Trichinella spp. in Wild Boars (Sus scrofa), Brown Bears (Ursus arctos), Eurasian Lynxes (Lynx lynx) and Badgers (Meles meles) in Estonia, 2007–2014
Abstract
:Simple Summary
Abstract
1. Introduction
2. Materials and Methods
2.1. Ethics
2.2. Setting
2.3. Samples and Data
2.4. Artificial Digestion
2.5. Molecular Analysis
2.6. Statistical Analyses
3. Results
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Variable | N Tested a | n pos a (n pos a, b) | Prevalence (95% CI) a | Odds Ratio (95% CI) a | p-Value a | Median lpg a,b | Mean lpg a,b | Range lpg a,b | Trichinella Species Identified (n Animals) a,b |
---|---|---|---|---|---|---|---|---|---|
Wild boars | |||||||||
Sex | |||||||||
Male | 2631 | 65 (66) | 2.5 (1.9–3.1) | reference | − | 1.43 | 11.89 | 0.02–101.08 | Tb (52), Tn (6), Tp (1), Tb+Tn (2), Tb+Ts (1), Tspp (4) |
Female | 1386 | 45 (47) | 3.2 (2.4–4.3) | 1.3 (0.9–1.9) | 0.157 | 0.58 | 10.59 | 0.02–100.00 | Tb (40), Tn (2), Tb+Ts (1), Tspp (4) |
Unknown | 26,549 | 171 (183) | 0.6 (0.6–0.7) | 2.12 c | 16.30 c | 0.01–654.50 c | Tb (123), Tn (7), Ts (5), Tp (5), Tb+Tn (3), Tb+Ts (1), Tspp (39) | ||
Age category | |||||||||
Juvenile | 3992 | 67 (68) | 1.7 (1.3–2.1) | reference | − | 0.82 | 12.56 | 0.02–100.00 | Tb (54), Tn (5), Tb+Ts (1), Tspp (8) |
Adult | 2057 | 60 (62) | 2.9 (2.3–3.7) | 1.7 (1.2–2.4) | 0.003 ** | 1.57 | 9.87 | 0.02–101.08 | Tb (53), Tn (2), Tb+Tn (2), Tb+Ts (1), Tspp (4) |
Unknown | 24,517 | 154 (166) | 0.6 (0.5–0.7) | 2.18 c | 16.86 c | 0.01–654.50 c | Tb (108), Tn (8), Ts (5), Tp (6), Tb+Tn (3), Tb+Ts (1), Tspp (35) | ||
Region | |||||||||
Eastern counties | 8449 | 76 (79) | 0.9 (0.7–1.1) | reference | − | 0.83 | 11.17 | 0.02–230.88 | Tb (47), Tn (10), Ts (1), Tb+Tn (2), Tspp (19) |
Western counties | 10,054 | 196 (208) | 1.95 (1.7–2.2) | 2.2 (1.7–2.9) | <0.001 *** | 2.44 | 15.99 | 0.01–654.50 | Tb (162), Tn (5), Tp (6), Ts (4) Tb+Tn (3), Tb+Ts (3), Tspp (25) |
Southern counties | 8204 | 103 (115) | 1.3 (1.0–1.5) | reference | − | 2.58 | 12.95 | 0.01–190.00 | Tb (75), Tn (7), Tp (6), Ts (3), Tb+Tn (4), Tspp (20) |
Northern counties | 10,299 | 169 (172) | 1.6 (1.4–1.9) | 1.3 (1.0–1.7) | 0.026 * | 1.43 | 15.89 | 0.02–654.50 | Tb (134), Tn (8), Ts (2), Tb+Tn (1), Tb+Ts (3), Tspp (24) |
Unknown | 12,063 | 9 (9) | 0.1 (0.04–0.1) | 1.73 c | 3.25 c | 0.06–12.54 c | Tb (6), Tspp (3) | ||
Year | |||||||||
