Next Article in Journal
The Overlooked Nucleocapsid Response: A Cohort Study of SARS-CoV-2 Vaccines in Brazil
Previous Article in Journal
PCR Detection, Genotyping, and Differentiation of Toxoplasma gondii from Hammondia hammondi Excreted in the Feces of Cats in Poland Between 2020 and 2024
Previous Article in Special Issue
Prevalence of T. rubrum and T. interdigitale Exhibiting High MICs to Terbinafine in Clinical Samples Analyzed in the Portuguese Mycology Reference Laboratory
 
 
Font Type:
Arial Georgia Verdana
Font Size:
Aa Aa Aa
Line Spacing:
Column Width:
Background:
Review

Is Pulmonary Mycoses Shadowed by Tuberculosis? Mandate to Hit the Bull’s Eye—An Indian Perspective

by
Jeevarahini Regupathy
1,
Priya Rajendran
1,*,
Vinod Kumar
2 and
Sivakumar Shanmugam
1
1
ICMR National Institute for Research in Tuberculosis, Chennai 600031, India
2
Institute of Thoracic Medicine, Madras Medical College, Chennai 600003, India
*
Author to whom correspondence should be addressed.
Pathogens 2025, 14(5), 435; https://doi.org/10.3390/pathogens14050435
Submission received: 18 March 2025 / Revised: 18 April 2025 / Accepted: 24 April 2025 / Published: 30 April 2025
(This article belongs to the Special Issue An Update on Fungal Infections)

Abstract

:
Tuberculosis (TB) poses serious challenges to healthcare personnel as it continues to be highly prevalent in a developing country like India. Several prominent strategies have been adopted to control this contagious infection, but the incidence rate remains high. Many studies have linked fungal infections to TB, apparently elevating concerns in the TB elimination program. Hence, it is essential to understand the mechanisms underlying TB co-infection and pulmonary mycoses to combat the problems caused by these diseases successfully. In addition, differential diagnosis of TB and fungal infections is equally essential to initiate appropriate treatment. This review attempts to describe misdiagnosis of TB and fungal disease and their relative coexistence in the context of the Indian perspective.

1. Introduction

Though preventable and curable, tuberculosis (TB) caused by Mycobacterium tuberculosis remains the second leading cause of mortality due to a single infectious agent, behind the COVID-19 infection in 2022, as stated by the WHO Global Tuberculosis Report [1]. Pulmonary TB (PTB) continues to be a serious concern in India and is consecutively listed in the top 20 TB high-burden countries despite strong measures taken by our health department [2]. Pathogenic fungi cause pulmonary mycoses via inhalation of spores, but a few fungi are endogenous, such as Candida, which disrupt the normal functioning of bronchial and lung tissues, resulting in pulmonary fungal disease. Furthermore, a rapid surge in fungal infection is recently attributed to other pre-existing clinical conditions such as TB, HIV/AIDS, and substantial use of immunosuppressive drugs. The compromised immune status in such circumstances allows opportunistic fungi to attack the host easily [3,4,5]. Pulmonary fungal infections are caused by Aspergillus, Cryptococcus, Pneumocystis [6], Candida [7], Mucor [8], and endemic fungi, which include Blastomyces, Coccidioides, and Histoplasma [9].
It has been reported that people recovering from TB are prone to pulmonary fungal infections and were mostly misdiagnosed as cases of relapsed PTB [10]. Another alarming fact is that there is an increase in misdiagnosis of patients with invasive fungal infections as TB patients and vice versa due to similar clinical presentations, leading to wrong or delayed treatment of the patients [11]. Therefore, studies on the simultaneous diagnosis of TB and pulmonary fungal infection and their coexistence are needed so that these patients may receive treatment with antituberculosis and/or antifungal agents promptly. To attain this, a differential diagnostic algorithm for TB and other fungal infections is required. While diagnostic methods for TB are well designed and implemented in routine programmatic setups, many labs still rely on classical diagnostic tests for fungal infections. However, these tests have very low sensitivity, with common methods involving microscopy and histopathology (79%), radiological analysis (50–90%), and culture (50–95%) [12,13]. In this review, we attempted to compile Indian studies over the past 10 years (2014–2024), focusing on the diagnosis of fungal infections with special reference to TB co-infection and misdiagnosis. We used a PubMed database for the collection of articles, using the search terms “Pulmonary infections, tuberculosis and India”, “Pulmonary mycoses, tuberculosis and India”, “Aspergillosis”, “Aspergillosis and India”, “Cryptococcosis”, “Cryptococcosis, tuberculosis and India”, “Candidiasis”, “Candidiasis, tuberculosis and India”, “Mucormycosis”, “Mucormycosis, tuberculosis and India”, “Endemic mycoses”, and “Endemic mycoses, tuberculosis and India.”

2. Pulmonary Fungal Infections

2.1. Pulmonary Aspergillosis

Pulmonary Aspergillosis can be broadly classified into three types based on clinical presentation [14].
  • Allergic Bronchopulmonary Aspergillosis;
  • Invasive Pulmonary Aspergillosis;
  • Chronic Pulmonary Aspergillosis.

2.1.1. Allergic Bronchopulmonary Aspergillosis (ABPA)

The common aetiological agent of ABPA is reported to be A. fumigatus [15] and is followed by other species such as A. flavus, A. niger, and A. oryzae [16]. The characteristic features of ABPA in conventional CT are bronchiectasis and mucoid opacities in the shape of toothpaste or a finger in a glove [17].

2.1.2. Invasive Pulmonary Aspergillosis (IPA)

Inhalation of Aspergillus conidia results in IPA, and the subspecies of A. fumigati (A. fumigatus, A. lentulus, and A. udagawae) are involved in this common form of aspergillosis [18]. Other significant species involved in the disease are A. flavus, A. nidulans, A. terreus, and A. niger. Extensive use of corticosteroids in non-neutropenic patients eventually results in invasive aspergillosis [19]. Symptoms of IPA patients include prolonged fever, nonproductive cough, chest pain, and hemoptysis, mimicking TB [20].

2.1.3. Chronic Pulmonary Aspergillosis (CPA)

The fungal pathogen causing CPA in most patients is A. fumigatus [21]. Incidentally, it is observed that one in five TB-negative patients after treatment with anti-tubercular therapy (ATT) might suffer from CPA [22]. A study in 2022 reported that the incidence of CPA emerging in PTB patients was estimated to be 363,601 cases and 42,766 deaths, 10.5% of total PTB deaths [23]. In addition, various studies and case reports elucidate the significance of CPA in PTB patients (Table 1). These findings indicate the importance of diagnosing CPA as part of the TB diagnostic algorithm in the program. Other predisposing factors for developing CPA into a serious illness are nontuberculous mycobacterial infections (NTM) and ABPA [24]. CPA is further subdivided into five types based on their colonization and disease development as follows:
  • Aspergillus nodules;
  • Simple Aspergilloma;
  • Chronic Cavitary Pulmonary Aspergillosis;
  • Subacute Invasive Pulmonary Aspergillosis;
  • Chronic Fibrosing Pulmonary Aspergillosis.

Aspergillus Nodules

Of the subtypes of CPA, Aspergillus nodules are relatively rare and are characterized by the CT finding of one or more nodules with or without cavities [32]. Minor or no symptoms represent this type of CPA and can only be diagnosed with histological evidence of necrosis, characterized by the presence of Aspergillus [33].

Aspergilloma

Simple Aspergilloma is indicated by a single fungal ball with radiological or microbiological evidence of Aspergillus species in immunocompetent individuals. Similar to Aspergillus nodules, this condition also accounts for minor or no symptoms [34].

Chronic Cavitary Pulmonary Aspergillosis (CCPA)

Complex Aspergilloma, an old surgical term now called CCPA [35], showcases parenchymal disease surrounded by a thick-walled cavity [36]. Contrary to Aspergillus nodules and Aspergilloma, the incidence of CCPA is high, and several reports have been documented for its role in previously treated TB patients. CT image portrays single or multiple cavities with characteristic residues in the lung [37].

Subacute Invasive Pulmonary Aspergillosis (SAIA)

Occasionally called semi-IPA and chronic necrotizing pulmonary aspergillosis [38], SAIA is similar to CCPA in radiology, with only the distinction of rapid progress under the former condition. Clinical conditions that make the host vulnerable to SAIA are diabetes, malnutrition, corticosteroid use, connective tissue disorders, HIV infection, and COPD [39].

