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Article

Portable Lab for Shipping (POLS): A Biosensor-Based System for Rapid Onboard Detection of Escherichia coli and Enterococcus spp. in Ballast Water

by
Stephanie Agioti
1,
Emmanouil Loulakis
1,
Lazaros Konstantinou
2,
Eleni Varda
2,
Antonios Inglezakis
2,
Konstantinos Loizou
2,
Theofylaktos Apostolou
2 and
Agni Hadjilouka
1,2,*
1
Department of Life Sciences, School of Sciences, European University Cyprus, 2404 Nicosia, Cyprus
2
EMBIO Diagnostics Ltd., Athalassas, 2018 Nicosia, Cyprus
*
Author to whom correspondence should be addressed.
Microorganisms 2025, 13(12), 2878; https://doi.org/10.3390/microorganisms13122878
Submission received: 16 October 2025 / Revised: 8 December 2025 / Accepted: 15 December 2025 / Published: 18 December 2025

Abstract

Ballast water (BW) is a major pathway for the spread of invasive microorganisms and pathogens, posing significant ecological and public health risks. The International Maritime Organization (IMO) has established strict discharge standards, yet routine monitoring remains limited, and no reliable onboard test is currently available to assist crews in verifying BW quality before discharge. This study presents the development of a rapid, portable method for onboard microbiological assessment of BW, based on potentiometric detection and biosensors engineered with the Bioelectric Recognition Assay (BERA). Two complementary approaches were evaluated: (i) direct potentiometric measurements of contaminated and non-contaminated samples, which confirmed the feasibility of detecting microbial presence but were restricted by high detection limits, and (ii) development of biosensors specifically engineered for Escherichia coli and Enterococcus spp. to improve specificity and lower the limit of detection (LOD). Results demonstrated successful detection of both microorganisms, with performance characteristics of 83.3% sensitivity and 81.9% accuracy for Enterococcus spp. (LOD: 102 CFU 100 mL−1), and 89.8% sensitivity and 85.1% accuracy for Escherichia coli (LOD: 250 CFU 100 mL−1). These findings underscore the potential of biosensor-based systems as practical, crew-operated tools for early warning and real-time monitoring of ballast water quality, supporting compliance with IMO standards and contributing to safer, more sustainable maritime operations.

