz, S. Performance of Hatchery-Reared Brown Trout and Their Effects on Wild Fish in Two Small Austrian Streams. Trans. Am. Fish. Soc. 1999, 128, 302–316. [Google Scholar] [CrossRef]
  65. Reiser, S.; Illing, B.; Pohlmann, D.M.; Focken, U. Environmental enrichment during early rearing of salmonids: Practical implementation in commercial hatcheries. Aquaculture 2026, 611, 742995. [Google Scholar] [CrossRef]
  66. Ahmed, I.; Reshi, Q.M.; Fazio, F. The influence of endogenous and exogenous factors on hematological parameters in different fish species: A review. Aquac. Int. 2020, 28, 869–899. [Google Scholar] [CrossRef]
  67. Seibel, H.; Baßmann, B.; Rebl, A. Blood will tell: What hematological analyses can reveal about fish welfare. Front. Vet. Sci. 2021, 8, 616955. [Google Scholar] [CrossRef] [PubMed]
  68. Sharma, S.; Andotra, M.; Kaur, A. Cytogenotoxicity and hematological alterations induced by the environmentally relevant concentration of low-density polyethylene microplastics and nickel oxide nanoparticles in Cirrhinus mrigala (Ham.). J. Appl. Toxicol. 2025, 44, 1416–1425. [Google Scholar] [CrossRef]
  69. Han, H.; Wang, Z.; Wang, J.; Wang, T.; Li, Y.; Guan, D.; Sun, H. Impact of high dietary cornstarch level on growth, antioxidant response, and immune status in GIFT tilapia Oreochromis niloticus. Sci. Rep. 2021, 11, 6678. [Google Scholar] [CrossRef] [PubMed]
  70. Callet, T.; Hu, H.; Larroquet, L.; Surget, A.; Liu, J.; Plagnes-Juan, E.; Maunas, P.; Turonnet, N.; Mennigen, J.A.; Bobe, J.; et al. Exploring the impact of a low-protein high-carbohydrate diet in mature broodstock of a glucose-intolerant teleost, the rainbow trout. Front. Physiol. 2020, 11, 303. [Google Scholar] [CrossRef]
  71. Bojarski, B.; Witeska, M.; Kondera, E. Blood biochemical biomarkers in fish toxicology—A review. Animals 2025, 15, 965. [Google Scholar] [CrossRef]
  72. Biswal, A.; Srivastava, P.P.; Krishna, G.; Paul, T.; Pal, P.; Gupta, S.; Varghese, T.; Jayant, M. An integrated biomarker approach for explaining the potency of exogenous glucose on transportation-induced stress in Labeo rohita fingerlings. Sci. Rep. 2021, 11, 5713. [Google Scholar] [CrossRef]
  73. Vaage, B.M.; Larson, S.A.L.; Fischer, E.S.; Khan, F.O.; Hughes, J.S. Can portable glucose and lactate meters be a useful tool in quantifying stress of juvenile Chinook salmon? Conserv. Physiol. 2023, 11, coad046. [Google Scholar] [CrossRef]
  74. Ma, Q.; Zhang, R.; Wei, Y.; Liang, M.; Xu, H. Effects of intermittent and chronic hypoxia on fish size and nutrient metabolism in tiger puffer (Takifugu rubripes). Animals 2024, 14, 2470. [Google Scholar] [CrossRef]
  75. Witeska, M.; Kondera, E.; Bojarski, B. Hematological and hematopoietic analysis in fish toxicology—A review. Animals 2023, 13, 2625. [Google Scholar] [CrossRef]
  76. Krishnan, J.; Rohner, N. Sweet fish: Fish models for the study of hyperglycemia and diabetes. J. Diabetes 2019, 11, 193–203. [Google Scholar] [CrossRef] [PubMed]
  77. Burgos-Aceves, M.A.; Lionetti, L.; Faggio, C. Multidisciplinary haematology as prognostic device in environmental and xenobiotic stress-induced response in fish. Sci. Total Environ. 2019, 670, 1170–1183. [Google Scholar] [CrossRef] [PubMed]
  78. Witeska, M.; Kondera, E.; Ługowska, K.; Bojarski, B. Hematological methods in fish—Not only for beginners. Aquaculture 2022, 547, 737498. [Google Scholar] [CrossRef]
  79. Gerhard, M.; Koussoroplis, A.M.; Raatz, M.; Pansch, C.; Fey, S.B.; Vajedsamiei, J.; Calderó-Pascual, M.; Cunillera-Montcusí, D.; Juvigny-Khenafou, N.P.D.; Polazzo, F.; et al. Environmental variability in aquatic ecosystems: Avenues for future multifactorial experiments. Limnol. Oceanogr. Lett. 2022, 7, 146–162. [Google Scholar] [CrossRef]
