The Association of G Protein-Coupled Estrogen Receptor (GPER) Polymorphisms with Ionizing Radiation Exposure in Healthcare Workers
Abstract
1. Introduction
2. Patients and Methods
2.1. Study Population
2.2. DNA Isolation from Whole-Blood Samples
2.3. PCR Amplification and Purification
2.4. DNA Sequencing Reaction and Purification
2.5. Capillary Electrophoresis
2.6. In Silico Functional and Clinical Annotation of Rs11544331
2.7. Statistical Analysis
3. Results
3.1. Clinical Characteristics
3.2. Rs3808350 Genotype and Allele Distributions
3.3. Rs3808351 Genotype and Allele Distributions
3.4. Rs11544331 Genotype and Allele Distributions
3.5. Genotype and Allele Distributions
3.6. In Silico Functional and Clinical Annotation of Rs11544331
4. Discussion
5. Conclusions
6. Limitations
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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| Primer | Forward and Reverse Sequence | Synthesizing Firm | Amplicon Size (bp) |
|---|---|---|---|
| rs3808350 | F: CCAGATGCCCCGATCCGCTGACTCT R: CCTCGGGACCTGCTGGGGCTCA | Oligomer | 154 |
| rs3808351 | F: GGGGGAGCCCACGCAGGTCTCTG R: CCTCCCGCGCTCGCTGCAGAA | Oligomer | 121 |
| rs11544331 | F: ACGCCCGCCGGACGAGCAC R: GGTCCGCCACCGCCAGGTTGA | Oligomer | 182 |
| PCR Step | Temp (°C) | Time | Cycle |
|---|---|---|---|
| Initial Denaturation | 95 | 5 min | 1 |
| Denature | 95 | 30 s | 30 |
| Anneal | 67 | 30 s | |
| Extension | 72 | 30 s | |
| Final Extension | 72 | 5 min | 1 |
| Cooling | 4 | - | 1 |
| PCR Step | Temp (°C) | Time | Cycle |
|---|---|---|---|
| Initial Denaturation | 95 | 1 min | 1 |
| Denature | 95 | 10 s | 30 |
| Anneal | 50 | 5 s | |
| Extension | 60 | 4 s | |
| Cooling | 4 | - | 1 |
| Variable | Case | Control | p Value |
|---|---|---|---|
| Sex (female/male), n | 18/32 | 12/24 | - |
| Age (years) | 39.83 ± 8.05 | 36.21 ± 7.31 | 0.06 |
| Mobile phone use (hours/day) | 13.3 ± 3.1 | 12.45 ± 1.6 | 0.10 |
| Computer use (hours/day) | 7.5 ± 4.3 | 6.4 ± 3.6 | 0.20 |
| BMI (kg/m2) | 25.31 ± 4.16 | 24.67 ± 4.56 | 0.51 |
| Urea (mg/dL) | 28.44 ± 5.4 | 30.41 ± 5.12 | 0.09 |
| Creatinine (mg/dL) | 0.84 ± 0.19 | 0.83 ± 0.20 | 0.82 |
| Triglycerides (mg/dL) | 208.4 ± 103.1 | 210.70 ± 106.4 | 0.92 |
| Total cholesterol (mg/dL) | 155.1 ± 39.4 | 152.7 ± 42.9 | 0.79 |
| HDL cholesterol (mg/dL) | 36.1 ± 10.1 | 38.5 ± 9.6 | 0.27 |
| LDL cholesterol (mg/dL) | 79.9 ± 28.5 | 75.8 ± 30.2 | 0.53 |
| Model/Genotype | Case n (%) | Control n (%) | χ2 p Value | OR (95% CI) | p Value |
|---|---|---|---|---|---|
| AA | 19 (38) | 8 (22.22) | 0.3068 | – | – |
| AG | 26 (52) | 24 (66.66) | |||
| GG | 5 (10) | 4 (11.11) | |||
| Dominant (AG + GG vs. AA) | 31 (62) vs. 19 (38) | 28 (77.78) vs. 8 (22.22) | – | ref. 0.4662 (0.1736–1.167) | 0.1357 |
| Allelic (G vs. A) | 36 (36) vs. 64 (64) | 32 (44.44) vs. 40 (55.56) | – | ref. 0.7031 (0.3852–1.280) | 0.3330 |
| Model/Genotype | Case n (%) | Control n (%) | χ2 p Value | OR (95% CI) | p Value |
|---|---|---|---|---|---|
| GG | 25 (50) | 16 (44.44) | 0.8531 | – | – |
| GA | 21 (42) | 16 (44.44) | |||
| AA | 4 (8) | 4 (11.11) | |||
| Dominant (GA + AA vs. GG) | 25 (50) vs. 25 (50) | 20 (55.56) vs. 16 (44.44) | – | ref. 0.8000 (0.3285–1.893) | 0.6319 |
| Allelic (A vs. G) | 29 (29) vs. 71 (71) | 24 (33.33) vs. 48 (66.67) | – | ref. 0.8169 (0.4196–1.550) | 0.6026 |
