Incidence and Resistance Patterns of Citrobacter spp. in Switzerland: A Nationwide, Retrospective Surveillance Study (2010–2022)
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Design and Inclusion Criteria
2.2. Data Sources
2.3. Statistical Analysis
3. Results
3.1. Characteristics of Citrobacter spp. Species
3.2. Citrobacter spp. Bloodstream Infections (BSIs)
3.3. Citrobacter spp. from Urinary Tract Samples
3.4. Citrobacter spp. Antibiotic Susceptibility
4. Discussion
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
ANRESIS | Swiss National Centre for Antibiotic Resistance |
BSI | Bloodstream infection |
C. freundii | Citrobacter freundii |
CI | Confidence interval |
C. koseri | Citrobacter koseri |
ICU | Intensive care unit |
IRR | Incidence rate ratio |
References
- Arana, D.M.; Ortega, A.; González-Barberá, E.; Lara, N.; Bautista, V.; Gómez-Ruíz, D.; Sáez, D.; Fernández-Romero, S.; Aracil, B.; Pérez-Vázquez, M.; et al. Carbapenem-Resistant Citrobacter spp. Isolated in Spain from 2013 to 2015 Produced a Variety of Carbapenemases Including VIM-1, OXA-48, KPC-2, NDM-1 and VIM-2. J. Antimicrob. Chemother. 2017, 72, 3283–3287. [Google Scholar] [CrossRef] [PubMed]
- Fonton, P.; Hassoun-Kheir, N.; Harbarth, S. Epidemiology of Citrobacter spp. Infections among Hospitalized Patients: A Systematic Review and Meta-Analysis. BMC Infect. Dis. 2024, 24, 662. [Google Scholar]
- Yao, Y.; Falgenhauer, L.; Falgenhauer, J.; Hauri, A.M.; Heinmüller, P.; Domann, E.; Chakraborty, T.; Imirzalioglu, C. Carbapenem-Resistant Citrobacter spp. as an Emerging Concern in the Hospital-Setting: Results From a Genome-Based Regional Surveillance Study. Front. Cell. Infect. Microbiol. 2021, 11, 744431. [Google Scholar] [CrossRef] [PubMed]
- Räisänen, K.; Sarvikivi, E.; Arifulla, D.; Pietikäinen, R.; Forsblom-Helander, B.; Tarkka, E.; Anttila, V.-J.; Grönroos, J.O.; Rintala, E.; Kauranen, J.; et al. Three Clusters of Carbapenemase-Producing Citrobacter Freundii in Finland, 2016–2020. J. Antimicrob. Chemother. 2021, 76, 2697–2701. [Google Scholar] [CrossRef] [PubMed]
- Hu, Y.; Wang, Y.; Sun, Q.; Huang, Z.-X.; Wang, H.-Y.; Zhang, R.; Chen, G. Colistin Resistance Gene Mcr-1 in Gut Flora of Children. Int. J. Antimicrob. Agents 2017, 50, 593–597. [Google Scholar] [CrossRef] [PubMed]
- Swiss Centre for Antibiotic Resistance (ANRESIS). Available online: https://www.anresis.ch/ (accessed on 1 August 2024).
- Eucast. Clinical Breakpoints and Dosing of Antibiotics. Available online: https://www.eucast.org/clinical_breakpoints (accessed on 9 February 2025).
- CLSI Standards & Guidelines. Shop for CLSI Standards. Available online: https://clsi.org/standards/ (accessed on 9 February 2025).
- OFSP (Office Fédéral de la Santé Publique). Chiffres-Clés des Hôpitaux Suisses. Available online: https://www.bag.admin.ch/bag/fr/home/zahlen-und-statistiken/zahlen-fakten-zu-spitaelern/kennzahlen-der-schweizer-spitaeler.html (accessed on 2 August 2024).