Chronic Fibrosing Pulmonary Aspergillosis (CFPA)

The final stage of CPA is expressed as CFPA, which is more commonly reported along with CCPA than other types of CPA [40]. Since this condition overlaps with different forms of CPA, a distinctive diagnosis is impossible [24].

2.2. Pulmonary Cryptococcosis

Though 30 species of Cryptococcus are identified, C. neoformans and C. gattii are known to cause human infections [41]. Invasive fungal diseases in immunocompromised individuals are known to be caused by C. deneoformans [42], while C. gattii causes infection in immunocompetent individuals [43]. CT findings of pulmonary cryptococcosis (PC) include pulmonary nodules, patchy shadows, ground-glass attenuation, interstitial changes, and cavitation. In addition, the left lower lung seems to be involved most frequently in immunocompromised patients and is prone to being misdiagnosed as TB or a tumor [44,45,46]. Although not common, studies from various parts of India have been reporting the co-infection of TB with cryptococcosis, emphasizing routine monitoring (Table 2).

2.3. Pneumocystis Pneumonia

Pneumocystis pneumonia (PCP) is caused by an opportunistic pathogen named Pneumocystis jirovecii [52]. It is an ascomycete fungus that was previously categorized as a protozoan due to its similarity in morphology and drug susceptibility [53] but later as a fungus based on RNA analysis [54]. The clinical manifestations of PCP are illustrated by the subacute onset of dyspnoea, nonproductive cough, and low-grade fever [55]. Few studies and case reports have been recorded on pneumocystis pneumonia and TB as opportunistic infections in HIV populations across India, but none involved a co-infection or misdiagnosis [56,57]. This could be due to its coexistence in the HIV population, where the patient is diagnosed with one of the diseases, and by the time the other one is suspected, the patient dies [58].

2.4. Pulmonary Blastomycosis

The inhalation of Blastomyces spores results in pulmonary disease, and the species involved are Blastomyces dermatitidis, B. percursus, and B. emzantsi [59]. Although the lung is considered a common site of infection [60], the first human case of this infection was documented in the skin tissue [61]. This extrapulmonary spread could be attributed to a hematogenous initial lung infection [62]. The pulmonary form of the disease is expressed as pneumonia with an insidious course, while chest CT is non-specific, and infection limited to the lungs can mimic M. tuberculosis [63,64]. Blastomycosis misdiagnosed as TB was reported from Kerala, India, in 2019. The patient was on empirical ATT for nearly a year due to an indefinite diagnosis. History of his travels to Chicago, an endemic region for Blastomycosis, stirred suspicion and was he appropriately diagnosed [65].

2.5. Pulmonary Coccidioidomycosis

Arthroconidia of the fungi Coccidioides immitis and Coccidioides posadasii, usually present in the soil, are responsible for pulmonary coccidioidomycosis [66]. The disease is reported very rarely in places other than endemic areas [67] and is commonly found in association with human and animal middens [68]. Though endemic to deserts in the United States, as well as Central and South America, travel history to these countries has resulted in cases reported from other parts of the world [69]. It has been documented that about 19.5% of Coccidioidomycosis-confirmed cases involved TB as well [70]. One case report has been documented so far from India, where the diseased individual with a travel history presented with complaints of swelling over the neck and was clinically diagnosed as having TB. Further diagnosis by fungal stains, fungal culture, and serology confirmed Coccidioides, and a course of fluconazole was used for treatment [71].

2.6. Pulmonary Histoplasmosis

Histoplasma capsulatum, a dimorphic fungus, is responsible for establishing histoplasmosis infection [72]. Disease transmission is reported to be due to inhalation of spores in instances of soil disruption like cave excavation [73]. Chronic histoplasmosis is often characterized by nodule formation, and this clinical condition is termed chronic cavitary pulmonary histoplasmosis (CCPH) [74]. Major clinical features of TB, like radiological findings, pulmonary infiltrates, hilar lymphadenopathy, opacities of the lung, and pleural effusion, are also reported in histoplasmosis [75,76]. Instances of histoplasmosis misdiagnosed as TB across India have been recorded in Table 3.

2.7. Pulmonary Candidiasis

Opportunistic candidal infection is caused frequently by Candida albicans, although the incidence of disease by other members of the same genus is also increasing rapidly [81]. Candida, a commensal of the gut microbiome, shapes itself into a pathogen based on antibiotics, with severe lapse leading to compromise of the gut integrity, host immune dysfunction, use of central venous catheter, surgery, etc. [82]. Diagnosing pulmonary candidiasis is tedious, as no specific clinical and radiographical presentations exist. Hence, pulmonary parenchymal invasion through histopathologic examination can be a more reliable method for diagnosis of patients with deep-rooted invasion, though such instances occur rarely [83]. A systematic review and meta-analysis of different cross-sectional studies by Fishani et al. has established a significantly higher incidence of co-infection of candidiasis among PTB patients in Asia and Africa [84]. Significant correlations between HIV, TB, and candidiasis that were documented from India are included in Table 4.

2.8. Pulmonary Mucormycosis

The order Mucorales includes different genera, such as Rhizopus, Mucor, Lichtheimia, Rhizomucor, Cunninghamella, and Apophysomyces spp., and are involved in establishing the invasive fungal infection called mucormycosis [87]. Diabetes mellitus, solid organ transplant, chronic renal failure, hematological malignancy, acute myeloid leukemia, and TB are the predisposing risk factors for mucormycosis [88]. Clinical features include ground-glass lesions, reverse halo signs, necrosis, lobar and segmental consolidation, and single or multiple lesions [89]. Studies and case reports on mucormycosis documented across India have been described in Table 5.

3. Diagnosis

The Fungal Priority Pathogen List released by WHO in 2022 underscores the need for quick measures to prevent, diagnose, and appropriately treat fungal pathogens [93]. Some of the proven diagnostic tools available for detecting pulmonary mycoses can be broadly categorized into histopathological and culture methods, while radiological, immunological, and molecular techniques are considered for probable diagnosis [94]. Figure 1 shows diagnostic techniques for suspected pulmonary fungal infections in presumed TB patients who have been microbiologically determined to be non-TB patients, with confirmed possibility of bacterial and viral pneumonias ruled out.

3.1. Direct Microscopy and Histopathological Examination

Histopathological examination can be carried out by staining methods such as Hematoxylin and Eosin staining (HE), periodic acid Schiff staining (PAS), or Gomori’s methenamine silver staining (GMS) [95]. An evaluation study carried out to detect fungal infections in post-COVID-19 patients by Baxi et al. from Gujarat compared the efficacies of histopathological, culture, and KOH wet mount methods, of which the histopathological diagnosis by HE staining was found to be the most sensitive and rapid technique for mycological identification [96]. Another retrospective study from a tertiary care hospital in Jammu and Kashmir stressed the potential misdiagnosis in the microbiological examination, as it cannot differentiate between pathogenic fungi and contamination. Furthermore, they suggested that histopathology could be more reliable for fungal diagnosis as it can distinguish between contamination, colonization, or actual infection [97]. Seth et al. from AIIMS, New Delhi, reviewed the diagnostic progress of fungal infections and concluded that diagnostic tools need to be validated in younger children. They also admitted that histopathological examination remains the gold standard, while galactomannan assay or PCR techniques can be employed for pediatric populations [98].

3.2. Radiology

Radiological diagnosis includes the utility of X-rays, CT scans, radiofrequency (MRI), and sound waves (ultrasound) for infection identification [99]. High-Resolution Computed Tomography (HRCT), though insensitive, can be utilized as a screening tool initially in highly suspected cases, and an empirical therapy could be started when microbiological diagnosis takes up more time [100]. It has been documented that PJP by Pneumocystis in HIV/AIDS patients can be suspected with radiological evidence. Similarly, lung consolidation, nodules, and masses can be used to suspect cryptococcosis and blastomycosis [101]. Garg et al. from PGIMER, Chandigarh, studied the imaging spectrum of CPA and summarized that a patient’s immune status plays a significant role in radiological diagnosis, as clinical presentation is often not specific and leads to misdiagnosis [39].