1. Introduction

Maritime trade remains the dominant mode of transporting goods globally. Over 80% of international trade by volume occurs via oceans, with ships transporting an estimated 11.6–12.3 billion tons of cargo annually as of 2023 [1]. While ballast water (BW) is essential for vessel safety, it also poses serious ecological, economic, and public health risks due to the unintentional transport of marine organisms. BW refers to water taken from coastal areas at ports and stored in designated tanks aboard ships. It is crucial for ensuring a vessel’s stability and maintaining proper displacement, especially when the ship is lightly loaded or empty. Additionally, BW can be used to increase the ship’s draft, allowing it to submerge further when needed, such as when navigating under bridges [2]. As a ship’s weight changes frequently during loading and unloading at various ports, BW must be pumped in or discharged to maintain safe stability conditions [3].
The uptake and discharge of BW can introduce non-native organisms into marine ecosystems, a process identified by the International Maritime Organization (IMO) as one of the greatest global threats to marine biodiversity. BW may carry thousands of aquatic microbes, plants, and animals, which can establish themselves in new environments and cause widespread ecological damage. Although most microorganisms in BW are harmless, studies have identified dozens of potentially pathogenic species, including Vibrio, Pseudomonas, Acinetobacter, Escherichia coli (E. coli), and Staphylococcus aureus, in samples worldwide [4,5].
To mitigate these risks, the IMO adopted the BW Management Convention in 2004, which remains in force [6]. Under this agreement, all ships on international voyages must treat their BW before discharge in accordance with the approved standards. Ships are also required to maintain a BW Record Book and carry an International Ballast Water Management (IBWM) Certificate. Discharging untreated BW that does not meet IMO standards [7] can result in substantial financial penalties [8].
Despite widespread adoption of BW treatment systems, port inspections frequently report non-compliance. Currently, testing is performed exclusively by Port State Control (PSC) authorities, as ships lack onboard analytical capability. Implementing such onboard testing would allow crews to verify treatment efficiency in real time and take corrective action when necessary [9]. However, full compliance testing generally requires complex sampling procedures and the assistance of trained specialists to support PSC officers during inspections.
The IMO has set strict microbiological discharge limits for three key indicator organisms: E. coli, intestinal Enterococci, and Vibrio cholerae (V. cholerae). According to the D-2 standard, V. cholerae must be absent from 100 mL, E. coli must be less than 250 CFU 100 mL−1, and intestinal Enterococci must remain below 100 CFU 100 mL−1 [10].
In addition to serving as regulatory indicators, these microorganisms also pose direct health risks. E. coli, while a normal inhabitant of the human gut, includes pathogenic strains capable of causing gastrointestinal illness, pneumonia, and hemolytic–uremic syndrome, and is widely used as a marker of fecal contamination [11,12]. Intestinal Enterococci, primarily Enterococcus faecalis and Enterococcus faecium, are recognized as important indicators of fecal contamination, exhibiting notable antibiotic resistance, which complicates the treatment of enterococcal infections [13]. V. cholerae, particularly the O1 and O139 serogroups, can cause cholera, a severe diarrheal disease responsible for thousands of deaths annually [14,15].
To comply with regulations, reliable monitoring methods are critical. Traditional culture-based techniques remain the gold standard, offering both qualitative and quantitative results. However, these methods require incubation periods of several days before definitive results are available [16,17]. Flow cytometry offers faster analysis but requires expensive laboratory equipment and highly trained personnel to perform the tests [18,19]. In addition, molecular techniques like Polymerase Chain Reaction (PCR) and Nucleic Acid-Based Sequence Amplification (NASBA) have revolutionized BW pathogen detection. They enable rapid, culture-free identification of organisms such as E. coli and V. cholerae with high sensitivity [20]. Despite these advantages, these methods require specialized equipment, trained personnel, and controlled laboratory conditions, which limit their feasibility for routine onboard use. Similarly, while advanced technologies such as photonic immunosensors, nanostructure enhancement, and impedance-based microchips achieve low detection limits, they lack the ruggedness, simplicity, and rapid deployment necessary for maritime environments [21,22].
This underscores the urgent need for simple, field-deployable methods capable of providing real-time onboard detection. To address these limitations, portable indicative testing kits have been developed for use directly on ships. Examples include marine potable water kits for coliform and E. coli detection, commercially available from Parker Kittiwake and DTK Water. These rely on dipslides that exhibit visible color changes under fluorescence or UV illumination after an incubation period of 24 h, indicating bacterial presence [23,24]. Similarly, the Vermicon’s Scan VIT® E. coli/Enterococci test kit, which applies a FISH-based approach, yields results within 12 h [25]. Another portable option, the Luminultra B-QUA system, utilizes ATP-based detection to estimate cellular ATP (cATP) activity, offering semi-quantitative indications such as most likely compliant, close to limit, or most likely non-compliant within approximately 1 h [26]. Collectively, these existing tools provide only indicative results and require either lengthy incubation or specialized handling, highlighting the persistent gap between laboratory accuracy and operational feasibility. Therefore, the development of a new, rapid, and user-friendly method capable of delivering real-time microbial detection directly onboard is both necessary and timely.
To address this gap, this study developed a real-time, portable method for evaluating the microbiological quality of BW before uptake. The goal was to provide crews with an early-warning system capable of identifying microbial concentrations exceeding regulatory thresholds, thus prompting timely treatment. A portable potentiometric device (EMBIO Diagnostics Ltd., Nicosia, Cyprus) was used to monitor changes in electric potential, offering intuitive, real-time readings aligned with IMO standards (Figure 1).

2. Materials and Methods

2.1. Materials and Reagents

Monkey African green kidney (Vero) cell cultures were provided from LGC Promochem (Teddington, UK). Fetal bovine serum (FBS), antibiotics (streptomycin–penicillin), L-glutamine and L-alanine, and trypsin/EDTA (ethylenediaminetetraacetic acid) were purchased from Sigma-Aldrich (Taufkirchen, Germany). Monoclonal antibodies against E. coli [anti-E.coli antibody, ABIN3027591], Enterococcus spp. [anti-Enterococcus antibody, ABIN3027582] and V. cholerae [anti-V. cholerae ABIN344551] were purchased from Antibodies online (Limerick, PA, USA). Sodium chloride was purchased from Merck (Darmstadt, Germany), Brain Heart Infusion (BHI) from Biolife (Milan, Italy), Harlequin UTI Chromogenic Agar from Neogen (Lansing, MI, USA) and Thiosulfate Citrate Bile Salts sucrose (TCBS) from Neogen (Lansing, MI, USA).