2007 | 2422 | 10 (12) | 0.4 (0.2–0.7) | reference | − | 2.55 | 26.15 | 0.10–100.00 | Tb (4), Tspp (8) |
2008 | 2758 | 10 (13) | 0.4 (0.2–0.6) | 0.9 (0.4–2.2) | 0.774 | 6.00 c | 13.01 c | 0.42–58.00 c | Tb (3), Tspp (10) |
2009 | 4380 | 30 (37) | 0.7 (0.5–1.0) | 1.7 (0.8–3.6) | 0.160 | 2.40 | 8.92 | 0.01–52.15 | Tb (20), Tp (2), Ts (5), Tb+Ts (1), Tspp (9) |
2010 | 3598 | 26 (27) | 0.7 (0.5–1.0) | 1.8 (0.9–3.8) | 0.127 | 2.68 | 13.72 | 0.02–100.00 | Tb (22), Tn (1), Tb+Tn (1), Tspp (3) |
2011 | 2713 | 33 (35) | 1.2 (0.9–1.7) | 3.0 (1.5–6.3) | 0.001 *** | 3.44 | 17.88 | 0.02–230.88 | Tb (25), Tn (3), Tb+Tn (2), Tspp (5) |
2012 | 3986 | 26 (26) | 0.7 (0.4–0.9) | 1.6 (0.8–3.4) | 0.217 | 0.89 | 31.40 | 0.02–654.50 | Tb (20), Tn (1), Tp (2), Tspp (3) |
2013 | 4715 | 77 (77) | 1.6 (1.3–2.0) | 4.0 (2.1–8.2) | <0.001 *** | 1.60 | 9.07 | 0.02–60.00 | Tb (66), Tn (4), Tp (1), Tb+Tn (2), Tspp (4) |
2014 | 5994 | 69 (69) | 1.2 (0.9–1.4) | 2.8 (1.5–5.8) | <0.001 *** | 0.82 | 13.59 | 0.02–191.36 | Tb (55), Tn (6), Tp (1), Tb+Ts (2), Tspp (5) |
Wild boars total | 30,566 | 281 (296) | 0.9 (0.8–1.0) | 1.64 c | 14.40 c | 0.01–654.50 c | Tb (215), Tn (15), Tp (6), Ts (5), Tb+Tn (5), Tb+Ts (3), Tspp (47) | ||
Brown bears | |||||||||
Sex | |||||||||
Male | 26 | 13 (13) | 50.0 (31.3–68.7) | reference | - | 0.20 | 1.17 | 0.02–10.96 | Tb (7), Tn (1), Tspp (5) |
Female | 14 | 9 (9) | 64.3 (37.6–85.6) | 1.8 (0.5–7.3) | 0.413 | 3.48 | 4.81 | 0.02–11.02 | Tb (4), Tn (4), Tb+Tn (1) |
Unknown | 389 | 41 (42) | 10.5 (7.8–13.9) | 0.54 | 4.78 | 0.02–81.96 | Tb (18), Tn (17), Tb+Tn (2), Tspp (5) | ||
Age category | |||||||||
Juvenile | 22 | 2 (2) | 9.1 (1.55–26.9) | reference | - | 4.53 | 4.53 | 0.70–8.36 | Tb (1), Tn (1) |
Adult | 87 | 19 (19) | 21.8 (14.1–31.4) | 2.8 (0.7–19.0) | 0.185 | 0.86 | 3.00 | 0.02–11.02 | Tb (10), Tn (5), Tb+Tn (2), Tspp (2) |
Unknown | 320 | 42 (43) | 13.1 (9.75–17.2) | 0.24 | 4.50 | 0.02–81.96 | Tb (18), Tn (16), Tb+Tn (1), Tspp (8) | ||
Region | |||||||||
Eastern counties | 304 | 48 (48) | 15.8 (12.0–20.2) | reference | − | 0.42 | 4.78 | 0.03–81.96 | Tb (20), Tn (18), Tspp (10) |
Western counties | 72 | 12 (13) | 16.7 (9.4–26.6) | 1.1 (0.5–2.1) | 0.839 | 0.13 | 2.06 | 0.02–10.76 | Tb (7), Tn (3), Tb+Tn (3) |
Southern counties | 141 | 16 (17) | 11.35 (6.9–17.4) | reference | − | 0.14 | 6.27 | 0.02–81.96 | Tb (10), Tn (4), Tb+Tn (1), Tspp (2) |
