The data in this research were taken from multiple sites, on-farm and on-station, involving several emmer and einkorn cultivars. Since the basis of the on-farm trial system was a participatory approach and relied on farmers’ preferences, some varieties at some sites were not cultivated in two consecutive years. Each year was treated as a separate trial system; the data were analyzed as a whole dataset and as a subset with complete year replication. The results discussed in the following section start with the effects of genotype, crop year, growing site, and meteorological conditions on the PC and PA content in the sites Martonvásár and Želiezovce. Then, the second part of this section will focus on the effects of genotype and crop year on the ancient wheats’ PC and PA content, including all sites.
3.1. Total, Free, and Bound Phenolic Compound Concentrations (TPs, FPs, and BPs)
In the Martonvásár test location (which was managed conventionally, but without chemical pesticide treatment), the average values of the two years (2019 and 2020) showed that the highest mean total PC was detected in an emmer cultivar with 826 µg FAE g
−1 DM (GT-1669) (
Table 2). However, a similarly high value was observed in the control common wheat samples with 869 µg FAE g
−1 DM for Mv Káplár and 739 µg FAE g
−1 DM for Mv Uncia in 2019 and 2020 (
Figure 2).
The TP values of emmer landraces varied between 413 µg FAE g
−1 DM (GT-831) and 826 µg FAE g
−1 DM (GT−1 669). At the same time, all einkorn landraces achieved lower values, ranging from 369 µg FAE g
−1 DM (Mv Esztena) to 553 µg FAE g
−1 DM (Mv Menket). The TP content was lower in 2020 (
Figure 2) for all einkorn cultivars and most emmer cultivars (GT-1400, GT-1971, GT-831, Holland, Mv Hegyes) than in 2019. On the contrary, some emmer cultivars (GT-143, GT-1669, GT-381) showed higher TP values in 2020.
The results of the on-farm experiments conducted under organic conditions with four varieties in the same years in Želiezovce (
Table 3,
Figure 3) showed lower TP contents in einkorn (209 µg FAE g
−1 DM (Mv Alkor) and emmer varieties, ranging from 218 µg FAE g
−1 DM (Mv Hegyes) to 408 µg FAE g
−1 DM (GT-1400), averaged over the two years. Emmer GT-831 at this site showed significantly lower TP in 2020 (
Figure 3). This cultivar was also present in Martonvásár and showed a similar trend. It is noteworthy that apart from these two sites, one of the emmer landraces in Füzesgyarmat under organic on-farm conditions in 2019 reached the highest TP content value with 1254 µg FAE g
−1 DM (GT-831).
In our research, the differences in FPs between emmer and einkorn cultivars were significant in Martonvásár. The results revealed that control common bread wheat had high FP concentrations (121 µg FAE g−1 DM, Mv Káplár and 100 µg FAE g−1 DM, Mv Uncia in 2019 and 2020, respectively). The concentration of FPs in emmer GT-1669 was also higher (108 µg FAE g−1 DM) than in other ancient wheat species’ varieties. Meanwhile, einkorn had the lowest values (47 µg FAE g−1 DM, Mv Esztena) under conventional conditions. The proportion of free phenolic fractions relative to the total phenolic content varied between 12.5% in the emmer cultivar GT-1400 and 15.0% in GT-1669, indicating genotype-dependent variation in phenolic compound distribution.
BPs accounted for 86.6% of the TPs, with the highest concentration detected in the control wheat (748 µg FAE g−1 DM, Mv Káplár in 2019 and 638 µg FAE g−1 DM, Mv Uncia in 2020) grown at Martonvásár. The GT-1669 emmer variety was noteworthy, with a mean 719 µg FAE g−1 DM result (in 2019 and 2020), whereas half of the emmer varieties had higher BP concentrations than einkorns. The einkorn cultivars’ values ranged from 322 µg FAE g−1 DM in Mv Esztena to 483 µg FAE g−1 DM in Mv Menket. BPs contributed to the TPs in the range of 84.9% (emmer GT-1971) to 87.5% (emmer GT-1400). The control bread wheat had the highest TP concentration, followed by emmer, while einkorn (Mv Esztena) had the lowest value measured in this conventional on-station trial. Among the same cultivars of ancient wheat (Mv Alkor einkorn, GT 1400, GT 831, Mv Hegyes emmer) under organic conditions at Želiezovce, emmer varieties also produced higher TP values than einkorn cultivars.