2.2. Study Design

The study was structured and conducted in two phases. In the first phase, direct potentiometric measurements were performed on contaminated and non-contaminated samples. Specifically, E. coli and Enterococcus spp. (i.e., E. faecium and E. faecalis) were tested at four different concentrations (102, 103, 105, and 107 CFU 100 mL−1), along with control samples of ballast water. Each sample first underwent a pre-filtration step using a 10 μm pore size filter (Macherey-Nagel, Düren, German) to remove larger eukaryotic microorganisms, such as protozoa. The pre-filtered water was collected in sterile Duran glass containers. Each sample was then contaminated with different concentrations of the under-study bacteria (100 mL in total) and then passed through a sterile cellulose ester membrane filter (47 mm diameter, 0.45 μm pore size, Cytiva, Buckinghamshire, UK), which retained the bacterial cells. The filters were then transferred into 2 mL buffer solution to release microorganisms for B.EL.DTM analysis. The same filtration steps were followed also for the non-contaminated samples (control samples).
In the second phase, specific biosensors targeting E. coli and Enterococcus spp. were developed to eliminate the limitations of the first phase’s experiments. The filtration procedure followed the same protocol as in phase one; however, in the second phase, the concentrations of the microorganisms were adjusted at lower levels. The selected concentrations for each bacterium were determined according to their respective IMO threshold limits. The chosen concentrations were 250, 500, 103, and 104 CFU 100 mL−1 for E. coli, and 102, 500, 103, and 104 CFU 100 mL−1 for Enterococcus spp. Figure 2 is a schematic representation of the filtration and testing procedure of the new method.

2.3. Cell Culture and Biosensor Development

African green monkey kidney (Vero) cells were used throughout the study, as they constitute the established cellular platform for BERA biosensors. Their stable membrane composition, ease of antibody electroinsertion, and ability to generate robust and reproducible electrical responses make them highly suitable for this application. The use of Vero cells in BERA-based pathogen and chemical detection has been extensively validated in previous studies [27,28,29]. In this work, the cells were maintained following the previously described procedure by Apostolou et al. [27]. Briefly, the cells were grown in Dulbecco’s Modified Eagle Medium (DMEM) supplemented with 10% fetal bovine serum (FBS), 10% streptomycin/penicillin, and 10% L-glutamine and L-alanine. Cultures were incubated at 37 °C in a humidified atmosphere containing 5% CO2. To detach the cells, trypsin/EDTA solution was added and incubated for 10 min at 37 °C. Membrane-engineered cells were then produced, using the BERA method, according to previously established protocols [28,29]. Specifically, the harvested cell pellet was resuspended in phosphate-buffered saline containing 5 μg mL−1 of either the anti-E. coli, or the anti-Enterococcus antibodies and incubated in ice for 20 min. The anti-E. coli antibody is a goat polyclonal antibody raised against multiple E. coli serotypes and is specific to a broad range of E. coli strains. The anti-Enterococcus antibody is a rabbit polyclonal antibody raised against whole Enterococcus faecium cells and reported as reactive with whole Enterococcus species, with possible limited cross-reactivity to related microbes due to its unabsorbed nature. Both antibodies were >95% purified and validated for microbial detection applications. The resulting cell–antibody suspension was placed in electroporation cuvettes, and electroinsertion was performed by applying two square-wave electric pulses at 1800 V/cm using an Eppendorf Eporator (Hamburg, Germany). The transfected cells were subsequently incubated in nutrient medium at 37 °C with 5% CO2 for 24 h. After incubation, the medium was discarded, and the Vero/anti-[E. coli or Enterococcus] cells were mechanically detached and collected in nutrient medium into Eppendorf tubes.