3.3. Culture

Sabouraud’s Dextrose agar, Potato Dextrose agar with certain antibiotics, or Brain Heart Infusion agar enriched with blood is generally used for growing fungal pathogens [102]. The culture of clinical specimens is considered more efficient in determining the specific fungal etiological agent if the sample is positive, and susceptibility patterns can be determined. When culture is challenging to identify using tease mounts, the slide culture technique has to be used alternately. Furthermore, the appropriate specimens from the lower respiratory tract for fungal diagnosis, as stated by the ICMR SOP for Fungal Identification and Detection of Antifungal Resistance, are sputum, bronchoalveolar lavage (BAL), and lung biopsy. The collection of these specimens should be carried out in a defined manner for accurate results. Sputum should be collected in the early morning after mouth rinsing and brushing, with an adequate volume range is 5–10 mL. BAL samples must be collected in a sterile container using fiberoptic bronchoscopes. Lung biopsy samples can be taken through fluoroscopy-guided trans-thoracic needle aspiration or open lung biopsy. However, despite open lung biopsy being the best method, it has high safety concerns and needs a highly trained professional for specimen collection [103].

3.4. Serology

Serum galactomannan (GM) testing can be recommended for IPA suspects initially if there is still high clinical suspicion for IPA, and they can be subjected to tissue biopsy only when a GM negative result is obtained. Consequently, false-positive serum GM can be avoided with a BAL GM confirmation [104]. Another biomarker, β-D-glucan, is found in the cell wall of most fungi, with the exceptions of Cryptococcus neoformans and Mucormycetes [105]. However, in the case of ABPA, Aspergillus-specific IgG has proven to have higher sensitivity and specificity than IgE [106], GM, and B, D-glucan [107]. Other serological assays with significant diagnostic ability for fungal detection include immunodiffusion (ID), counter-immunoelectrophoresis (CIE), enzyme-linked immunosorbent assays (ELISAs), complement fixation (CF), radio-immunosorbent assays (RIAs), and agglutination assays [108].

3.5. Molecular Diagnosis

Gudisa et al. from PGIMER, Chandigarh, reviewed the evolution of molecular diagnostics for fungal infection over the years and elucidated the significance of RT-PCR, the role of Sanger sequencing, and next-generation sequencing in the detection and speciation of fungal pathogens [109]. The review article described the utility of different molecular methods, including PCR, loop-mediated isothermal amplification, nucleic acid sequence-based amplification, and rolling circle amplification in the diagnosis of fungal infections. Although PCR has been widely used, the role of other molecular techniques in diagnosing pulmonary disease has been less explored and needs further research in India. A study from North India by Srinivas et al. from Maharashtra evaluated GenoSen’s panfungal RT PCR kit. It depicted the utility of panfungal PCR in a resource-limited country like India [110].

3.5.1. Metagenomic Next-Generation Sequencing (mNGS)

Molecular methods such as mNGS are fast-growing diagnostic techniques with the subsequent advantage of rapid and broad detection [111]. The technique will greatly help in differential diagnosis but requires strong validation and standardization for better utility in metagenomic next-generation sequencing [112]. Different studies have demonstrated the efficiency of the NGS technique in detecting fungal pathogens such as Pneumocystis, Histoplasma, Aspergillus, and Candida [113].

3.5.2. Matrix-Assisted Laser Desorption–Ionization Time of Flight Mass Spectrometry (MALDI-TOF MS)

Ghosh et al. tried to evaluate the utility of MALDI-TOF MS in diagnosing bloodstream yeasts. They also added the need for extensive studies to be carried out to validate the potential of MALDI-TOF as a diagnostic technique for effective patient care and management [114]. Paul et al. standardized the MALDI-TOF method with different protocols and concluded it could be used for routine diagnosis of pathogenic molds [115].

3.6. Limitations of Fungal Diagnosis

For most of the fungal infections, conventional methods (microscopy, histopathology, and culture) remain the gold standard of diagnosis, but the diagnostic yield of culture is very low, and the time to positivity is higher. Furthermore, histopathology requires highly trained personnel to identify the pathogen accurately. Serological assays are promising, but a major setback is their cross-reactivity and lower sensitivity. There have been significant advances in the development of PCR assays for fungal diagnosis in recent years, and their utility has been approved by the European Organization for Research and Treatment of Cancer (EORTC). But one of the drawbacks of fungal PCR is its inability to distinguish airway colonization from an infection [7].

4. Key Points

  • Clinical suspicion of fungal pathogens in ATT non-responders should be considered before treating them further.
  • Early differentiation of active PTB, PTLD, and PTB from fungal co-infection in settings with a high TB burden is the need of the hour.
  • A broader screening strategy at the investigation stage itself should be proposed.
  • Microbiological confirmation with an inclusion of simultaneous fungal and TB diagnostic methods for presumptive PTB patients with abnormal chest X-ray will facilitate appropriate diagnosis and treatment.

5. Conclusions

In this review article, we aimed to elucidate the significance of pulmonary mycoses being misdiagnosed or ignored in the context of TB. It is prominent that the incidence of misdiagnosis or no diagnosis of pulmonary mycosis among TB patients is common. Although some studies have documented this scenario, more instances of this could be anticipated without being reported. Hence, clinical suspicion of pulmonary mycoses among TB patients and ATT non-responders could help in timely prognosis and patient care. Further, it emphasizes the urgent necessity to develop differential diagnostics for TB and pulmonary mycoses, as most of the available tools have been exposed to either cross-reactivity or low specificity.

Author Contributions

J.R.: Data generation, Data analysis, Writing—original draft preparation; P.R.: Idea and conceptualization, Data analysis, Reviewing and editing; V.K.: Reviewing and editing; S.S.: Reviewing and editing. All authors have read and agreed to the published version of the manuscript.

Funding

This research received no external funding.

Conflicts of Interest

The authors declare no conflicts of interest.