Northern counties | 235 | 44 (44) | 18.7 (14.1–24.1) | 1.8 (1.0–3.4) | 0.058 | 0.77 | 3.40 | 0.02–29.96 | Tb (17), Tn (17), Tb+Tn (2), Tspp (2) |
Unknown | 53 | 3 (3) | 5.7 (1.5–14.6) | 0.76 | 1.11 | 0.20–2.36 | Tb (2), Tn (1) | ||
Year | |||||||||
2007 | 46 | 8 (8) | 17.4 (8.4–30.4) | reference | − | 0.35 | 0.95 | 0.03–4.10 | Tb (2), Tn (1), Tspp (5) |
2008 | 50 | 5 (5) | 10.0 (3.8–20.8) | 0.5 (0.1–1.8) | 0.311 | 0.60 | 1.01 | 0.06–2.03 | Tb (3), Tspp (2) |
2009 | 51 | 7 (8) | 13.7 (6.2–25.3) | 0.8 (0.2–2.3) | 0.631 | 0.44 | 4.71 | 0.06–15.90 | Tb (3), Tn (3), Tspp (2) |
2010 | 64 | 9 (9) | 14.1 (7.1–24.2) | 0.8 (0.3–2.3) | 0.641 | 0.20 | 1.53 | 0.02–9.48 | Tb (7), Tn (2) |
2011 | 64 | 8 (8) | 12.5 (6.0–22.4) | 0.7 (0.2–2.0) | 0.487 | 3.44 | 5.53 | 0.04–16.34 | Tb (5), Tn (3) |
2012 | 74 | 8 (8) | 12.2 (6.1–21.1) | 0.6 (0.2–1.7) | 0.320 | 0.85 | 4.61 | 0.02–28.96 | Tb (1), Tn (5), Tb+Tn (2) |
2013 | 42 | 15 (15) | 35.7 (22.4–51.0) | 2.6 (1.0–7.4) | 0.057 | 0.19 | 2.43 | 0.06–11.02 | Tb (7), Tn (6), Tb+Tn (1), Tspp (1) |
2014 | 38 | 3 (3) | 7.9 (2.1–20.0) | 0.4 (0.1–1.6) | 0.220 | 0.10 | 27.39 | 0.10–81.96 | Tb (1), Tn (2) |
Brown bears total | 429 | 63 (64) | 14.7 (11.6–18.3) | 0.44 | 4.11 | 0.02–81.96 | Tb (29), Tn (22), Tb+Tn (3), Tspp (10) | ||
Lynxes | |||||||||
Sex | |||||||||
Male | 14 | 14 (14) | 100.0 (80.7–100.0) | reference | − | 2.38 | 6.51 | 0.20–28.00 | Tb (9), Tn (1), Tb+Tn (4) |
Female | 10 | 8 (8) | 80.0 (48.1–96.5) | − | 0.163 | 0.90 | 4.14 | 0.38–20.10 | Tb (3), Tn (2), Ts (1), Tb+Tn (1), Tspp (1) |
Unknown | 66 | 37 (41) | 56.1 (44.0–67.7) | 1.20 c | 3.53 c | 0.02–21.40 c | Tb (15), Tn (1), Ts (3), Tb+Tn (10), Tb+Ts (1), Tspp (12) | ||
Age category | |||||||||
Juvenile | 15 | 7 (7) | 46.7 (23.2–71.3) | reference | − | 14.88 | 10.97 | 0.20–28.00 | Tb (3), Ts (1), Tb+Tn (3) |
Adult | 17 | 14 (14) | 82.4 (59.1–95.3) | 5.0 (1.0–30.2) | 0.045 * | 1.91 | 2.78 | 0.04–9.22 | Tb (6), Tn (2), Ts (1), Tb+Tn (4), Tspp (1) |
Unknown | 58 | 38 (42) | 65.5 (52.7–76.9) | 0.99 c | 3.65 c | 0.02–21.40 c | Tb (18), Tn (2), Ts (2), Tb+Tn (8), Tb+Ts (1), Tspp (1) | ||
Region | |||||||||
Eastern counties | 60 | 36 (38) | 60.0 (47.3–71.8) | reference | − | 1.19 c | 2.76 c | 0.02–21.40 c | Tb (16), Tn (1), Ts (1), Tb+Tn (8), Tb+Ts (1), Tspp (11) |