2.4. Bacteria Culturing and Sensor Fabrication from Vero Cells

The study utilized Escherichia coli ATCC 10536, Enterococcus faecalis ATCC 29212, and Enterococcus faecium ATCC 700221, and Vibrio cholerae ATCC 9459. Although the legislation refers to intestinal enterococci in general, E. faecalis and E. faecium were used throughout this study as representative species for practical and scientific reasons, as they are the most prevalent and well-characterized members of this group and are widely employed as model microorganisms.
The bacterial strains were stored at −20 °C in nutrient broth containing 50% glycerol. Before use, each strain was cultured twice in BHI broth at 37 °C for 24 h. Experimental assays were conducted using cultures of E. coli, Enterococcus spp. and V. cholerae, with concentrations of 8 log CFU mL−1 after 24 h incubation at 37 °C. Before each experiment, cultures were centrifuged for 15 min at 3500 rpm at 4 °C, washed twice with MRD diluent, and resuspended in the same diluent. Then successive dilutions were performed to achieve the expected concentrations.
During the first phase, samples were analyzed potentiometrically (without the use of biosensors) to establish baseline responses. Four concentrations of each bacterium were tested—102, 103, 105, and 107 CFU 100 mL−1—along with a control sample. In the second experimental phase, the focus shifted toward evaluating the IMO regulatory thresholds, which were set at 0 CFU 100 mL−1 for V. cholerae, 100 CFU 100 mL−1 for Enterococcus spp. and 250 CFU 100 mL−1 for E. coli. The upper permissible limits defined by the IMO for these microorganisms were included, since it was anticipated that the biosensor-based detection method could enable the reliable identification of considerably lower microbial concentrations. Specifically, for Enterococcus spp., samples were prepared at control levels and at 102, 500, 103, and 104 CFU 100 mL−1, while for E. coli, samples included control and concentrations of 250, 500, 103, and 104 CFU 100 mL−1. Organism presence or absence was evaluated using UTI—a specific culture media in which E. coli is shown by red colonies and Enterococcus spp. by turquoise colonies.
Due to legislation mandating the absence of V. cholerae in 100 mL of BW, preliminary studies were conducted to investigate the feasibility of the new method to detect the pathogen at very low population levels (≈10 CFU mL−1). The results indicated that the detection of the microorganism was not feasible at such concentrations. Considering the importance of sample enrichment for the detection of microorganisms whose regulatory limits require their complete absence, no further investigation was pursued for this microorganism, as higher detection limits would have had no practical relevance under the current regulatory framework. Therefore, none of the results related to this bacterium are presented in this study.

2.5. Assay Procedure

All assays were performed using the B.EL.D™ device, a portable device developed by EMBIO Diagnostics Ltd. in Strovolos, Cyprus. This multichannel potentiometric instrument is equipped with high-precision analog-to-digital converters capable of detecting bioelectric signals from cellular biorecognition elements. These elements are deposited onto eight channel disposable screen-printed electrodes (SPEs) connected through a replaceable underside connector, enabling simultaneous multichannel analysis. When combined with BERA technology, the device enables accurate, rapid, and high throughput testing of samples. As Kintzios and collaborators previously described, the Bioelectric Recognition Assay (BERA) (ImmuSmol, Strasbourg, France) is a cell-based biosensing technique in which membrane-engineered, antibody-functionalized living cells generate quantifiable alterations in transmembrane potential upon selective analyte binding. These bioelectric perturbations are rapidly transduced into electrical signals, enabling highly sensitive, real-time, and label-free detection of specific biological targets [29]. During all measurements, the device operated under standardized settings: a sampling rate of 4 samples per second (4 SPS), eight parallel channels, and disposable SPEs consisting of a carbon working electrode and an Ag/AgCl reference electrode. The counter-electrode function was internally neutralized by the instrument’s circuitry and wireless data transmission was achieved via Bluetooth 4.0 for real-time monitoring [30].
Ballast water samples were provided by EMBIO Diagnostics’ industrial partner in the maritime sector, specialized in marine fuel supply and trading and operating in the port of Limassol (Cyprus). In all experiments, the SPEs operated in potentiometric (open-circuit potential) mode, detecting changes in electric potential (Volts) over time. In Phase 1, the electrodes recorded the intrinsic potentiometric signal of each ballast water sample applied directly onto the carbon working electrode. In Phase 2, the electrodes recorded the bioelectric response generated by the membrane-engineered Vero cells after exposure to the sample. All recordings consisted of time-series voltage data acquired at 4 SPS. More accurately, for the first experimental phase, 40 μL of each sample were applied directly to the eight channels of the electrodes, and measurements were recorded for one minute. For the second experimental phase, 20 μL of the biosensors was added on the electrode’s channels and then 20 μL of the sample suspension was added on top of the biosensor’s drop. Contaminated and non-contaminated ballast water samples were compared, and the resulting data were analyzed to identify microorganism concentrations that produced significant differences in electric potential. An algorithm was then developed to classify samples as either within or exceeding regulatory limits, providing an initial assessment of ballast water quality.