References

  1. WHO. Global Tuberculosis Report; WHO: Geneva, Switzerland, 2023.
  2. Singh, J.; Dinkar, A.; Gupta, P. Uncommon manifestations in tuberculosis: An expanding clinical spectrum from North India. Int. J. Mycobacteriol. 2022, 11, 30–37. [Google Scholar] [CrossRef]
  3. Lopes, J.P.; Lionakis, M.S. Pathogenesis and virulence of Candida albicans. Virulence 2022, 13, 89–121. [Google Scholar] [CrossRef]
  4. Bitew, A.; Bati, S. Profiling of potential pulmonary fungal pathogens and the prevalence of the association between pulmonary tuberculosis and potential fungal pathogens in presumptive tuberculosis patients referred to Saint Peter’s Specialized Tuberculosis Referral Hospital, Addis Ababa, Ethiopia. SAGE Open Med. 2021, 9, 20503121211056164. [Google Scholar]
  5. Muni, S.; Rajpal, K.; Kumar, R.; Kumari, R.; Sinha, R.; Kumar, S.; Kumari, N. Identification of fungal isolates in patients with pulmonary tuberculosis treated at a tertiary care hospital. Cureus 2023, 15, e37664. [Google Scholar] [CrossRef] [PubMed]
  6. Li, Z.; Lu, G.; Meng, G. Pathogenic fungal infection in the lung. Front Immunol. 2019, 10, 1524. [Google Scholar] [CrossRef] [PubMed]
  7. Kelly, B.T.; Pennington, K.M.; Limper, A.H. Advances in the diagnosis of fungal pneumonias. Expert Rev. Respir. Med. 2020, 14, 703–714. [Google Scholar] [CrossRef]
  8. Yan, X.; Zong, F.; Kong, H.; Wang, Y.; Zhao, X.; Liu, W.; Wang, Z.; Xie, W. Pulmonary Fungal Diseases in Immunocompetent Hosts: A Single-Center Retrospective Analysis of 35 Subjects. Mycopathologia 2016, 181, 513–521. [Google Scholar] [CrossRef]
  9. Campbell, A.P.; Qiu, L.; Dillman, J.R.; Trout, A.T.; Szabo, S.; Lopez-Nunez, O.F.; Pugmire, B.S.; Schapiro, A.H. Endemic mycoses in children in North America: A review of radiologic findings. Pediatr Radiol. 2023, 53, 984–1004. [Google Scholar] [CrossRef]
  10. Seo, W.; Kim, H.W.; Kim, J.S.; Min, J. Long term management of people with post-tuberculosis lung disease. Korean J. Intern. Med. 2024, 39, 7–24. [Google Scholar] [CrossRef]
  11. Ekeng, B.E.; Davies, A.A.; Osaigbovo, I.I.; Warris, A.; Oladele, R.O.; Denning, D.W. Pulmonary and extrapulmonary manifestations of fungal infections misdiagnosed as tuberculosis: The need for prompt diagnosis and management. J. Fungi 2022, 8, 460. [Google Scholar] [CrossRef]
  12. Lewis, R.E.; Stanzani, M.; Morana, G.; Sassi, C. Radiology-based diagnosis of fungal pulmonary infections in high-risk hematology patients: Are we making progress? Curr. Opin. Infect. Dis. 2023, 36, 250–256. [Google Scholar] [CrossRef] [PubMed]
  13. Lai, J.; Wang, B.; Petrik, M.; Beziere, N.; Hammoud, D.A. Radiotracer Development for Fungal-Specific Imaging: Past, Present, and Future. J. Infect. Dis. 2023, 228 (Suppl. 4), S259–S269. [Google Scholar] [CrossRef]
  14. Kanj, A.; Abdallah, N.; Soubani, A.O. The spectrum of pulmonary aspergillosis. Respir. Med. 2018, 141, 121–131. [Google Scholar] [CrossRef]
  15. Agarwal, R.; Sehgal, I.S.; Dhooria, S.; Muthu, V.; Prasad, K.T.; Bal, A.; Aggarwal, A.N.; Chakrabarti, A. Allergic bronchopulmonary aspergillosis. Indian J. Med. Res. 2020, 151, 529–549. [Google Scholar] [CrossRef] [PubMed]
  16. Ueki, S.; Hebisawa, A.; Kitani, M.; Asano, K.; Neves, J.S. Allergic Bronchopulmonary Aspergillosis-A Luminal Hypereosinophilic Disease With Extracellular Trap Cell Death. Front. Immunol. 2018, 9, 2346. [Google Scholar] [CrossRef] [PubMed]
  17. Grenier, P.A.; Brun, A.L.; Longchampt, E.; Lipski, M.; Mellot, F.; Catherinot, E. Primary immunodeficiency diseases of adults: A review of pulmonary complication imaging findings. Eur. Radiol. 2023, 34, 4142–4154. [Google Scholar] [CrossRef]
  18. Khan, S.; Bilal, H.; Shafiq, M.; Zhang, D.; Awais, M.; Chen, C.; Khan, M.N.; Wang, Q.; Cai, L.; Islam, R.; et al. Distribution of Aspergillus species and risk factors for aspergillosis in mainland China: A systematic review. Ther. Adv. Infect. Dis. 2024, 11, 20499361241252536. [Google Scholar] [CrossRef]
  19. Heylen, J.; Vanbiervliet, Y.; Maertens, J.; Rijnders, B.; Wauters, J. Acute invasive pulmonary aspergillosis: Clinical presentation and treatment. Semin. Respir. Crit. Care Med. 2024, 45, 69–87. [Google Scholar] [CrossRef]
  20. Kim, S.-H.; Kim, M.Y.; Hong, S.I.; Jung, J.; Lee, H.J.; Yun, S.-C.; Lee, S.-O.; Choi, S.-H.; Kim, Y.S.; Woo, J.H. Invasive Pulmonary Aspergillosis-mimicking Tuberculosis. Clin. Infect. Dis. 2015, 61, 9–17. [Google Scholar] [CrossRef]
  21. van der Torre, M.H.; Shen, H.; Rautemaa-Richardson, R.; Richardson, M.D.; Novak-Frazer, L. Molecular Epidemiology of Aspergillus fumigatus in Chronic Pulmonary Aspergillosis Patients. J. Fungi 2021, 7, 152. [Google Scholar] [CrossRef]
  22. Kosmidis, C. Special issue: Chronic pulmonary aspergillosis. J. Fungi 2022, 8, 714. [Google Scholar] [CrossRef]
  23. Denning, D.W.; Cole, D.C.; Ray, A. New estimation of the prevalence of chronic pulmonary aspergillosis (CPA) related to pulmonary TB—A revised burden for India. IJID Reg. 2022, 6, 7–14. [Google Scholar] [CrossRef] [PubMed]
  24. Zarif, A.; Thomas, A.; Vayro, A. Chronic pulmonary aspergillosis: A brief review. Yale J. Biol. Med. 2021, 94, 673–679. [Google Scholar]
  25. Jha, D.; Kumar, U.; Meena, V.P.; Sethi, P.; Singh, A.; Nischal, N.; Jorwal, P.; Vyas, S.; Singh, G.; Xess, I.; et al. Chronic pulmonary aspergillosis incidence in newly detected pulmonary tuberculosis cases during follow-up. Mycoses 2024, 67, e13747. [Google Scholar] [CrossRef] [PubMed]
  26. Rajpurohit, R.; Wagh, P.; Heda, M.; Dubey, G.; Gujar, P.S. Prevalence of chronic pulmonary aspergillosis in fibrocavitary pulmonary tuberculosis patients. J. Fam. Med. Prim. Care 2023, 12, 106–110. [Google Scholar] [CrossRef]
  27. Bharath, B.; Ray, A.; Jorwal, P.; Vyas, S.; Soneja, M.; Biswas, A.; Sinha, S.; Khan, M.A. Diagnostic utility of chest computerized tomography in the diagnosis of recurrence among sputum scarce and sputum negative previously treated pulmonary tuberculosis suspects. Lung India 2022, 39, 145–151. [Google Scholar] [CrossRef]
  28. Sehgal, I.S.; Dhooria, S.; Rudramurthy, S.M.; Prasad, K.T.; Muthu, V.; Aggarwal, A.N.; Garg, M.; Rastogi, P.; Agarwal, R. Role of C-Reactive Protein and Erythrocyte Sedimentation Rate in the Diagnosis and Monitoring of Treatment Response in Treatment Naïve Subjects with Chronic Pulmonary Aspergillosis. Mycopathologia 2023, 188, 705–711. [Google Scholar] [CrossRef] [PubMed]
  29. Lahiri, R.; Jhalani, I.; Kumar, A.; Goswami, A.G. Successful management of delayed postoperative lung collapse secondary to spillage of aspergilloma. BMJ Case Rep. 2023, 16, e254621. [Google Scholar] [CrossRef] [PubMed]
  30. Gandotra, A.; Mehtani, R.; Premkumar, M.; Duseja, A.; De, A.; Mallik, N.; Durgadevi, S.; Das, A.; Kalra, N. Invasive Pulmonary Aspergillosis and Tuberculosis Complicated by Hemophagocytic Lymphohistiocytosis—Sequelae of COVID-19 in a Liver Transplant Recipient. J. Clin. Exp. Hepatol. 2022, 12, 1007–1011. [Google Scholar] [CrossRef]
  31. Chaurasia, S.; Thimmappa, M.; Chowdhury, S. Case Report: Chronic Cavitatory Pulmonary Aspergillosis after COVID-19. Am. J. Trop. Med. Hyg. 2021, 106, 105–107. [Google Scholar] [CrossRef]
  32. Dong, S.; Wang, F.; Jin, H.; Dai, X. Five cases of pulmonary Aspergillus nodules diagnosed at surgery and by pathology in immunocompetent patients, with a literature review. Ther. Adv. Rare Dis. 2024, 5, 26330040241252450. [Google Scholar] [CrossRef]
  33. Zhong, H.; Wang, Y.; Gu, Y.; Ni, Y.; Wang, Y.; Shen, K.; Shi, Y.; Su, X. Clinical features, diagnostic test performance, and prognosis in different subtypes of chronic pulmonary aspergillosis. Front. Med. 2022, 9, 811807. [Google Scholar] [CrossRef] [PubMed]
  34. Chakraborty, R.K.; Gilotra, T.S.; Tobin, E.H.; Baradhi, K.M. Aspergilloma; StatPearls Pulishing: Treasure Island, FL, USA, 2024. [Google Scholar]
  35. Lamoth, F.; Calandra, T. Pulmonary aspergillosis: Diagnosis and treatment. Eur. Respir. Rev. 2022, 31, 220114. [Google Scholar] [CrossRef]
  36. Pekçolaklar, A.; Çıtak, N.; Aksoy, Y.; Erdoğu, V.; Metin, M. Is there any change in disease presentation and surgical outcomes in patients with pulmonary aspergilloma? An evaluation of the time trend. Turk. J. Thorac. Cardiovasc. Surg. 2022, 30, 241–249. [Google Scholar] [CrossRef]
  37. Uzair, A.; Waseem, M.; Bhatti, N.I.; Toor, Z.; Ishaq, A.; Ahmad, O. Chronic cavitary pulmonary aspergillosis as a sequela of pulmonary tuberculosis: A case report from Pakistan. SAGE Open Med Case Rep. 2024, 12, 2050313X241251777. [Google Scholar] [CrossRef] [PubMed]