Western counties | 27 | 23 (25) | 85.2 (68.0–95.1) | 3.8 (1.2–14.2) | 0.020 * | 2.34 | 6.49 | 0.1–28.00 | Tb (11), Tn (3), Ts (3), Tb+Tn (7), Tspp (1) |
Southern counties | 33 | 18 (21) | 54.5 (37.5–70.8) | reference | − | 2.42 | 3.66 | 0.02–14.60 | Tb (9), Tn (1), Ts (2), Tb+Tn (9) |
Northern counties | 54 | 41 (42) | 75.9 (63.2–85.9) | 2.6 (1.0–6.7) | 0.045 * | 1.14 c | 4.62 c | 0.16–28.00 c | Tb (18), Tn (3), Ts (2), Tb+Tn (6), Tb+Ts (1), Tspp (12) |
Unknown | 3 | 0 (0) | 0.0 (0.0–63.2) | − | − | − | − | ||
Year | |||||||||
2007 | 10 | 5 (6) | 50.0 (21.2–78.8) | reference | − | 1.45 c | 6.25 c | 0.70–21.40 c | Tb+Tn (1), Tspp (5) |
2008 | 12 | 5 (5) | 41.7 (17.2–69.8) | 0.7 (0.1–4.2) | 0.721 | 0.90 | 2.18 | 0.50–7.60 | Tb (3), Tspp (2) |
2009 | 20 | 14 (16) | 70.0 (47.7–86.8) | 2.3 (0.5–11.8) | 0.321 | 0.50 | 2.08 | 0.10–14.88 | Tb (5), Ts (4), Tb+Tn (3), Tb+Ts (1), Tspp (3) |
2010 | 17 | 11 (12) | 64.7 (40.5–84.3) | 1.8 (0.35–9.5) | 0.487 | 0.82 | 2.73 | 0.20–14.60 | Tb (9), Tn (1), Tb+Tn (2) |
2011 | 11 | 7 (7) | 63.6 (33.6–87.2) | 1.7 (0.3–10.9) | 0.567 | 2.48 | 2.48 | 0.02–4.82 | Tb (4), Tn (1), Tb+Tn (2) |
2012 | 11 | 10 (10) | 90.9 (62.7–99.6) | 8.9 (0.9–259.1) | 0.059 | 8.39 | 10.10 | 0.04–28.00 | Tb (4), Tn (1), Tb+Tn (3), Tspp (2) |
2013 | 9 | 7 (7) | 77.8 (43.8–96.1) | 3.3 (0.4–33.1) | 0.260 | 6.24 | 6.23 | 0.38–12.10 | Tb (2), Tn (1), Tb+Tn (4) |
Lynxes total | 90 | 59 (63) | 65.6 (55.3–74.8) | 1.42 c | 4.29 c | 0.02–28.00 c | Tb (27), Tn (4), Ts (4), Tb+Tn (15), Tb+Ts (1), Tspp (12) | ||
Badgers | |||||||||
Sex | |||||||||
Male | 1 | 1 | 100.0 (5.0–100.0) | − | − | 20.96 | 20.96 | 20.96 | Tb (1) |
Female | 1 | 0 | 0.0 (0.0–95.0) | − | − | − | − | − | − |
Unknown | 3 | 2 | 66.7 (13.2–98.3) | 7.09 | 7.09 | 2.90–11.28 | Tb (1), Tspp (1) | ||
Region | |||||||||
Eastern counties | 3 | 2 | 66.7 (13.2–98.3) | − | − | 10.09 | 10.09 | 10.09 | Tb (1), Tspp (1) |
Western counties | 2 | 1 | 50.0 (2.5–97.5) | − | − | 20.96 | 20.96 | 20.96 | Tb (1) |
Southern counties | 3 | 2 | 66.7 (13.2–98.3) | − | − | 11.93 | 11.93 | 11.93 | Tb (1), Tspp (1) |
Northern counties | 2 | 1 | 50.0 (2.5–97.5) | − | − | 11.28 | 11.28 | 11.28 | Tb (1) |
Year | |||||||||
2008 | 1 | 1 | 100.0 (5.0–100.0) | − | − | 2.90 | 2.90 | 2.90 | Tb (1) |
2013 | 2 | 2 | 100.0 (22.4–100.0) | − | − | 16.12 | 16.12 | 11.28–20.96 | Tb (1), Tspp (1) |
2014 | 2 | 0 | 0.0 (0.0–77.6) | − | − | − | − | − | − |