- Gajdács, M.; Urbán, E. Resistance Trends and Epidemiology of Citrobacter-Enterobacter-Serratia in Urinary Tract Infections of Inpatients and Outpatients (RECESUTI): A 10-Year Survey. Medicina 2019, 55, 285. [Google Scholar] [CrossRef] [PubMed]
- Hrbacek, J.; Cermak, P.; Zachoval, R. Current Antibiotic Resistance Patterns of Rare Uropathogens: Survey from Central European Urology Department 2011–2019. BMC Urol. 2021, 21, 61. [Google Scholar]
- Barlow, M.; Hall, B.G. Origin and Evolution of the AmpC β-Lactamases of Citrobacter Freundii. Antimicrob. Agents Chemother. 2002, 46, 1190. [Google Scholar] [PubMed]
- Tariq, F.N.; Shafiq, M.; Khawar, N.; Habib, G.; Gul, H.; Hayat, A.; Rehman, M.U.; Moussa, I.M.; Mahmoud, E.A.; Elansary, H.O. The Functional Repertoire of AmpR in the AmpC β-Lactamase High Expression and Decreasing β-Lactam and Aminoglycosides Resistance in ESBL Citrobacter Freundii. Heliyon 2023, 9, e19486. [Google Scholar] [CrossRef] [PubMed]
All Citrobacter Species (N = 33,958) | C. koseri (N = 17,173) | C. freundii (N = 13,540) | Other Citrobacter spp. (N = 3245) | p-Value | ||||||
---|---|---|---|---|---|---|---|---|---|---|
n | (%) | n | (%) | n | (%) | n | (%) | |||
Age (years) | <18 | 1780 | (5.2) | 764 | (4.4) | 800 | (5.9) | 216 | (6.7) | <0.01 |
18–64 | 11,285 | (33.2) | 6307 | (36.7) | 4030 | (30.0) | 948 | (29.2) | ||
≥65 | 20,893 | (61.5) | 10,102 | (58.8) | 8710 | (64.0) | 2081 | (64.1) | ||
Sex | Female | 15,043 | (44.0) | 6456 | (38.0) | 6891 | (51.0) | 1696 | (52.0) | <0.01 |
Male | 18,908 | (56.0) | 10,714 | (62.0) | 6645 | (49.0) | 1549 | (48.0) | ||
Unknown | 7 | 3 | 4 | 0 | ||||||
Linguistic region * | German-speaking | 24,813 | (73.0) | 12,559 | (73.0) | 10,123 | (75.0) | 2131 | (66.0) | <0.01 |
Latin-speaking | 9145 | (27.0) | 4614 | (27.0) | 3417 | (25.0) | 1114 | (34.0) | ||
Hospital type | University hospital | 14,015 | (41.0) | 7297 | (42.0) | 5703 | (42.0) | 1015 | (31.0) | <0.01 |
Non-university hospital | 19,943 | (59.0) | 9876 | (58.0) | 7837 | (58.0) | 2230 | (69.0) | ||
Location of consultation | Inpatient | 23,593 | (69.0) | 11,286 | (66.0) | 9901 | (73.0) | 2406 | (74.0) | <0.01 |
Outpatient | 10,365 | (31.0) | 5887 | (34.0) | 3639 | (27.0) | 839 | (26.0) | ||
Unit of hospitalization | ICU admission | 2433/23,593 | (10.3) | 1136/11,286 | (10.1) | 1048/9901 | (10.6) | 249/2406 | (10.3) | 0.5 |
No ICU admission | 21,160/23,593 | (89.7) | 10,150/11,286 | (89.9) | 8853/9901 | (89.4) | 2157/2406 | (89.6) | ||
Sample type | Blood | 1522 | (4.5) | 610 | (3.6) | 703 | (5.2) | 209 | (6.4) | <0.01 |
Gastrointestinal tract | 1092 | (3.2) | 135 | (0.8) | 693 | (5.1) | 264 | (8.1) | ||
Respiratory tract | 3917 | (11.5) | 1973 | (11.5) | 1695 | (12.5) | 249 | (7.7) | ||
Urinary tract | 19,699 | (58.0) | 10,935 | (63.7) | 7185 | (53.1) | 1579 | (48.7) | ||
Other | 7728 | (22.8) | 3520 | (20.5) | 3264 | (24.1) | 944 | (29.1) |
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content. |
© 2025 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
Share and Cite
Fonton, P.; Grant, R.; Gasser, M.; Buetti, N.; Kronenberg, A.; Harbarth, S. Incidence and Resistance Patterns of Citrobacter spp. in Switzerland: A Nationwide, Retrospective Surveillance Study (2010–2022). Microorganisms 2025, 13, 786. https://doi.org/10.3390/microorganisms13040786
Fonton P, Grant R, Gasser M, Buetti N, Kronenberg A, Harbarth S. Incidence and Resistance Patterns of Citrobacter spp. in Switzerland: A Nationwide, Retrospective Surveillance Study (2010–2022). Microorganisms. 2025; 13(4):786. https://doi.org/10.3390/microorganisms13040786
Chicago/Turabian StyleFonton, Pérince, Rebecca Grant, Michael Gasser, Niccolò Buetti, Andreas Kronenberg, and Stephan Harbarth. 2025. "Incidence and Resistance Patterns of Citrobacter spp. in Switzerland: A Nationwide, Retrospective Surveillance Study (2010–2022)" Microorganisms 13, no. 4: 786. https://doi.org/10.3390/microorganisms13040786
APA StyleFonton, P., Grant, R., Gasser, M., Buetti, N., Kronenberg, A., & Harbarth, S. (2025). Incidence and Resistance Patterns of Citrobacter spp. in Switzerland: A Nationwide, Retrospective Surveillance Study (2010–2022). Microorganisms, 13(4), 786. https://doi.org/10.3390/microorganisms13040786