The effect of year on TP concentrations was more pronounced at Martonvásár than at Želiezovce. The meteorological data from each growing site showed significant temperature differences between the years (
Appendix A,
Figure A2). Total rainfall was higher in 2019 than in 2020, although the difference in rainfall on rainy days was not as great. The average temperature and precipitation were higher in 2019 than in 2020 at both growing sites. The meteorological data are in line with our findings from samples originating from Martonvásár, as most varieties produced more TPs and acids in 2019.
A previous study of ÖMKi in 2018 revealed significant differences in TP content between einkorn and emmer, which are in line with our current results [
4]. The average TP content was higher in emmer (2519 GAE g
−1 DM) than in einkorn (2490 GAE g
−1 DM) [
4]. In partial agreement with the results of our research, Lacko-Bartošová et al. [
45] found the highest TP content in bread wheat (1903 µg FAE g
−1 DM) rather than in emmer cultivars (e.g., 1669 µg FAE g
−1 DM, Farvento). Serpen et al. [
46] reported that emmer had higher TP content than einkorn and bread wheat controls. In contrast, Lachman reported the opposite trend, with spring wheat (502–601 µg GAE g
−1 DM) having lower concentrations of total TPs than emmer (584–692 µg GAE g
−1 DM) and einkorn (507–612 µg GAE g
−1 DM) [
14]. Contrary to our results, Zrcková et al. [
47] reported that the TP ranged from 618 mg kg
−1 DM (common wheat cv. Annie) to 793 mg kg
−1 DM (T. monococcum GEO) and TPAs from 701 mg kg
−1 DM (cv. Annie) to 875 mg kg
−1 DM (Schwedisches einkorn), averaged over a two-year period, with the results in the following order: einkorn > emmer > common wheat > spelt. Pehlivan Karakas et al. [
48] demonstrated that einkorn exhibits a higher TP and total flavonoid content, as well as enhanced antioxidant characteristics, in comparison to modern wheat species, including common bread wheat and durum wheat.
3.2. Total, Free, and Bound Phenolic Acids (TPAs, FPAs, and BPAs)
PAs represent the predominant class of PCs in cereal grains. The sum of the FPA and BPA forms of these compounds represents the TPAs. Analysis of variance showed that there were significant differences between all tested cultivars of einkorn, emmer, and common wheat in the concentrations of TPAs, FPAs, and BPAs. Contrary to the results for TP, emmer GT-1669 had the highest content, followed by wheat control Mv Káplár (in 2019) and Mv Uncia (in 2020) in the Martonvásár samples’ two-year mean data (
Figure 4).
The concentrations of TPAs for einkorn were slightly below the range of most emmer cultivars, based on the results of the two-year research period. The results from the Želiezovce on-farm site showed that the TPA concentrations of einkorn Mv Alkor and emmer varieties ranged between 117 and 228 µg g
−1 DM (
Figure 5).
The lowest FPA and BPA contents under conventional conditions were observed in the Mv Esztena einkorn cultivar. The highest FPA concentration was observed in the GT-1669 emmer cultivar, followed by the control wheat Mv Káplár. Similarly, emmer landrace samples under organic conditions had higher TPA, FPA, and BPA values than einkorn cultivars.
In Martonvásár, the average share of FPAs in TPAs was 7.2% in einkorn, 7.5% in emmer, and 7.5% in control bread wheat. The proportion of BPAs in the total concentration of PAs was high and represented 92.5% in control wheat and emmer and 92.7% in einkorn on average. In Želiezovce, the average FPA content was 7.9% for einkorn and 8.6% for emmer (the highest level was measured in GT-1400). The share of BPA in the TPA concentration was high, averaging 92.6% in einkorn and emmer.
In general, the year and cultivar variables showed similar effects on PA content as on PCs (
Figure 4 and
Figure 5). However, the effect of years slightly differed in the case of emmer cultivars in Martonvásár. Three emmer cultivars (i.e., GT-143, GT-1669, Holland) showed different trends of PA development between the years than in the case of PCs.