Badgers total | 5 | 3 (3) | 60.0 (18.2–92.7) | 11.28 | 11.71 | 2.90–20.96 | Tb (2), Tspp (1) |
Trichinella Species | Wild Boars (n = 30,566 a+15 b) | Brown Bears (n = 429 a +1 b) | Lynxes (n = 90 a +4 b) | Badgers (n = 5 a) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
n pos a (n pos a,b) | Prevalence % (95% CI) a | % (95% CI) of Trichinella Positive a,b | Median; Mean (Range) of lpg a,b | n pos a (n pos a,b) | Prevalence % (95% CI) a | % (95% CI) of Trichinella Positive a,b | Median; Mean (Range) of lpg a,b | n pos a (n pos a,b) | Prevalence % (95% CI) a | % (95% CI) of Trichinella Positive a,b | Median; Mean (Range) of lpg a,b | n posa (n pos a,b) | Prevalence % (95% CI) a | % (95% CI) of Trichinella Positive a,b | Median; Mean (Range) of lpg a,b | |
T. britovi only | 209 (215) | 0.7 (0.6–0.8) | 72.6 (67.3–77.5) | 2.06; 16.30 (0.02–654.5) | 28 (29) | 6.5 (4.5–9.2) | 45.3 (33.5–57.6) | 0.48; 5.88 (0.10–81.96) | 26 (27) | 28.9 (20.2–38.9) | 42.9 (31.1–55.3) | 1.48; 4.71 (0.06–28.00) | 2 (2) | 40.0 (7.4–81.8) | 66.7 (13.2–98.3) | 16.12; 16.12 (11.28–20.96) |
T. nativa only | 15 (15) | 0.05 (0.03–0.08) | 5.1 (3.0–8.0) | 0.82; 6.69 (0.04–54.32) | 22 (22) | 5.1 (3.3–7.5) | 34.4 (23.5–46.6) | 0.60; 3.40 (0.02–28.96) | 4 (4) | 4.4 (1.4–10.4) | 6.3 (2.1–14.6) | 3.53; 6.80 (0.02–20.10) | − | − | − | − |
T. pseudospiralis only | 6 (6) | 0.02 (0.01–0.04) | 2.0 (0.8–4.2) | 1.63; 5.52 (0.18–23.34) | − | − | − | − | − | − | − | − | − | − | − | − |
T. spiralis only | 5 (5) | 0.02 (0.01–0.04) | 1.7 (0.6–3.7) | 4.76; 4.51 (0.20–7.65) | − | − | − | − | 3 (4) | 3.3 (0.9–8.8) | 6.3 (2.1–14.6) | 3.61; 5.58 (0.23–14.88) | − | − | − | − |
T. britovi and T. nativa | 5 (5) | 0.02 (0.01–0.04) | 1.7 (0.6–3.7) | 1.38; 10.58 (0.04–45.20) | 3 (3) | 0.7 (0.2–1.9) | 4.7 (1.2–12.2) | 3.48; 2.41 (0.02–3.74) | 14 (15) | 15.6 (9.1–24.2) | 23.8 (14.5–35.5) | 2.00; 4.62 (0.04–17.40) | − | − | − | − |
T. britovi and T. spiralis | 3 (3) | 0.01 (0.00–0.03) | 1.0 (0.3–2.7) | 0.24; 2.67 (0.16–7.60) | − | − | − | − | 1 (1) | 1.1 (0.1–5.4) | 1.6 (0.1–7.6) | 0.20 | − | − | − | − |
T. britovi Total c | 217 (223) | 0.7 (0.6–0.8) | 75.3 (70.2–80.0) | 1.88; 15.99 (0.02–654.50) | 31 (32) | 7.2 (5.1–10.0) | 50.0 (37.9–51.4) | 0.54; 5.56 (0.02–81.96) | 41 (43) | 45.6 (35.5–55.9) | 68.3 (56.0–78.8) | 1.58; 4.23 (0.04–28.00) | 2 (2) | 40.0 (7.4–81.8) | 66.7 (13.2–98.3) | 16.12; 16.12 (11.28–20.96) |