  38. Izumikawa, K.; Tashiro, T.; Tashiro, M.; Takazono, T.; Kosai, K.; Morinaga, Y.; Kurihara, S.; Nakamura, S.; Imamura, Y.; Miyazaki, T.; et al. Pathogenesis and clinical features of chronic pulmonary aspergillosis—Is it possible to distinguish CNPA and CCPA clinically? J. Infect. Chemother. 2014, 20, 208–212. [Google Scholar] [CrossRef]
  39. Garg, M.; Bhatia, H.; Chandra, T.; Debi, U.; Sehgal, I.S.; Prabhakar, N.; Sandhu, M.S.; Agarwal, R. Imaging spectrum in chronic pulmonary aspergillosis. Am. J. Trop. Med. Hyg. 2023, 108, 15–21. [Google Scholar] [CrossRef] [PubMed]
  40. Huang, S.-F.; Huang, C.-C.; Chou, K.-T.; Chan, Y.-J.; Yang, Y.-Y.; Wang, F.-D. Chronic Pulmonary Aspergillosis: Disease Severity Using Image Analysis and Correlation with Systemic Proinflammation and Predictors of Clinical Outcome. J. Fungi 2021, 7, 842. [Google Scholar] [CrossRef]
  41. Wang, T.; Liu, M.; Zhang, F. Clinical diagnosis, treatment, and laboratory detection of 50 cases of pulmonary cryptococcosis. Comput. Math. Methods Med. 2022, 2022, 7981472. [Google Scholar] [CrossRef]
  42. Kidd, S.E.; Abdolrasouli, A.; Hagen, F. Fungal nomenclature: Managing change is the name of the game. Open Forum Infect Dis. 2023, 10, ofac559. [Google Scholar] [CrossRef]
  43. Kwon-Chung, K.J.; Fraser, J.A.; Doering, T.L.; Wang, Z.; Janbon, G.; Idnurm, A.; Bahn, Y.-S. Cryptococcus neoformans and Cryptococcus gattii, the etiologic agents of cryptococcosis. Cold Spring Harb. Perspect. Med. 2014, 4, a019760. [Google Scholar] [CrossRef]
  44. Hu, Y.; Ren, S.-Y.; Xiao, P.; Yu, F.-L.; Liu, W.-L. The clinical and radiological characteristics of pulmonary cryptococcosis in immunocompetent and immunocompromised patients. BMC Pulm. Med. 2021, 21, 262. [Google Scholar] [CrossRef]
  45. Xiong, C.; Lu, J.; Chen, T.; Xu, R. Comparison of the clinical manifestations and chest CT findings of pulmonary cryptococcosis in immunocompetent and immunocompromised patients: A systematic review and meta-analysis. BMC Pulm. Med. 2022, 22, 415. [Google Scholar] [CrossRef] [PubMed]
  46. Qu, J.; Zhang, X.; Lu, Y.; Liu, X.; Lv, X. Clinical analysis in immunocompetent and immunocompromised patients with pulmonary cryptococcosis in western China. Sci. Rep. 2020, 10, 9387. [Google Scholar] [CrossRef] [PubMed]
  47. Meena, P.; Gupta, A.; Gaur, L.; Shingada, A.; Gupta, P.; Bhargava, V.; Rana, D.S. Cryptococcosis masquerading as disseminated tuberculosis in a patient on chronic hemodialysis. Saudi J. Kidney Dis. Transplant. 2019, 30, 1179–1183. [Google Scholar] [CrossRef]
  48. Ismail, J.; Chidambaram, M.; Sankar, J.; Agarwal, S.; Lodha, R. Disseminated cryptococcosis presenting as miliary lung shadows in an immunocompetent child. J. Trop. Pediatr. 2018, 64, 434–437. [Google Scholar] [CrossRef] [PubMed]
  49. Jain, S.; Mahajan, V.; Kumar, A. Unusual case of coexistent pulmonary cryptococcosis and tuberculosis in an immuno-competent host. Indian J. Tuberc. 2017, 64, 228–231. [Google Scholar] [CrossRef]
  50. Pawar, S.; Ganakumar, V.; Jha, S.; Ragesh, R.; Ray, A.; Kakkar, A.; Sharma, M.C.; Sharma, S.K. Pulmonary cryptococcoma masquerading as lung cancer. J. Assoc. Physicians India 2016, 64, 66–68. [Google Scholar]
  51. Ranjan, P.; Jana, M.; Krishnan, S.; Nath, D.; Sood, R. Disseminated cryptococcosis with adrenal and lung involvement in an immunocompetent patient. J. Clin. Diagn. Res. 2015, 9, OD04-5. [Google Scholar] [CrossRef]
  52. Rafat, Z.; Ashrafi, K.; Hashemi, S.J.; Sasani, E.; Naserani, A.; Sarvestani, H.K.; Hashemi, F. The mycological and molecular study of Pneumocystis jiroveci pneumonia among HIV and non-HIV immunocompromised patients hospitalized in pulmonary units in Guilan, Northern Iran. Iran. J. Microbiol. 2021, 13, 518–524. [Google Scholar] [CrossRef]
  53. Lee, H.-Y.; Lu, C.-Y.; Lee, P.-I.; Chen, J.-M.; Huang, L.-M.; Chang, L.-Y. Pneumocystis jiroveci pneumonia in Taiwan from 2014 to 2017: Clinical manifestations and outcomes between pediatric and adult patients. J. Microbiol. Immunol. Infect. 2019, 52, 983–990. [Google Scholar] [CrossRef]
  54. Apostolopoulou, A.; Fishman, J.A. The Pathogenesis and Diagnosis of Pneumocystis jiroveci Pneumonia. J. Fungi 2022, 8, 1167. [Google Scholar] [CrossRef]
  55. Bateman, M.; Oladele, R.; Kolls, J.K. Diagnosing Pneumocystis jirovecii pneumonia: A review of current methods and novel approaches. Med. Mycol. 2020, 58, 1015–1028. [Google Scholar] [CrossRef] [PubMed]
  56. Ramesh, K.; Gandhi, S.; Rao, V. Clinical profile of human immunodeficiency virus patients with opportunistic infections: A descriptive case series study. Int. J. Appl. Basic Med. Res. 2015, 5, 119–123. [Google Scholar] [CrossRef] [PubMed]
  57. Patil, V.C.; Patil, H.V. Clinical manifestations and outcome of patients with human immunodeficiency virus infection at tertiary care teaching hospital. Indian J. Sex. Transm. Dis. AIDS 2016, 37, 38–45. [Google Scholar] [CrossRef] [PubMed]
  58. Pandey, S.; Ghosh, S.; Halder, P.; Pal, D.; Modak, D.C.; Guha, S.K. Pulmonary tuberculosis and pneumocystis jirovecii concurrent pneumonia in HIV infected patients at a resource limited setting in Eastern India: A case series. Indian J. Tuberc. 2020, 67, 378–382. [Google Scholar] [CrossRef]
  59. Bongomin, F.; Ekeng, B.E.; Kibone, W.; Nsenga, L.; Olum, R.; Itam-Eyo, A.; Kuate, M.P.N.; Pebolo, F.P.; Davies, A.A.; Manga, M.; et al. Invasive fungal diseases in africa: A critical literature review. J. Fungi 2022, 8, 1236. [Google Scholar] [CrossRef]
  60. Goico, A.; Henao, J.; Tejada, K. Disseminated blastomycosis in a 36-year-old immunocompetent male from Chicago, IL. Oxf. Med. Case Rep. 2018, 2018, omy071. [Google Scholar] [CrossRef]
  61. Maphanga, T.G.; Birkhead, M.; Muñoz, J.F.; Allam, M.; Zulu, T.G.; Cuomo, C.A.; Schwartz, I.S.; Ismail, A.; Naicker, S.D.; Mpembe, R.S.; et al. Human Blastomycosis in South Africa Caused by Blastomyces percursus and Blastomyces emzantsi sp. nov., 1967 to 2014. J. Clin. Microbiol 2020, 58, e01661-19. [Google Scholar] [CrossRef]
  62. Bongomin, F.; Adetona Fayemiwo, S. Epidemiology of fungal diseases in Africa: A review of diagnostic drivers. Curr. Med. Mycol. 2021, 7, 63–70. [Google Scholar] [CrossRef]
  63. Abdallah, F.C.B.; Bachouch, I.; Belloumi, N.; Kacem, M.; Mlika, M.; Mezni, F.E.; Fenniche, S. Pulmonary blastomycosis. Pan Afr. Med. J. 2020, 36, 220. [Google Scholar] [CrossRef]
  64. Wang, N.; Luo, Z.; Deng, S.; Li, Q. A young male with chronic nonproductive cough diagnosed with blastomycosis in China: A case report. BMC Pulm. Med. 2020, 20, 189. [Google Scholar] [CrossRef] [PubMed]
  65. Kumar, A.; Kunoor, A.; Eapen, M.; Singh, P.K.; Chowdhary, A. Blastomycosis misdiagnosed as tuberculosis, india. Emerg. Infect. Dis. 2019, 25, 1776–1777. [Google Scholar] [CrossRef] [PubMed]
  66. Cordeiro, R.; Moura, S.; Castelo-Branco, D.; Rocha, M.F.; Lima-Neto, R.; Sidrim, J.J. Coccidioidomycosis in brazil: Historical challenges of a neglected disease. J. Fungi 2021, 7, 85. [Google Scholar] [CrossRef]
  67. Crum, N.F. Coccidioidomycosis: A contemporary review. Infect. Dis. Ther. 2022, 11, 713–742. [Google Scholar] [CrossRef] [PubMed]
  68. Taylor, J.W.; Barker, B.M. The endozoan, small-mammal reservoir hypothesis and the life cycle of Coccidioides species. Med. Mycol. 2019, 57 (Suppl. 1), S16–S20. [Google Scholar] [CrossRef]
  69. Johnson, R.H.; Sharma, R.; Kuran, R.; Fong, I.; Heidari, A. Coccidioidomycosis: A review. J. Investig. Med. 2021, 69, 316–323. [Google Scholar] [CrossRef]
  70. Scott, A.M.; Lim, J.R.; Randhawa, R.; Lee, J.; Yaddanapudi, K.; Rabe, B.; Malo, J. Examining Miliary Disease Etiology in a Coccidioides-Endemic Center: A Retrospective Cohort Study. J. Fungi 2023, 10, 29. [Google Scholar] [CrossRef]
  71. Sri, K.; Vaithy, A.; Kathirvelu, S.; Srinivasan, S. Coccidioidomycosis lymphadenopathy: An unusual presentation. BMJ Case Rep. 2023, 16, e253740. [Google Scholar] [CrossRef]
  72. Caceres, D.H.; Valdes, A. Histoplasmosis and Tuberculosis Co-Occurrence in People with Advanced HIV. J. Fungi 2019, 5, 73. [Google Scholar] [CrossRef]
  73. Kuate, M.P.N.; Ekeng, B.E.; Kwizera, R.; Mandengue, C.; Bongomin, F. Histoplasmosis overlapping with HIV and tuberculosis in sub-Saharan Africa: Challenges and research priorities. Ther. Adv. Infect. Dis. 2021, 8, 20499361211008676. [Google Scholar] [CrossRef] [PubMed]