2.6. Data Processing and Algorithm Development

Each experiment produced a time series consisting of 720 voltage measurements per sample. Data processing was performed in Python (version 3.9) following the analytical framework described by Hadjilouka et al. [29]. The analysis involved two main stages, from which four feature vectors were derived. In total, 18 characteristic parameters were extracted and used to develop an algorithm for sample discrimination. In brief, these 18 parameters correspond to the features extracted from the cleaned potentiometric time-series data recorded by the 8 electrode channels. For each channel, two parameters were calculated: (i) the mean value of the cleaned signal and (ii) the minimum rolling-average value (window size 50). These two features were also computed once more across all 8 channels combined (overall mean and overall minimum rolling average). Thus, the final feature vector consisted of 2 parameters × 8 channels + 2 overall parameters (18 parameters) used for sample discrimination and algorithm development.
The results obtained from contaminated and non-contaminated samples were statistically compared using one-way analysis of variance (ANOVA) applied to the final processed output of each sample, following feature extraction and vector construction. This statistical comparison was used to identify significant differences (p < 0.05) between groups, from which the limit of detection (LOD) and threshold values distinguishing positive from negative samples were determined. Once these thresholds were established, the system automatically classified each new measurement as above or below the LOD in real time.
Finally, the performance of the newly developed method was evaluated in both phases by comparing its results with those obtained using traditional culture-based techniques. The parameters used to assess the method’s performance included sensitivity (Se: the ability of a test to correctly classify a sample as positive), specificity (Sp: the percentage of negative samples correctly identified by the test), positive predictive value (PPV: the probability that a sample is positive given a positive test result), and negative predictive value (NPV: the probability that a sample is negative given a negative test result).

3. Results

The objective of this study was to develop a rapid method for detecting E. coli and intestinal Enterococci and V. cholerae in BW prior to uptake, providing crews with an early warning system to identify microbial concentrations exceeding regulatory thresholds, in line with IMO standards. To achieve this, two experimental approaches were followed. The first involved direct potentiometric measurements of contaminated and non-contaminated samples, which demonstrated the feasibility of distinguishing microbial presence but were limited by background interference and relatively high detection thresholds. To overcome these limitations, a second approach was implemented using biosensors specifically engineered for these microorganisms. This strategy aimed to enhance specificity and lower the limit of detection, thereby allowing more reliable identification of microbial loads close to regulatory thresholds. Since detection of V. cholerae was not pursued beyond preliminary trials, no results for this bacterium will be presented in the current study.
B.EL.DTM Response to Varying Concentrations of E. coli and Enterococcus spp.: The measured electric potential in response to varying E. coli concentrations is shown in Figure 3a. The LOD in this approach was defined at 105 CFU 100 mL−1 for E. coli, Enterococcus spp., and their combined presence. For E. coli, 71 experiments were conducted, of which 41 yielded successful detections. The dataset included 3 false positives, 18 true negatives, and 9 false negatives. Overall, the method achieved 84.5% accuracy, 84% sensitivity, 85.7% specificity, a positive predictive value (PPV) of 93.3%, and a negative predictive value (NPV) of 69.2%. For Enterococcus spp., a total of 78 experiments were conducted, of which 55 detected successfully the microorganism. There were 3 false positives, 18 true negatives, and 2 false negatives. Based on these results, the method demonstrated an accuracy of 93.6%, a sensitivity of 96.5%, a specificity of 85.7%, a positive predictive value of 94.8%, and a negative predictive value of 90% (Table 1). The potential dynamics obtained from the B.EL.DTM device showed that at higher concentrations (105 and 107 CFU 100 mL−1), both E. coli and Enterococcus spp. were clearly distinguishable from negative controls (Figure 3). At lower concentrations, significant overlap with control samples was observed, likely due to naturally occurring background microorganisms in seawater. This interference, combined with the limited specificity of the basic potentiometric method, reduced detection clarity at low microbial levels.
A total of 75 experiments were then carried out using mixed samples containing both E. coli and Enterococcus spp., of which 53 yielded successful detection of the microorganisms. At higher concentrations, the microorganisms were again clearly differentiated from negative controls (Figure 4), whereas overlap at lower levels followed the same pattern observed previously. The results included 5 false positives, 16 true negatives, and 1 false negative. Overall, the method achieved 92% accuracy, 98.1% sensitivity, 76.1% specificity, a PPV of 91.3%, and an NPV of 94.1% (Table 1).
Biosensor’s Response to Varying Concentrations of E. coli and Enterococcus spp.: Following the initial experiments with direct potential measurements, specialized biosensors were developed to enable specific detection of each microorganism at lower concentrations. The dynamic changes in potential measured in relation to microorganism concentration are presented in Figure 5. In this approach, the LOD was finally set at 250 CFU 100 mL−1 for E. coli and 102 CFU 100 mL−1 for Enterococcus spp., in accordance with IMO regulatory standards.
For E. coli, a total of 67 experiments were performed. When the LOD was set at 250 CFU 100 mL−1, the method correctly detected 44 cases, with 5 false positives, 13 true negatives, and 5 false negatives. The corresponding performance metrics were 85.1% accuracy, 89.8% sensitivity, 72.2% specificity, 89.8% PPV, and 72.2% NPV. Similar results were obtained when the detection threshold was increased to 500 CFU 100 mL−1. At higher microbial concentrations (103 and 104 CFU 100 mL−1), the method clearly differentiated positive from negative samples, achieving excellent accuracy (92% and 97%, respectively) and robust performance characteristics (Table 2).
As shown in Figure 5b, and consistent with the results for E. coli, the biosensor’s performance for Enterococcus spp. was also satisfactory, showing reliable detection even at lower concentrations (102 CFU 100 mL−1). A total of 72 experiments were conducted, and at an LOD of 102 CFU 100 mL−1, the method achieved 81.9% accuracy, 83.3% sensitivity, 80% specificity, 85.4% PPV, and 77.4% NPV. Comparable results were observed at 500 CFU 100 mL−1, while the highest accuracy (92.2% and 97.4%) and discrimination ability were obtained at elevated concentrations (103 and 104 CFU 100 mL−1), as summarized in Table 2.