  80. Nabi, N.; Ahmed, I.; Wani, G.B. Hematological and serum biochemical reference intervals of rainbow trout, Oncorhynchus mykiss cultured in Himalayan aquaculture: Morphology, morphometrics and quantification of peripheral blood cells. Saudi J. Biol. Sci. 2022, 29, 2942–2957. [Google Scholar] [CrossRef]
  81. Sheikh, Z.A.; Ahmed, I.; Jan, K.; Nabi, N.; Fazio, F. Haematological profile, blood cell characteristic and serum biochemical composition of cultured brown trout, Salmo trutta fario with respect to sex. Heliyon 2022, 8, e10247. [Google Scholar] [CrossRef]
  82. Casanovas, P.; Walker, S.P.; Johnston, H.; Johnston, C.; Symonds, J.E. Comparative assessment of blood biochemistry and haematology normal ranges between Chinook salmon (Oncorhynchus tshawytscha) from seawater and freshwater farms. Aquaculture 2021, 537, 736464. [Google Scholar] [CrossRef]
  83. Owen, C.A.; Casanovas, P.; Schattschneider, J.; Dick, G.; Walker, S.P.; Symonds, J.E. Comparing blood biochemistry and haematology normal ranges of Chinook salmon (Oncorhynchus tshawytscha) from different production systems. Aquaculture 2025, 598, 742016. [Google Scholar] [CrossRef]
  84. Parrino, V.; Cappello, T.; Costa, G.; Cannavà, C.; Sanfilippo, M.; Fazio, F.; Fasulo, S. Comparative study of haematology of two teleost fish (Mugil cephalus and Carassius auratus) from different environments and feeding habits. Eur. Zool. J. 2018, 85, 194–200. [Google Scholar] [CrossRef]
  85. Butt, R.L.; Volkoff, H. Gut microbiota and energy homeostasis in fish. Front. Endocrinol. 2019, 10, 9. [Google Scholar] [CrossRef] [PubMed]
  86. Perry, W.B.; Lindsay, E.; Payne, C.J.; Brodie, C.; Kazlauskaite, R. The role of the gut microbiome in sustainable teleost aquaculture. Proc. R. Soc. B Biol. Sci. 2020, 287, 20200184. [Google Scholar] [CrossRef] [PubMed]
  87. Diwan, A.D.; Harke, S.N.; Panche, A.N. Host-microbiome interaction in fish and shellfish: An overview. Fish Shellfish Immunol. Rep. 2023, 4, 100091. [Google Scholar] [CrossRef] [PubMed]
  88. Lavoie, C.; Courcelle, M.; Redivo, B.; Derome, N. Structural and compositional mismatch between captive and wild Atlantic salmon (Salmo salar) parrs’ gut microbiota highlights the relevance of integrating molecular ecology for management and conservation methods. Evol. Appl. 2018, 11, 1671–1685. [Google Scholar] [CrossRef]
  89. Liu, X.; Fan, Y.; Mo, T.; Chen, Q.; Chen, W. Comparative study of the gut microbiota community between farmed and wild Mastacembelus armatus (Zig-Zag Eel). Metabolites 2022, 12, 1193. [Google Scholar] [CrossRef]
  90. Mugetti, D.; Pastorino, P.; Beltramo, C.; Audino, T.; Arillo, A.; Esposito, G.; Prearo, M.; Bertoli, M.; Pizzul, E.; Bozzetta, E.; et al. The gut microbiota of farmed and wild brook trout (Salvelinus fontinalis): Evaluation of feed-related differences. using 16S rRNA gene metabarcoding. Microorganisms 2023, 11, 1636. [Google Scholar] [CrossRef]
  91. Lanara, M.; Elias Asimakis, E.; Bel Mokhtar, N.B.; Koutsodima, P.; Batargias, C.; Toskas, K.; Panagiota Stathopoulou, P.; Tsiamis, G. Comparative analysis of the intestinal microbiota in wild and aquaculture populations of Sparus aurata. Microorganisms 2026, 14, 708. [Google Scholar] [CrossRef]
  92. Lavoie, C.; Wellband, K.; Perreault, A.; Bernatchez, L.; Derome, N. Artificial rearing of Atlantic salmon juveniles for supportive breeding programs induces long-term effects on gut microbiota after stocking. Microorganisms 2021, 9, 1932. [Google Scholar] [CrossRef]
  93. Kristiansen, T.S.; Ottera, H.; Svasand, T. Size- dependent mortality of juvenile Atlantic cod, estimated from recaptures of released reared cod and tagged wild cod. J. Fish Biol. 2000, 56, 687–712. [Google Scholar] [CrossRef]
  94. Ford, M.J. Selection in captivity during supportive breeding may reduce fitness in the wild. Conserv. Biol. 2002, 16, 815–825. [Google Scholar] [CrossRef]