Our research found a significant effect of cropping year on free, bound, and total PAs, with a higher level in 2019 than in 2020 in Martonvásár. In 2019, significantly higher TPA, FPA, and BPA values were observed than in 2020 in the conventionally grown einkorn landrace, Mv Alkor and two other emmer varieties, GT-1971, Mv Hegyes. Also, for the samples from the Želiezovce site, the year 2019 resulted in significantly higher free, bound, and total PAs than 2020.
Research examining the PA contents of ancient wheats in recent years has led to ambiguous results. According to Li et al. [
35], the mean concentration of TPAs was highest in emmer, followed by einkorn, with the lowest levels observed in spelt. In contrast, a study by Brandolini [
27] reported the highest TPA concentrations in spelt, moderately lower levels in einkorn, and the lowest concentrations in emmer. Einkorn and emmer exhibited approximately two-fold higher concentrations of BPAs compared to those of soft wheat, durum wheat, and spelt; among the BPA fractions, p-coumaric acid constituted roughly 50% of the total [
49]. According to Baranski et al. [
3] almost all free and bound PAs were significantly higher in einkorn than in emmer and spelt wheat. The significant interaction between varieties and growing years showed different reactions of the varieties to changing meteorological conditions. Other researchers reported similar results [
45,
50], where bound forms of PAs represented the major share of all PAs, while free PAs were detected as only up to 10% of the total PAs. According to Shewry and Hey [
15], ancient wheat species have phenolic components similar to bread wheat, including total ferulic acid. GT-1669 showed the highest free, bound, and total PA contents among the examined emmer landraces. Consistent with our findings, emmer exhibited the highest concentration of TPAs among the wheat genotypes [
35,
45,
47]. In our study, the emmer cultivar GT-1669 showed total phenolic acid (TPA) concentrations in the highest range among the lines tested. This emmer cultivar, commonly known by its original name, ‘Schwarzer Eschikon’, is a blackish-flaked spelt landscape variety. Its characteristically higher TP content and TPA, BPA, and FPA contents can be explained by its genetically determined high content of TP compounds containing coloring agents that give the straw a dark purple-blackish color. It is established that darker cereal phenotypes are frequently associated with higher TP contents, likely due to the greater synthesis and accumulation of these bioactive compounds [
14,
45,
51]. On the basis of contemporary scientific knowledge and dietary context, the observed elevation in TPA in GT-1669 is nutritionally meaningful: regular consumption of products made from this emmer can substantially boost PA and thus dietary antioxidant intake compared to typical cereal-based foods.
The effect of growing years on PA concentration has scarcely been investigated in the literature. According to Fernandez-Orozco et al. [
52], the growth year in Hungary had a dominant impact, especially on the free and conjugated PA contents in wheat varieties. Research by Lacko-Bartošová et al. [
45] demonstrated that the effect of growing year was more evident in the concentration of FPAs compared to bound ones. Warmer weather without precipitation deficiency during the ripening period was related to the increase in PAs concentrations. The extremely dry and hot weather during the maturity stages of wheat species had a negative impact on free and bound PAs [
45]. Furthermore, in a three-year study, Stracke et al. [
53] found that the effect of crop year was the most important factor influencing PA content. Another study [
27] showed that minimal precipitation during wheat’s heading and ripening phases correlates with higher TP. Shewry and Hey [
15] mentioned a significant relationship between the concentration of bioactive compounds and environmental parameters (e.g., precipitation and temperature) because climate, farming techniques, and underlying genes all influence plant metabolic pathways.
3.3. Individual Phenolic Acids
An interesting aspect of our research is that the individual PA concentrations of the total, free, and bound fractions were analyzed. Even though the total individual PA concentrations differed between the cultivars (
Table 4 and
Table 5), their percent share showed a similar trend. Ferulic acid accounted for 77.2–78.9% of the total individual PAs measured, followed by p-coumaric (6.1–7.0%), sinapic acid (4.8–5.3%), salicylic acid (3.0–3.5%), p-HBA (2.5–2.7%), caffeic acid (2.2–2.5%), and syringic acid (2.1–2.4%). The predominance of ferulic acid has also been reported in other scientific publications [
26,
33,
54].