  74. Baker, J.; Kosmidis, C.; Rozaliyani, A.; Wahyuningsih, R.; Denning, D.W. Chronic Pulmonary Histoplasmosis-A Scoping Literature Review. Open Forum Infect. Dis. 2020, 7, ofaa119. [Google Scholar] [CrossRef] [PubMed]
  75. Nacher, M.; Alsibai, K.D.; Epelboin, L.; Abboud, P.; About, F.; Demar, M.; Djossou, F.; Blaizot, R.; Douine, M.; Sabbah, N.; et al. A Simple Predictive Score to Distinguish between Disseminated Histoplasmosis and Tuberculosis in Patients with HIV. J. Fungi 2021, 8, 16. [Google Scholar] [CrossRef]
  76. Ekeng, B.E.; Oladele, R.O.; Emanghe, U.E.; Ochang, E.A.; Mirabeau, T.Y. Prevalence of Histoplasmosis and Molecular Characterization of Histoplasma species in Patients with Presumptive Pulmonary Tuberculosis in Calabar, Nigeria. Open Forum Infect. Dis. 2022, 9, ofac368. [Google Scholar] [CrossRef] [PubMed]
  77. Agarwal, M.; Shadrach, B.J. Acute pulmonary histoplasmosis masquerading as miliary tuberculosis in a non-endemic region. Adv. Respir. Med. 2021, 89, 464–465. [Google Scholar] [CrossRef]
  78. Anot, K.; Sharma, S.; Gupta, M.; Kaur, D. Disseminated histoplasmosis and tuberculosis: Dual infection in a non-endemic region. BMJ Case Rep. 2020, 13, e235531. [Google Scholar] [CrossRef]
  79. Dutta, V.; Chopra, M.; Kovilapu, U.B.; Gahlot, G. Solitary pulmonary nodule: An interesting clinical mimicry of pulmonary tuberculosis. Med. J. Armed Forces India 2018, 75, 115–118. [Google Scholar] [CrossRef]
  80. Ramesh, V.; Narreddy, S.; Gowrishankar, S.; Barigala, R.; Nanda, S. A challenging case of pyrexia of unknown origin: Adrenal histoplasmosis mimicking tuberculosis in a patient with chronic hepatitis C. Trop. Dr. 2018, 51, 621–623. [Google Scholar] [CrossRef]
  81. Astekar, M.; Bhatiya, P.S.; Sowmya, G. Prevalence and characterization of opportunistic candidal infections among patients with pulmonary tuberculosis. J. Oral Maxillofac. Pathol. 2016, 20, 183–189. [Google Scholar] [CrossRef]
  82. Azim, A.; Ahmed, A. Diagnosis and management of invasive fungal diseases in non-neutropenic ICU patients, with focus on candidiasis and aspergillosis: A comprehensive review. Front. Cell. Infect. Microbiol. 2024, 14, 1256158. [Google Scholar] [CrossRef]
  83. Shweihat, Y.; Perry, J.; Shah, D. Isolated Candida infection of the lung. Respir. Med. Case Rep. 2015, 16, 18–19. [Google Scholar] [CrossRef]
  84. Hadadi-Fishani, M.; Shakerimoghaddam, A.; Khaledi, A. Candida coinfection among patients with pulmonary tuberculosis in Asia and Africa; A systematic review and meta-analysis of cross-sectional studies. Microb. Pathog. 2020, 139, 103898. [Google Scholar] [CrossRef]
  85. Khanduri, R.; Khanduri, S.; Kumar, S.; Saini, A.; Kotwal, A. Drug-resistant tuberculosis coexisting with invasive candidiasis in an immunocompetent 30-year-old woman: A case report. Indian J. Tuberc. 2017, 64, 232–234. [Google Scholar] [CrossRef]
  86. Kumar, A.; Agarwal, C.; Hooda, A.K.; Ojha, A.; Dhillon, M.; Kumar, K.V.S. Profile of infections in renal transplant recipients from India. J. Fam. Med. Prim. Care 2016, 5, 611–614. [Google Scholar] [CrossRef]
  87. Bao, J.; Liu, C.; Dong, Y.; Xu, Y.; Wang, Z.; Sun, K.; Xi, W.; Wang, K.; Gong, P.; Gao, Z. Clinical Manifestations of Pulmonary Mucormycosis in Recipients of Allogeneic Hematopoietic Stem Cell Transplantation: A 21-Case Series Report and Literature Review. Can. Respir. J. 2022, 2022, 1237125. [Google Scholar] [CrossRef] [PubMed]
  88. Prakash, H.; Chakrabarti, A. Global epidemiology of mucormycosis. J. Fungi 2019, 5, 26. [Google Scholar] [CrossRef]
  89. Agrawal, R.; Yeldandi, A.; Savas, H.; Parekh, N.D.; Lombardi, P.J.; Hart, E.M. Pulmonary mucormycosis: Risk factors, radiologic findings, and pathologic correlation. Radiographics 2020, 40, 656–666. [Google Scholar] [CrossRef]
  90. Aggarwal, D.; Chander, J.; Janmeja, A.K.; Katyal, R. Pulmonary tuberculosis and mucormycosis co-infection in a diabetic patient. Lung India 2015, 32, 53–55. [Google Scholar] [CrossRef] [PubMed]
  91. Dube, P.; Saroa, R.; Palta, S. Coinfections in Intensive Care Unit with pulmonary tuberculosis and mucormycosis: A clinical dilemma. Indian J. Crit. Care Med. 2016, 20, 191–193. [Google Scholar] [CrossRef] [PubMed]
  92. Ramesh, P.; Kaur, G.; Deepak, D.; Kumar, P. Disseminated pulmonary mucormycosis with concomitant tuberculosis infection in a diabetic patient. Int. J. Mycobacteriol. 2020, 9, 95–97. [Google Scholar] [CrossRef]
  93. WHO Fungal Priority Pathogens List to Guide Research, Development and Public Health Action. Available online: https://www.who.int/publications/i/item/9789240060241 (accessed on 5 October 2024).
  94. Mendonça, A.; Santos, H.; Franco-Duarte, R.; Sampaio, P. Fungal infections diagnosis—Past, present and future. Res. Microbiol. 2022, 173, 103915. [Google Scholar] [CrossRef]
  95. Cornely, O.A.; Alastruey-Izquierdo, A.; Arenz, D.; Chen, S.C.A.; Dannaoui, E.; Hochhegger, B.; Hoenigl, M.; Jensen, H.E.; Lagrou, K.; Lewis, R.E.; et al. Global guideline for the diagnosis and management of mucormycosis: An initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium. Lancet Infect. Dis. 2019, 19, e405–e421. [Google Scholar] [CrossRef] [PubMed]
  96. Baxi, S.N.; Gohil, M.R.; Navadiya, A.J.; Bapodra, M.K.; Patel, H.R. Comparative evaluation of histopathological analysis, KOH wet mount and fungal culture to diagnose fungal infections in post-COVID patients. Indian J. Pathol. Microbiol. 2023, 66, 540–544. [Google Scholar] [PubMed]
  97. Jandial, R.; Choudhary, M.; Singh, K. Histomorphological spectrum of fungal infections. Int. J. Res. Med. Sci. 2019, 7, 4166–4170. [Google Scholar] [CrossRef]
  98. Seth, R.; Xess, I.; Jana, M. Diagnosis of invasive fungal infections in children. Indian Pediatr. 2019, 56, 229–236. [Google Scholar] [CrossRef]
  99. Vaishnav, A.; Gurukiran, G.; Ighodaro, O.; Kandi, V. Radiological and imaging evidence in the diagnosis and management of microbial infections: An update. Cureus 2023, 15, e48756. [Google Scholar] [CrossRef]
  100. Ahmad, Z.; Bagchi, S.; Naranje, P.; Agarwal, S.K.; Das, C.J. Imaging spectrum of pulmonary infections in renal transplant patients. Indian J. Radiol. Imaging 2020, 30, 273–279. [Google Scholar] [CrossRef]
  101. Grover, S.B.; Grover, H.; Antil, N.; Patra, S.; Sen, M.K.; Nair, D. Imaging approach to pulmonary infections in the immunocompromised patient. Indian J. Radiol. Imaging 2022, 32, 081–112. [Google Scholar] [CrossRef]
  102. Ramanan, P.; Wengenack, N.L.; Theel, E.S. Laboratory diagnostics for fungal infections: A review of current and future diagnostic assays. Clin. Chest Med. 2017, 38, 535–554. [Google Scholar] [CrossRef]
  103. Standard Operating Procedures for Fungal Identification and Detection of Antifungal Resistance Antimicrobial Resistance Surveillance and Research Network; Indian Council of Medical Research: New Delhi, India, 2019.
  104. Hage, C.A.; Carmona, E.M.; Epelbaum, O.; Evans, S.E.; Gabe, L.M.; Haydour, Q.; Knox, K.S.; Kolls, J.K.; Murad, M.H.; Wengenack, N.L.; et al. Microbiological laboratory testing in the diagnosis of fungal infections in pulmonary and critical care practice. An official american thoracic society clinical practice guideline. Am. J. Respir. Crit. Care Med. 2019, 200, 535–550. [Google Scholar] [CrossRef]
  105. Sandhar, T.K.; Chhina, D.K.; Gupta, V.; Chaudhary, J. Role of (1-3)-Β-D-Glucan Test in the Diagnosis of Invasive Fungal Infections among High-Risk Patients in a Tertiary Care Hospital. J. Lab. Physicians 2022, 14, 306–311. [Google Scholar] [CrossRef] [PubMed]
  106. Liu, A.; Chen, W.; Wei, Y.; Liang, J.; Liao, S.; Chen, Y.; Li, Y.; Wang, X.; Chen, W.; Qiu, Y.; et al. Comparison of diagnostic efficiency of detecting IgG and IgE with immunoassay method in diagnosing ABPA: A meta-analysis. BMC Pulm. Med. 2023, 23, 374. [Google Scholar] [CrossRef]
  107. Takazono, T.; Izumikawa, K. Recent advances in diagnosing chronic pulmonary aspergillosis. Front. Microbiol. 2018, 9, 1810. [Google Scholar] [CrossRef] [PubMed]
  108. Caceres, D.H.; Chiller, T.; Lindsley, M.D. Immunodiagnostic assays for the investigation of fungal outbreaks. Mycopathologia 2020, 185, 867–880. [Google Scholar] [CrossRef] [PubMed]
  109. Gudisa, R.; Harchand, R.; Rudramurthy, S.M. Nucleic-Acid-Based Molecular Fungal Diagnostics: A Way to a Better Future. Diagnostics 2024, 14, 520. [Google Scholar] [CrossRef]
  110. Srinivas, S.; Kumari, P.; Gupta, D.K. Utility of Panfungal PCR in the diagnosis of invasive fungal infections in febrile neutropenia. J. Fam. Med. Prim. Care 2021, 10, 2533–2540. [Google Scholar] [CrossRef] [PubMed]