  95. Stringwell, R.; Lock, A.; Stutchbury, C.J.; Baggett, E.; Taylor, J.; Gough, P.J.; de Leaniz, C.G. Maladaptation and phenotypic mismatch in hatchery - reared Atlantic salmon Salmo salar released in the wild. J. Fish Biol. 2014, 85, 1927–1945. [Google Scholar] [CrossRef]
  96. Uren Webster, T.M.; Rodriguez-Barreto, D.; Castaldo, G.; Gough, P.; Consuegra, S.; Garcia de Leaniz, C. Environmental plasticity and colonisation history in the Atlantic salmon microbiome: A translocation experiment. Mol. Ecol. 2020, 29, 886–898. [Google Scholar] [CrossRef] [PubMed]
  97. Uren Webster, T.M.; Consuegra, S.; Garcia de Leaniz, C. Early life stress causes persistent impacts on the microbiome of Atlantic salmon. Comp. Biochem. Physiol. Part D Genom. Proteom. 2021, 40, 100888. [Google Scholar] [CrossRef]
  98. See, M.S.; Ching, X.L.; Khoo, S.C.; Abidin, S.Z.; Sonne, C.; Ma, N.L. Aquatic microbiomes under stress: The role of gut microbiota in detoxification and adaptation to environmental exposures. J. Hazard. Mater. Adv. 2025, 17, 100612. [Google Scholar] [CrossRef]
  99. Shen, Y.; Fan, N.; Ma, S.X.; Cheng, X.; Yang, X.; Wang, G. Gut microbiota dysbiosis: Pathogenesis, diseases, prevention, and therapy. MedComm 2025, 6, e70168. [Google Scholar] [CrossRef]
  100. Xavier, R.; Severino, R.; Silva, S.M. Signatures of dysbiosis in fish microbiomes in the context of aquaculture. Rev. Aquac. 2024, 16, 706–731. [Google Scholar] [CrossRef]
Figure 1. Study sites in the Plaštaka and Šešuola streams. Black dots show artificially reared S. trutta stocking places.
Figure 1. Study sites in the Plaštaka and Šešuola streams. Black dots show artificially reared S. trutta stocking places.
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Figure 3. The otoliths (saggittae) of non-marked (A) and ARS-marked (B) Salmo trutta of 1+ age in November (2020) under green illumination (4x magnification).
Figure 3. The otoliths (saggittae) of non-marked (A) and ARS-marked (B) Salmo trutta of 1+ age in November (2020) under green illumination (4x magnification).
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Figure 4. Fins (pectoral, dorsal, caudal) damage of Salmo trutta juveniles: intact (A,C,E); reduced or absent (B,D,F).
Figure 4. Fins (pectoral, dorsal, caudal) damage of Salmo trutta juveniles: intact (A,C,E); reduced or absent (B,D,F).
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Figure 6. Raw total frequencies of fin state by fin location (left column: caudal (A,D), middle column: dorsal (B,E), right column: pectoral (C,F), age (top row: 0+ (AC), bottom row: 1+ (DF) and origin (wild, reared) of S. trutta juveniles. The small white letters indicate homogenous groups of estimated means in pairwise comparisons (see Table 11 for effect tests; damaged and absent fins were analysed jointly).
Figure 6. Raw total frequencies of fin state by fin location (left column: caudal (A,D), middle column: dorsal (B,E), right column: pectoral (C,F), age (top row: 0+ (AC), bottom row: 1+ (DF) and origin (wild, reared) of S. trutta juveniles. The small white letters indicate homogenous groups of estimated means in pairwise comparisons (see Table 11 for effect tests; damaged and absent fins were analysed jointly).
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Table 1. Hydrological characteristics of the streams studied [23].
Table 1. Hydrological characteristics of the streams studied [23].
StreamLength (km)Catchment Size (km2)Mean Annual Flow (m3s−1)Average Slope in the Lower Reaches (3.0–3.5 km to the Mouth), (km−1)Mean Width, (m)Mean Depth, (m)
Plaštaka16.189.30.676.03.60.3
Šešuola13.691.20.646.14.30.4
Table 2. Stocked S. trutta specimens in different streams and years: number of stocked specimens (N); fish total length (TL, cm); fish total weight (Q, g).