4. Discussion

Two complementary experimental approaches were applied in this study to assess the feasibility of a rapid, crew-operated method for evaluating the microbiological quality of BW. The first approach focused on direct potentiometric measurements of both contaminated and non-contaminated samples. The goal was to determine whether simple electrical potential readings could serve as a quick onboard alert system, allowing ship crews to identify potentially non-compliant water and initiate re-treatment before discharge. The findings showed that samples containing microorganisms could indeed be distinguished from clean ballast water. However, the method’s LOD (105 CFU 100 mL−1) was high compared to the limits set by IMO. This outcome was expected, as the approach did not incorporate any microorganism-specific biorecognition component.
To address this limitation, a second, biosensor-based approach was developed, specifically targeting E. coli and Enterococcus spp. (i.e., E. faecium and E. faecalis). By integrating antibodies into the Vero cell’s membranes and utilizing these biosensors, the system achieved selective recognition of each microorganism, significantly improving both sensitivity and specificity. As a result, the LOD was reduced to IMO-relevant levels 250 CFU 100 mL−1 for E. coli and 102 CFU mL−1 for Enterococcus spp. The substantial decrease in the detection limits observed in Phase 2 can be directly attributed to the use of membrane-engineered Vero cells carrying microorganism-specific antibodies. These biosensors introduce a selective biorecognition interface, enabling the device to distinguish target microorganisms from background microbiota, something that was not achievable with direct potentiometric measurements alone. This mechanistic contribution explains the marked improvement in analytical performance and further highlights the central role of the antibody-engineered cells in the enhanced sensitivity and specificity of the method. Together, these two methods represent a clear technological progression: from a general, rapid alert mechanism to a targeted, regulation-compliant detection system.
Recent advances in microfluidic and impedance-based detection technologies have further driven the field forward. For example, dielectrophoretic lab-on-chip platforms have detected approximately 69 ± 33 E. coli and 95 ± 34 Enterococcus cells within ten minutes in simulated BW [31]. Moreover, studies using potentiometric and phage-based sensors support the robustness of cell sensor interface mechanisms for detecting E. coli in aquatic matrices [32]. These results highlight the analytical power of such technologies; however, their reliance on controlled laboratory environments, delicate instrumentation, and complex fluid handling currently limits their deployment onboard ships. At the same time, the performance of existing commercial ballast water test kits underscores the importance of developing more advanced solutions. Although portable systems, they remain largely semi-quantitative, time-intensive, and influenced by operator expertise and environmental variability. This highlights the ongoing need for rapid, sensitive, and reliable onboard diagnostic technologies capable of delivering immediate and quantitative results.
The B.EL.D™ platform presented in this study offers a simpler and more robust alternative for shipboard applications. Its solid-state potentiometric design requires no flow control, optics, or sample labeling, while its Bluetooth-enabled interface allows real-time result visualization on a smartphone or tablet. The device functions reliably under typical shipboard conditions and vibration, salinity, and temperature fluctuations, and can be operated by minimally trained personnel. This makes it particularly suitable for rapid pre-discharge verification, helping crews ensure compliance with IMO D-2 standards [7], avoid costly port penalties and support proactive environmental protection.
Despite its clear advantages and strong analytical performance, some aspects of the system can be further optimized. The current biosensor design employs living cells as the biorecognition element, a configuration that has proven effective but naturally imposes a specific operational lifespan. This characteristic presents practical challenges for long-term storage and continuous usability, particularly in shipboard settings where diagnostic kits must remain ready for deployment during extended voyages far from port, with restricted access to replenishment. Moreover, detection of V. cholerae was not pursued beyond preliminary trials, as IMO regulations require its complete absence in 100 mL samples. This regulatory zero-tolerance standard makes single-cell detection impractical with field-deployable biosensors. This limitation reflects the stringent requirement rather than a technical failure of the method, underscoring the need for complementary approaches for such pathogens. Moreover, this study focused on ATCC reference strains because these are the internationally accepted model organisms used for validation of ballast water testing technologies. They provide consistent growth behavior and regulatory relevance. Nonetheless, future work will include additional E. coli and Enterococcus environmental isolates to further assess strain-to-strain variability.
Building on the success of the existing platform, future research will focus on enhancing its robustness and durability. A key direction involves functionalizing and immobilizing antibodies directly onto the sensor’s electrode surfaces, a modification expected to preserve the system’s high sensitivity while significantly improving its stability, shelf life, and overall performance under real maritime conditions. Optimization of antibody density will also be explored to maximize signal-to-noise ratios and fine-tune detection efficiency, including revisiting Vibrio cholerae detection using lower or higher antibody concentrations. In parallel, additional improvements are being pursued, such as integrating microfluidic pre-concentration modules to increase the effective bacterial load delivered to the biorecognition interface and incorporating short enrichment steps to further enhance sensitivity. Ongoing work aims to combine these advances into a next-generation platform with regulatory-level performance. Under these improved conditions, evaluating LOD values below the IMO thresholds will become scientifically meaningful and will be incorporated in subsequent validation phases.