  111. Poplin, V.; Smith, C.; Milsap, D.; Zabel, L.; Bahr, N.C. Diagnosis of pulmonary infections due to endemic fungi. Diagnostics 2021, 11, 856. [Google Scholar] [CrossRef]
  112. Liu, Y.; Wu, W.; Xiao, Y.; Zou, H.; Hao, S.; Jiang, Y. Application of metagenomic next-generation sequencing and targeted metagenomic next-generation sequencing in diagnosing pulmonary infections in immunocompetent and immunocompromised patients. Front. Cell. Infect. Microbiol. 2024, 14, 1439472. [Google Scholar] [CrossRef]
  113. Naik, S.; Kashyap, D.; Deep, J.; Darwish, S.; Cross, J.; Mansoor, E.; Garg, V.K.; Honnavar, P. Utilizing Next-Generation Sequencing: Advancements in the Diagnosis of Fungal Infections. Diagnostics 2024, 14, 1664. [Google Scholar] [CrossRef]
  114. Ghosh, A.; Paul, S.; Sood, P.; Rudramurthy, S.; Rajbanshi, A.; Jillwin, T.; Chakrabarti, A. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for the rapid identification of yeasts causing bloodstream infections. Clin. Microbiol. Infect. 2015, 21, 372–378. [Google Scholar] [CrossRef]
  115. Paul, S.; Singh, P.; Rudramurthy, S.M.; Chakrabarti, A.; Ghosh, A.K. Matrix-assisted laser desorption/ionization-time of flight mass spectrometry: Protocol standardization and database expansion for rapid identification of clinically important molds. Future Microbiol. 2017, 12, 1457–1466. [Google Scholar] [CrossRef] [PubMed]
Figure 1. Diagnostic tools for fungal infections in patients with pulmonary diseases.
Figure 1. Diagnostic tools for fungal infections in patients with pulmonary diseases.
Pathogens 14 00435 g001
Table 1. Studies and case reports involving Pulmonary Aspergillosis and PTB.
Table 1. Studies and case reports involving Pulmonary Aspergillosis and PTB.
Type of AspergillosisReported State and YearType of Study and ObjectivesStudy PopulationNumber of IsolatesSalient FindingsReference
Chronic Pulmonary Aspergillosis (CPA)New Delhi 2024Prospective
Objective: To confirm the presence of CPA in newly diagnosed PTB at baseline and the end of TB therapy
255—Recruited 158—Completed follow-up11.1% were positive at baseline, and 27.5% were positive at the
end of anti-tubercular
therapy
CPA can arise as Post-TB Lung Disease (PTLD)
or exist as a co-infection with TB
in new patients.
Jha et al. [25]
Chronic Pulmonary AspergillosisMaharashtra
2023
Cross-sectional/Observational
Objective: To determine the prevalence of CPA in patients with treated fibrocavitary PTB
429.5%Serological diagnosis is necessary for detecting CPA in patients with or without TB due
to similar clinical features.
Rajpurohit et al. [26]
Chronic Pulmonary AspergillosisNew Delhi 2022Prospective-Observational
Objective: To investigate the diagnostic accuracy, sensitivity, and specificity of different computed tomography (CT) results in identifying recurrence in suspects of PTB.
13024.2%The mediastinal necrotic lymph
node is the appropriate CT finding for differentiating between recurrent TB and post-TB sequelae in CPA complications.
Bharath et al. [27]
Chronic Pulmonary AspergillosisIndia
2022
Estimation Analysis
Objective: To estimate the prevalence of CPA related to PTB.
--Comprehensive estimation of total CPA burden in pulmonary TB patientsDenning et al. [23]
Chronic Pulmonary AspergillosisChandigarh 2023Retrospective
Objective: To determine the role of C-reactive protein (CRP) and erythrocyte sedimentation rate (ESR) for diagnosing chronic pulmonary aspergillosis (CPA)
434 subjects and 20 disease controls-Erythrocyte Sedimentation
rate (ESR) and C-reactive protein (CRP) play a significant role as biomarkers in CPA diagnosis among Post-TB Lung Disease (PTLD) cases.
Sehgal et al. [28]
AspergillomaUttarakhand 2023Case Report-1Aspergilloma was found as a mass in the intrabronchial region instead of a lung cavity in a patient with TB a decade ago.Lahiri et al. [29]
Invasive Pulmonary AspergillosisChandigarh 2022Case Report-1A 47-year-old male had a sequelae of Coronavirus Disease-2019 (COVID-19) complicated by TB and IPAGandotra et al. [30]
Chronic Cavitary Pulmonary AspergillosisKarnataka 2022Case Report-1In a 57-year-old adult male, COVID-19 had reactivated latent aspergilloma, and the condition developed into CCPA, a more severe form of aspergillosis. This patient reportedly had a TB and aspergilloma co-infection 20 years ago.Chaurasia et al. [31]
Table 2. Case reports on pulmonary cryptococcosis and PTB.
Table 2. Case reports on pulmonary cryptococcosis and PTB.
Reported State/YearSite of InfectionSalient FindingsReference
New Delhi 2019LungA 26-year-old female was initially diagnosed with TB, and treatment was initiated, but she was later diagnosed with cryptococcosis.Meena et al. [47]
New Delhi 2018Lung and CNSAn immunocompetent child suspected of having TB was diagnosed with disseminated cryptococcosis at a later stageIsmail et al. [48]
New Delhi 2016LungIn a 36-year-old male, co-infection of pulmonary cryptococcosis and TB was reported.Jain et al. [49]
New Delhi 2016LungA 45-year-old male with a history of TB was presented with a mass in the right lower lobe; similar to a lung tumor, but was eventually diagnosed as cryptococcoma through CT and histopathological examination.Pawar et al. [50]
New Delhi 2015Lung/Adrenal glandA 45-year-old male, with no TB history but initially diagnosed as disseminated TB, was later diagnosed with cryptococcosis by histopathological findings.Ranjan et al. [51]
Table 3. Case reports on pulmonary histoplasmosis being misdiagnosed as TB.
Table 3. Case reports on pulmonary histoplasmosis being misdiagnosed as TB.
Reported State/YearSite of InfectionSalient FindingsReference
Rajasthan 2021LungA 28-year-old with pulmonary histoplasmosis was misdiagnosed as miliary TBAgarwal et al. [77]
Chandigarh 2020Skin, LungDisseminated TB and histoplasmosis co-infection were reported in a 50-year-old male.Anot et al. [78]
New Delhi 2019LungMulti-Drug Resistant-TB was suspected in a 59-year-old female with a history of cutaneous TB who presented with manifestations such as fever and dry cough. Eventually, a PET scan revealed a soft tissue nodule, and histopathological examination confirmed the presence of H. capsulatum.Dutta et al. [79]
Telangana 2018Adrenal gland, LungHepatitis C was confirmed; the case study presented with fever and was treated for four months with ATT for suspected TB, but was finally diagnosed with Histoplasmosis, which mimicked TB in clinical manifestations.Ramesh et al. [80]
Table 4. Studies on pulmonary candidiasis and TB co-infections across India.
Table 4. Studies on pulmonary candidiasis and TB co-infections across India.
Reported State/YearType of StudyStudy PopulationNumber of IsolatesSite of InfectionSalient FindingsReference
Uttarakhand 2016Case Report-1LungIn a 30-year-old female, the coexistence of drug-resistant TB with invasive candidiasis was reported.Khanduri et al. [85]
Rajasthan
2016
Prevalence Study
Objective: To determine the prevalence of opportunistic candidal infection in TB patients
60 confirmed Pulmonary TB patients33LungThe presence of Candida in sputum samples among PTB patients was reported using SDA and ChromAgar cultures.Astekar et al. [81]
Maharashtra
2016
Prospective Observational Study
Objective: To study the clinical profile of renal transplant recipients.
45 renal transplant recipients (RTRs)7-Among renal transplant recipients, TB with candidiasis and CMV with TB were found in 7 patients.Kumar et al. [86]
Table 5. Case reports on pulmonary mucormycosis and TB.
Table 5. Case reports on pulmonary mucormycosis and TB.
StateYearSite of InfectionSalient FindingsReference
Chandigarh
2015
2015LungCo-infection of TB and mucormycosis in a
30-year-old diabetic patient was reported.
Aggarwal et al. [90]
Puducherry
2016
2016LungPulmonary TB with mucormycosis co-infection
was demonstrated in a 72-year-old diabetic
patient admitted to the intensive care Unit.
Dube et al. [91]
New Delhi
2020
2020LungDisseminated pulmonary mucormycosis and
TB co-infection in a diabetic patient was reported.
Ramesh et al. [92]
Disclaimer/Publisher’s Note: The statements, opinions and data contained in all publications are solely those of the individual author(s) and contributor(s) and not of MDPI and/or the editor(s). MDPI and/or the editor(s) disclaim responsibility for any injury to people or property resulting from any ideas, methods, instructions or products referred to in the content.