T. nativa Total c | 20 (20) | 0.07 (0.04–0.10) | 6.8 (4.3–10.1) | 1.14; 7.66 (0.04–54.32) | 25 (25) | 5.8 (3.9–8.4) | 39.1 (27.7–51.4) | 0.76; 3.28 (0.02–28.96) | 18 (19) | 20.0 (12.7–29.2) | 30.2 (19.8–42.3) | 2.00; 5.08 (0.02–20.10) | − | − | − | |
T. pseudospiralis total c | 6 (6) | 0.02 (0.01–0.04) | 2.0 (0.8–4.2) | 3.70; 6.21 (0.18–23.34) | − | − | − | − | − | − | − | − | − | − | − | |
T. spiralis Total c | 8 (8) | 0.03 (0.01–0.05) | 2.7 (1.3–5.1) | 4.26; 3.82 (0.16–7.65) | − | − | − | − | 4 (5) | 4.4 (1.4–10.4) | 7.9 (3.0–16.7) | 3.60; 4.51 (0.20–14.88) | − | − | − | |
Species-level result total | 243 (249) | 0.8 (0.7–0.9) | 84.1 (79.6–88.0) | 1.76; 15.07 (0.02–654.50) | 53 (54) | 12.4 (9.5–15.7) | 84.4 (73.9–91.8) | 0.60; 4.76 (0.02–81.96) | 48 (51) | 53.3 (43.0–63.5) | 81.0 (69.9–89.3) | 1.64; 4.54 (0.02–28.00) | 2 (2) | 40.0 (7.4–81.8) | 66.7 (13.2–98.3) | 16.12; 16.12 (11.28–20.96) |
No species-level result | 38 (47) | 0.1 (0.1–0.2) | 15.9 (12.0–20.4) | 0.70; 10.55 (0.01–190.00) d | 10 (10) | 2.3 (1.2–4.1) | 15.6 (8.2–26.1) | 0.23; 0.68 (0.03–2.03) | 11 (12) | 12.2 (6.6–20.3) | 19.0 (10.8–30.1) | 0.65; 3.02 (0.16–21.40) d | 1 (1) | 20.0 (1.0–66.6) | 33.3 (1.7–86.8) | 2.9 |
Total | 281 (296) | 0.9 (0.8–1.0) | 100.0 | 1.64; 14.40 (0.01–654.50) d | 63 (64) | 14.7 (11.6–18.3) | 100.0 | 0.42; 4.05 (0.02–81.96) | 59 (63) | 65.6 (55.3–74.8) | 100.0 | 1.45; 4.46 (0.02–28.00) d | 3 (3) | 60.0 (18.2–92.7) | 100.0 | 11.28; 11.71 (290–20.96) |
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Kärssin, A.; Häkkinen, L.; Vilem, A.; Jokelainen, P.; Lassen, B. Trichinella spp. in Wild Boars (Sus scrofa), Brown Bears (Ursus arctos), Eurasian Lynxes (Lynx lynx) and Badgers (Meles meles) in Estonia, 2007–2014. Animals 2021, 11, 183. https://doi.org/10.3390/ani11010183
Kärssin A, Häkkinen L, Vilem A, Jokelainen P, Lassen B. Trichinella spp. in Wild Boars (Sus scrofa), Brown Bears (Ursus arctos), Eurasian Lynxes (Lynx lynx) and Badgers (Meles meles) in Estonia, 2007–2014. Animals. 2021; 11(1):183. https://doi.org/10.3390/ani11010183
Chicago/Turabian StyleKärssin, Age, Liidia Häkkinen, Annika Vilem, Pikka Jokelainen, and Brian Lassen. 2021. "Trichinella spp. in Wild Boars (Sus scrofa), Brown Bears (Ursus arctos), Eurasian Lynxes (Lynx lynx) and Badgers (Meles meles) in Estonia, 2007–2014" Animals 11, no. 1: 183. https://doi.org/10.3390/ani11010183