5. Conclusions

This study developed and validated a rapid, portable method for detecting Escherichia coli and Enterococcus spp. in ballast water, enabling real-time onboard assessment of microbial compliance with IMO D-2 standards. Two complementary approaches were applied: direct potentiometric measurements for rapid screening and microorganism-specific biosensors integrated into the B.EL.D™ platform for enhanced sensitivity and specificity. The biosensor-based system achieved detection limits of 250 CFU 100 mL−1 for E. coli and 102 CFU 100 mL−1 for Enterococcus spp., demonstrating high accuracy and reliability under simulated field conditions. Compared with conventional and molecular techniques, the B.EL.D™ platform offers faster analysis, minimal sample preparation, and user-friendly operation without laboratory infrastructure. Future improvements will focus on enhancing performance at lower microbial concentrations and expanding detection to additional indicator species. Overall, the B.EL.D™ biosensor provides a practical, regulation-compliant tool for autonomous ballast water monitoring and sustainable maritime operations.

Author Contributions

Conceptualization, A.H., T.A. and K.L.; methodology, A.H.; software/hardware: A.I.; data curation, A.H. and L.K.; investigation: E.L., L.K. and E.V.; validation, A.H.; writing—original draft preparation, S.A.; writing—review and editing, L.K., A.H.; supervision, A.H.; project administration T.A.; funding acquisition: L.K. and T.A. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by The RESTART 2016–2020 Programmes for Research, Technological Development and Innovation of the Research and Innovation Foundation (RIF) in Cyprus (project “Proof Of Concept For Technology/Knowhow Applications”—CONCEPT/0722/0007).

Institutional Review Board Statement

Not applicable.

Informed Consent Statement

Not applicable.

Data Availability Statement

The data presented in this study are not publicly available due to legal and intellectual property restrictions, as they are proprietary to the company involved. Data may be made available from the corresponding author upon reasonable request and with permission of the data owner.

Acknowledgments

During the preparation of this manuscript/study, the authors used ChatGPT (GPT-5, OpenAI) for the purposes of grammar and syntax correction, as well as overall language improvement. The AI tool was also employed to generate Figure 1 and Figure 2 for illustrative purposes. The authors have reviewed and edited the output and take full responsibility for the content of this publication.