The bound form of the seven PAs was always higher than their free form. The share of seven PAs in their bound form was similar to the total share; however, their free form showed a different trend. The free form of ferulic acid accounted for 57.3–59.2%, followed by p-coumaric (14.3–16%), syringic acid (9.9–11.1%), sinapic acid (6.2–7.1%), p-HBA (4.4–5.1%), salicylic acid (3.0–3.7%), and caffeic acid (1.5–2.1%).
Baranski et al. [
3] reported that ferulic acid was dominant among all PCs in wheat, representing over 72% of free PAs and over 95% of bound ones. Lacko-Bartošová et al. [
45] reported higher free PA concentrations in emmer than in wheat. Ferulic acid was the predominant free phenolic acid (66.3%) detected across the wheat genotypes, followed by syringic acid (11.7%), sinapic acid (7.4%), p-hydroxybenzoic acid (5.3%), salicylic acid (3.8%), p-coumaric acid (3.6%), and caffeic acid (2.1%). In contrast, Li et al. [
35] found a lower rate of FPAs in emmer than in bread wheat. It has been pointed out that there are a lack of data on the presence of FPAs in ancient wheat, but it is also recommended that further studies are carried out with various ancient and modern wheat species and varieties [
15]. At the Želiezovce organic site, a similar trend was observed, with ferulic acid being the most dominant aggregate in the measured samples (
Table 5).
The growing year significantly influenced the concentrations of all individual FPAs in Martonvásár and in Želiezovce, as well. Significantly higher concentrations of all PAs were reported in 2019 than in 2020. The spring period of the 2019 growing year (especially May) was colder, but June and July were warmer than usual, with a seasonal mean temperature of 22.3 °C, which was 2.1 °C higher than the 1981–2010 average, making it the second warmest summer since 1901. The rainfall was about 11% less than the long-term average. Following an unusually cool May, June 2020 experienced a positive temperature anomaly of approximately +0.6 °C relative to the long-term average, while July temperatures returned to near-normal seasonal values.
Figure A2 in
Appendix A represents the precipitation data for each year. The maturation period of the 2019 growing season was characterized by the most favorable agroclimatic conditions for the biosynthesis and accumulation of PAs. A significant interaction between cultivars and growing years in both sites was observed in all PAs at
p < 0.001. The 2019 growing season resulted in the highest concentrations of all individual PAs across all wheat cultivars, indicating a strong environmental influence on phenolic acid biosynthesis.
According to research by Lacko-Bartošová et al. [
45], the caffeic acid content of bread wheat was one of the lowest (2.14 µg g
−1 DM), and significant differences were found among other cultivars and breeding lines. Meanwhile, Barański et al. [
3] reported that the amount of caffeic acid did not differ among ancient wheat species such as spelt, einkorn, and emmer.
Several studies investigated the influence of environmental factors (air temperature, rainfall) on the levels of TPs and PAs in ancient wheat, but the results were inconsistent. High temperature was negatively correlated with TPs [
45], while Alexieva et al. [
55] re-ported an increased level of soluble PCs in wheat exposed to UV-B stress and drought. Baranski et al. [
3] found a more pronounced influence of year of cultivation on the amount of FPAs (except syringic acid) in ancient wheat species compared to BPAs, for which the year effect was found to be important for p-HBA, salicylic, p-coumaric, and syringic acids. No statistically significant differences were observed among wheat species in the concentration of bound caffeic acid. Climate, meteorological conditions, farming systems, agronomic practices such as crop rotation and tillage, and also genotype may affect plant metabolic pathways; moreover, secondary metabolite concentration depends on crop species [
46]. Due to the absence of a comprehensive literature review or meta-analysis on this topic, definitive conclusions cannot yet be drawn.
3.4. Effects of Cultivars, Site, and Year on Phenolic Compounds and Phenolic Acid Contents
For a more in-depth understanding of the effects of cultivar and year on PCs and PAs, data from two growing years and cultivars from Martonvásár and Želiezovce were analyzed separately. Analysis of variance Type I showed that the %F (free % in total), %B (bound % in total), and TPs were significantly affected by all tested cultivars and accessions of einkorn, emmer, and common wheat (
Table 6).