| Model/Genotype | Case n (%) | Control n (%) | χ2 p Value | OR (95% CI) | p Value |
|---|---|---|---|---|---|
| CC | 27 (54) | 28 (77.78) | 0.0367 | – | – |
| CT | 19 (38) | 8 (22.22) | |||
| TT | 4 (8) | 0 (0) | |||
| Dominant (CT + TT vs. CC) | 23 (46) vs. 27 (54) | 8 (22.22) vs. 28 (77.78) | – | ref. 2.981 (1.106–7.904) | 0.0241 |
| Allelic (T vs. C) | 27 (27) vs. 73 (73) | 8 (11.11) vs. 64 (88.89) | – | ref. 2.959 (1.282–6.606) | 0.0110 |
| SNP | Observed Genotypes | Expected Genotypes | p (χ2) | p (Exact) |
|---|---|---|---|---|
| rs3808350 | AA = 8, AG = 24, GG = 4 | AA = 13.44, AG = 17.11, GG = 5.44 | 0.0685 | 0.0942 |
| rs3808351 | GG = 16, GA = 16, AA = 4 | GG = 16, GA = 16, AA = 4 | >0.9999 | 1.0000 |
| rs11544331 | CC = 28, CT = 8, TT = 0 | CC = 28.44, CT = 7.11, TT = 0.44 | 0.7549 | 0.7526 |
| Parameter | Result |
|---|---|
| SNP ID | rs11544331 |
| Gene | GPER1 |
| Gene ID | ENSG00000164850 |
| Protein | G protein-coupled estrogen receptor 1 |
| UniProt entry | GPER1_HUMAN |
| UniProt accession | Q99527 |
| Transcript | ENST00000397088/NM_001098201.3 |
| ClinVar variant name | NM_001098201.3(GPER1):c.47C>T (p.Pro16Leu) |
| ClinVar Variation ID | 1248609 |
| ClinVar accession | VCV001248609.2 |
| Cytogenetic band | 7p22.3 |
| Genomic location | NC_000007.14:g.1091775C>T; GRCh38: 7:1091775 |
| Variant type | Single-nucleotide variant |
| Molecular consequence | Missense/non-synonymous variant |
| Codon change | CCA>CTA |
| Protein position | 16 |
| Amino acid substitution | p.Pro16Leu/P16L |
| VEP impact | Moderate |
| SIFT | 0.19; Tolerated |
| PolyPhen-2 | 0.000; Benign |
| AlphaMissense | 0.0743; Likely benign |
| CADD raw score | 0.113797 |
| CADD PHRED score | 1.654 |
| Grantham score | 98 |
| SpliceAI scores | 0.000 for acceptor gain, acceptor loss, donor gain, and donor loss |
| ClinVar germline classification | Benign |
| ClinVar review status | Single submitter, criteria provided |
| ClinVar condition | Not provided |
| Global MAF | 0.1389, T allele |
| gnomAD exomes AF | Approximately 0.207–0.228 |
| Somatic clinical impact | No data submitted |
| Oncogenicity | No data submitted |
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Share and Cite
Öztürk, Ü.; Kurutaş, E.B.; Üremiş, N.; Üremiş, M.M.; Özkömeç, F.N. The Association of G Protein-Coupled Estrogen Receptor (GPER) Polymorphisms with Ionizing Radiation Exposure in Healthcare Workers. J. Clin. Med. 2026, 15, 4821. https://doi.org/10.3390/jcm15124821
Öztürk Ü, Kurutaş EB, Üremiş N, Üremiş MM, Özkömeç FN. The Association of G Protein-Coupled Estrogen Receptor (GPER) Polymorphisms with Ionizing Radiation Exposure in Healthcare Workers. Journal of Clinical Medicine. 2026; 15(12):4821. https://doi.org/10.3390/jcm15124821
Chicago/Turabian StyleÖztürk, Ünal, Ergül Belge Kurutaş, Nuray Üremiş, Muhammed Mehdi Üremiş, and Fatma Nur Özkömeç. 2026. "The Association of G Protein-Coupled Estrogen Receptor (GPER) Polymorphisms with Ionizing Radiation Exposure in Healthcare Workers" Journal of Clinical Medicine 15, no. 12: 4821. https://doi.org/10.3390/jcm15124821
APA StyleÖztürk, Ü., Kurutaş, E. B., Üremiş, N., Üremiş, M. M., & Özkömeç, F. N. (2026). The Association of G Protein-Coupled Estrogen Receptor (GPER) Polymorphisms with Ionizing Radiation Exposure in Healthcare Workers. Journal of Clinical Medicine, 15(12), 4821. https://doi.org/10.3390/jcm15124821