Share and Cite

MDPI and ACS Style

Regupathy, J.; Rajendran, P.; Kumar, V.; Shanmugam, S. Is Pulmonary Mycoses Shadowed by Tuberculosis? Mandate to Hit the Bull’s Eye—An Indian Perspective. Pathogens 2025, 14, 435. https://doi.org/10.3390/pathogens14050435

AMA Style

Regupathy J, Rajendran P, Kumar V, Shanmugam S. Is Pulmonary Mycoses Shadowed by Tuberculosis? Mandate to Hit the Bull’s Eye—An Indian Perspective. Pathogens. 2025; 14(5):435. https://doi.org/10.3390/pathogens14050435

Chicago/Turabian Style

Regupathy, Jeevarahini, Priya Rajendran, Vinod Kumar, and Sivakumar Shanmugam. 2025. "Is Pulmonary Mycoses Shadowed by Tuberculosis? Mandate to Hit the Bull’s Eye—An Indian Perspective" Pathogens 14, no. 5: 435. https://doi.org/10.3390/pathogens14050435

APA Style

Regupathy, J., Rajendran, P., Kumar, V., & Shanmugam, S. (2025). Is Pulmonary Mycoses Shadowed by Tuberculosis? Mandate to Hit the Bull’s Eye—An Indian Perspective. Pathogens, 14(5), 435. https://doi.org/10.3390/pathogens14050435

Note that from the first issue of 2016, this journal uses article numbers instead of page numbers. See further details here.

Article Metrics

Back to TopTop