Conflicts of Interest

Authors Lazaros Konstantinou, Eleni Varda, Antonios Inglezakis, Konstantinos Loizou, Theofylaktos Apostolou and Agni Hadjilouka are employed by the company EMBIO Diagnostics Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Figure 1. Real-Time Onboard Monitoring of Ballast Water Discharges in Global Shipping: IMO D-2 Compliance and the Detection of E. coli, intestinal Enterococci and V. cholerae (AI-generated illustration). The (*) symbol and the red/blue colored dots represent microorganisms discharged into the sea and detected by the new method.
Figure 1. Real-Time Onboard Monitoring of Ballast Water Discharges in Global Shipping: IMO D-2 Compliance and the Detection of E. coli, intestinal Enterococci and V. cholerae (AI-generated illustration). The (*) symbol and the red/blue colored dots represent microorganisms discharged into the sea and detected by the new method.
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Figure 2. Testing procedure of the newly developed method (AI-generated illustration).
Figure 2. Testing procedure of the newly developed method (AI-generated illustration).
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Figure 3. (a) Biosensor response to final E. coli concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. (b) Biosensor response to final Enterococcus spp. concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. Error bars represent the standard error of the mean from all replicates. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
Figure 3. (a) Biosensor response to final E. coli concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. (b) Biosensor response to final Enterococcus spp. concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. Error bars represent the standard error of the mean from all replicates. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
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Figure 4. Biosensor response to final E. coli and Enterococcus spp. concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. Errors bars show the standard errors of the mean value of all replications. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
Figure 4. Biosensor response to final E. coli and Enterococcus spp. concentrations of 102, 103, 105, and 107 CFU 100 mL−1, including a control. Errors bars show the standard errors of the mean value of all replications. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
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Figure 5. Biosensor response in presence of (a) E. coli and (b) Enterococcus spp. in ballast water samples. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
Figure 5. Biosensor response in presence of (a) E. coli and (b) Enterococcus spp. in ballast water samples. Statistically significant differences in redox potential between the samples are indicated by asterisks (p-value < 0.05).
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Table 1. Performance characteristics of the B.EL.DTM device in presence of E. coli, Enterococcus spp., and their combination in ballast water samples, with LOD 105 CFU 100 mL−1.
Table 1. Performance characteristics of the B.EL.DTM device in presence of E. coli, Enterococcus spp., and their combination in ballast water samples, with LOD 105 CFU 100 mL−1.
IndicesE. coliEnterococcus spp.E. coli and Enterococcus spp.
Accuracy84.5%93.6%92.0%
Sensitivity84.0%96.5%98.1%
Specificity85.7%85.7%76.1%
Positive Predictive Value93.3%94.8%91.3%
Negative Predictive Value69.2%90.0%94.1%
Table 2. Performance characteristics of the B.EL.D™ biosensor for the detection of E. coli and Enterococcus spp. at different microbial concentrations (expressed in CFU 100 mL−1). The table summarizes accuracy, sensitivity, specificity, PPV, and NPV for each tested detection threshold.
Table 2. Performance characteristics of the B.EL.D™ biosensor for the detection of E. coli and Enterococcus spp. at different microbial concentrations (expressed in CFU 100 mL−1). The table summarizes accuracy, sensitivity, specificity, PPV, and NPV for each tested detection threshold.
IndicesE. coli (CFU 100 mL−1)Enterococcus spp. (CFU 100 mL−1)
250500103104102500103104
Accuracy85.1%84%92%97%81.9%83.6%92.2%97.4%
Sensitivity89.8%90%97%100%83.3%83.9%85.7%100%
Specificity72.2%72%83%94%80%83.3%96.7%96.7%
PPV89.8%88%91%95%85.4%83.9%94.7%90%
NPV72.2%76%94%100%77.4%83.3%90.6%100%
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MDPI and ACS Style

Agioti, S.; Loulakis, E.; Konstantinou, L.; Varda, E.; Inglezakis, A.; Loizou, K.; Apostolou, T.; Hadjilouka, A. Portable Lab for Shipping (POLS): A Biosensor-Based System for Rapid Onboard Detection of Escherichia coli and Enterococcus spp. in Ballast Water. Microorganisms 2025, 13, 2878. https://doi.org/10.3390/microorganisms13122878

AMA Style

Agioti S, Loulakis E, Konstantinou L, Varda E, Inglezakis A, Loizou K, Apostolou T, Hadjilouka A. Portable Lab for Shipping (POLS): A Biosensor-Based System for Rapid Onboard Detection of Escherichia coli and Enterococcus spp. in Ballast Water. Microorganisms. 2025; 13(12):2878. https://doi.org/10.3390/microorganisms13122878

Chicago/Turabian Style

Agioti, Stephanie, Emmanouil Loulakis, Lazaros Konstantinou, Eleni Varda, Antonios Inglezakis, Konstantinos Loizou, Theofylaktos Apostolou, and Agni Hadjilouka. 2025. "Portable Lab for Shipping (POLS): A Biosensor-Based System for Rapid Onboard Detection of Escherichia coli and Enterococcus spp. in Ballast Water" Microorganisms 13, no. 12: 2878. https://doi.org/10.3390/microorganisms13122878

APA Style

Agioti, S., Loulakis, E., Konstantinou, L., Varda, E., Inglezakis, A., Loizou, K., Apostolou, T., & Hadjilouka, A. (2025). Portable Lab for Shipping (POLS): A Biosensor-Based System for Rapid Onboard Detection of Escherichia coli and Enterococcus spp. in Ballast Water. Microorganisms, 13(12), 2878. https://doi.org/10.3390/microorganisms13122878

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