Table 2. Stocked S. trutta specimens in different streams and years: number of stocked specimens (N); fish total length (TL, cm); fish total weight (Q, g).
YearN (Šešuola)N (Plaštaka)TL (Mean ± SD)Q (Mean ± SD)Release Date
2019150015003.63 ± 0.220.40 ± 0.0720 May 2019
2020200020005.38 ± 0.571.40 ± 0.4121 May 2020
2021200020004.11 ± 0.280.67 ± 0.1920 May 2021
2022200020004.97 ± 0.351.10 ± 0.2320 May 2022
Table 3. Numbers of sampled S. trutta in studied streams 2019–2022 for growth assessment: sampling year; number of sampled wild vs. reared specimens of age 0+ and 1+.
Table 3. Numbers of sampled S. trutta in studied streams 2019–2022 for growth assessment: sampling year; number of sampled wild vs. reared specimens of age 0+ and 1+.
RiverYear0+ (Wild/Reared)1+ (Wild/Reared)
Šešuola2019275 (90/185)-
2020157 (86/71)56 (47/9)
202198 (68/30)16 (16/0)
2022107 (56/51)61 (25/36)
Plaštaka201952 (38/14)-
2020116 (51/65)49 (42/7)
2021116 (64/52)14 (13/1)
2022184 (94/90)47 (37/10)
Table 5. Numbers of sampled S. trutta in studied streams 2019–2022 for blood parameters assessment: sampling year; number of sampled wild vs. reared specimens of age 0+ and 1+.
Table 5. Numbers of sampled S. trutta in studied streams 2019–2022 for blood parameters assessment: sampling year; number of sampled wild vs. reared specimens of age 0+ and 1+.
StreamYear0+ (Wild/Reared)1+ (Wild/Reared)
Šešuola201931/17-
202024/2047/9
20229/263/32
Plaštaka201936/12-
202022/2843/7
202240/2519/6
Table 7. The annual averages of measured water temperatures (T, °C) in the studied Šešuola and Plaštaka streams.
Table 7. The annual averages of measured water temperatures (T, °C) in the studied Šešuola and Plaštaka streams.
YearŠešuola, (Mean ± SD)Plaštaka (Mean ± SD)
201914.71 ± 3.7112.87 ± 3.19
202014.18 ± 5.1812.72 ± 4.65
202215.27 ± 5.4513.64 ± 5.32
Table 8. Fish species abundance (A, ind./100 m2), and percentage biomass (B, kg/100 m2) in studied streams.
Table 8. Fish species abundance (A, ind./100 m2), and percentage biomass (B, kg/100 m2) in studied streams.
NoFish SpeciesŠešuolaPlaštaka
ABAB
1Abramis brama0.70.10.00.0
2Alburnoides bipunctatu0.00.02.5< 0.1
3Alburnus alburnus0.3<0.12.5<0.1
4Anguilla Anguilla0.00.00.20.2
5Barbatula barbatula15.70.11.6<0.1
6Cobitis taenia0.3<0.10.2<0.1
7Cottus gobio6.70.13.6<0.1
8Esox lucius0.30.10.20.1
9Gasterosteus aculeatus0.3<0.10.2<0.1
10Gobio gobio22.70.20.4<0.1
11Leuciscus leuciscus0.3<0.10.2<0.1
12Misgurnus fossilis0.00.00.2<0.1
13Perca fluviatilis25.31.32.0<0.1
14Phoxinus phoxinus33.30.312.20.1
15Rhodeus sericeus16.0<0.12.4<0.1
16Rutilus rutilus36.30.24.70.1
17Salmo salar0.3<0.10.2<0.1
18Salmo trutta23.30.727.60.7
19Squalius cephalus1.3<0.10.90.1
20Thymallus thymallus0.00.00.2<0.1
21Tinca tinca0.00.00.2<0.1
Total183.13.162.21.3
Table 9. Mean values of total length and weight of reared vs. wild Salmo trutta fry during the stocking period in 2019–2022. Statistical differences (p-value, Man-Whitney U-test) between reared and wild fry.
Table 9. Mean values of total length and weight of reared vs. wild Salmo trutta fry during the stocking period in 2019–2022. Statistical differences (p-value, Man-Whitney U-test) between reared and wild fry.