Statistical analyses also revealed a significant effect of the growing year (Y) on most parameters tested at the site Želiezovce. Meanwhile, there were fewer parameters affected by the year at the site Martonvásár. In all parameters tested at both sites, the interaction between cultivars and year (C × Y, i.e., G × E) always showed medium to high significance.
ANOVA results showed a consistent effect of cultivar and interaction between year and cultivars in all parameters measured (TP, PA, individual PA) at both sites. Overall, the year effect was consistent for the total PCs, PAs, and individual acids. However, the year effect was not consistent for the free and bound forms of phenolics. Here, the consistent significant effect of interaction between year and cultivars implies that some cultivars showed different results (relative to the other trial entries) in the two years.
3.5. Trends in the Phenolic Compound and Phenolic Acid Contents of All Species at All Sites
Nineteen wheat cultivars grown in 2019 and 2020 at different sites showed a wide range of PC and PA contents (
Figure 6 and
Figure 7). The results of samples from other on-farm locations (where only one year of data were available) were not relevant for drawing conclusions but were suitable for observing trends. The PC and PA values followed the same trend, where their bound form (PC: 82.5–89.0%, PA: 91.9–93.6%) was consistently higher than their free form (PC: 11.0–17.5%, PA: 6.4–8.1%).
In both PC and PA, the highest value was shown by emmer GT-831 grown in Füzesgyarmat (PC: 1254.0 ± 108.9 µg FAE g
−1 DM, PA: 748.1 ± 0.02 µg g
−1 DM), and the lowest value was shown by einkorn Mv Esztena (PC: 117 ± 2.0 µg FAE g
−1 DM, PA: 66.9 ± 3.5 µg g
−1 DM). The PC and PA values of emmer GT-831 (as well as others) differed in each site and year, showing the site and year effect. The three sites, i.e., Bugac (2019), Füzesgyarmat (2019), and Martonvásár (2019, 2020), showed higher PC and PA contents than the others (
Figure 6 and
Figure 7). Meanwhile, wheat cultivars grown in 2020 showed lower PC and PA contents than in 2019, as demonstrated by the sites Martonvásár, Pásztó, and Želiezovce.
Similar to the PC and PA results, for all of the individual phenolic acids measured, the proportion of bound forms was higher than that of the free ones (62.4–94.9% vs. 5.1–37.6%). The bound-to-free-PA ratio was the highest in ferulic and caffeic acid (multiple wheat varieties). On the contrary, the lowest bound-to-free-PA ratio was shown by syringic acid (einkorn variety GT-2139 and emmer variety Roter). The overall mean bound-to-free ratio of each PA, starting from the highest to the lowest, was ferulic acid < caffeic acid < salicylic acid < sinapic acid < p-hydroxybenzoic acid < p-coumaric acid < syringic acid. It seems that the TPA content is positively correlated with the bound-to-free ratio of PAs, meaning that high PA content is connected to the production of more bound than free PAs.
3.6. Effects of Cultivar, Site, and Year on Phenolic Compound and Phenolic Acid Content
The analysis of variance Type III showed that the concentrations of PCs, TPAs, and individual PAs were affected by the cultivar and moderately to highly affected by the site (
Table 7).
The only response variable not affected by the site was the percent bound (%B) and percent free (%F) ferulic acid content. Meanwhile, the year only slightly affected the sinapic acid %B and %F and had a high impact on all forms of the TPs. The consistently strong effect of cultivar, site, and year on all forms of TPs may be caused by the high variance between each cultivar grown at different sites and years. On the other hand, even though the TPs may differ across cultivars/site/year, the proportion of their free and bound forms showed less variance but was still affected by cultivar and site.
Note that not all wheat cultivars were present at all sites during both years of observation. Therefore, the mean PCs are visualized in
Figure 8 to showcase the site effect.
A more pronounced effect of sites was observed when the mean PC content and individual PA contents of certain cultivars were plotted at different sites (
Figure 8); for PAs, samples from the same sites also showed similar patterns. In general, sites showing higher contents of PCs and PAs were Bugac, Martonvásár, Füzesgyarmat, and Želiezovce. Uniquely, these sites have differing soil characteristics and farming methods.