StreamYearRearedWildp Value
Total length (cm)
Plaštaka20193.63 ± 0.223.10 ± 0.25<0.001
Plaštaka20205.38 ± 0.574.79 ± 0.670.032
Šešuola20193.63 ± 0.223.48 ± 0.260.030
Šešuola20205.38 ± 0.573.44 ± 0.56<0.001
Šešuola20224.97 ± 0.353.96 ± 0.54<0.001
Weight (g)
Plaštaka20190.40 ± 0.070.21 ± 0.27<0.001
Plaštaka20201.40 ± 0.411.08 ± 0.440.025
Šešuola20190.40 ± 0.070.32 ± 0.090.006
Šešuola20201.40 ± 0.410.33 ± 0.27<0.001
Šešuola20221.10 ± 0.230.54 ± 0.23<0.001
Table 10. Frequency of fin damage among reared and wild S. trutta juveniles. Statistical differences (Chi square, p-value) between reared and wild juveniles.
Table 10. Frequency of fin damage among reared and wild S. trutta juveniles. Statistical differences (Chi square, p-value) between reared and wild juveniles.
FinRearedWildp Value
0+N = 142N = 314
Pectoral85 (59.9%)14 (4.5%)<0.001
Dorsal49 (34.5%)62 (19.7%)<0.001
Caudal34 (23.9%)7 (2.2%)<0.001
Total107 (75.4%)74 (23.6%)<0.001
1+N = 63N = 180
Pectoral33 (52.4%)27 (15.0%)<0.001
Dorsal30 (47.6%)57 (31.7%)0.023
Caudal22 (34.9%)8 (4.4%)<0.001
Total45 (71.4%)70 (38.9%)<0.001
Table 11. Results of forward-stepwise GLMM testing the effects of fin location (pectoral, dorsal, caudal), Age (0+ vs. 1+), and Origin (reared vs. wild) effects on the frequency of fin damage in S. trutta juveniles. Significant effects (p < 0.05) are in bold.
Table 11. Results of forward-stepwise GLMM testing the effects of fin location (pectoral, dorsal, caudal), Age (0+ vs. 1+), and Origin (reared vs. wild) effects on the frequency of fin damage in S. trutta juveniles. Significant effects (p < 0.05) are in bold.
TermΧ2Dfp
Fin location68.52<0.0001
Age15.610.0001
Origin34.41<0.0001
Fin location: Origin54.52<0.0001
Fin location: Age0.020.9783
Age: Origin0.010.9344
Fin location: Age: Origin6.520.0380
Table 12. Number (Log10 CFU/g) of cultivable gut bacteria in Salmo trutta juveniles from the Šešuola and Plaštaka streams in 2019, five months after stocking.
Table 12. Number (Log10 CFU/g) of cultivable gut bacteria in Salmo trutta juveniles from the Šešuola and Plaštaka streams in 2019, five months after stocking.
StreamRearedWild
Šešuola7.3 ± 0.16.9 ± 0.1
Plaštaka7.7 ± 0.17.1 ± 0.1
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Rakauskas, V.; Račkauskas, S.; Montvydienė, D.; Jurgelėnė, Ž.; Šidagytė-Copilas, E.; Skrodenytė-Arbačiauskienė, V.; Stakėnas, S.; Virbickas, T. Artificially Reared Salmo trutta Fry in a Natural Environment: Growth and Fitness Compared to Wild Specimens. Biology 2026, 15, 630. https://doi.org/10.3390/biology15080630

AMA Style

Rakauskas V, Račkauskas S, Montvydienė D, Jurgelėnė Ž, Šidagytė-Copilas E, Skrodenytė-Arbačiauskienė V, Stakėnas S, Virbickas T. Artificially Reared Salmo trutta Fry in a Natural Environment: Growth and Fitness Compared to Wild Specimens. Biology. 2026; 15(8):630. https://doi.org/10.3390/biology15080630

Chicago/Turabian Style

Rakauskas, Vytautas, Simonas Račkauskas, Danguolė Montvydienė, Živilė Jurgelėnė, Eglė Šidagytė-Copilas, Vesta Skrodenytė-Arbačiauskienė, Saulius Stakėnas, and Tomas Virbickas. 2026. "Artificially Reared Salmo trutta Fry in a Natural Environment: Growth and Fitness Compared to Wild Specimens" Biology 15, no. 8: 630. https://doi.org/10.3390/biology15080630

APA Style

Rakauskas, V., Račkauskas, S., Montvydienė, D., Jurgelėnė, Ž., Šidagytė-Copilas, E., Skrodenytė-Arbačiauskienė, V., Stakėnas, S., & Virbickas, T. (2026). Artificially Reared Salmo trutta Fry in a Natural Environment: Growth and Fitness Compared to Wild Specimens. Biology, 15(8), 630. https://doi.org/10.3390/biology15080630

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