Detection, Transmission, and Characterization of Grapevine Virus H in Croatia
Abstract
:1. Introduction
2. Results
2.1. Virus Detection
2.2. Virus Transmission
2.3. Sequencing and Phylogenetic Analyses
3. Discussion
4. Materials and Methods
4.1. Plant Material and RNA Extraction
4.2. Virus Detection
4.3. Virus Transmission
4.4. Sequencing and Phylogenetic Analyses
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
- Maletić, E.; Pejić, I.; Karoglan Kontić, J.; Zdunić, G.; Preiner, D.; Šimon, S.; Andabaka, Ž.; Žulj Mihaljević, M.; Bubola, M.; Marković, Z.; et al. Ampelographic and genetic characterization of Croatian grapevine cultivars. Vitis 2015, 54, 93–98. [Google Scholar]
- Maletić, E.; Karoglan Kontić, J.; Pejić, I.; Preiner, D.; Zdunić, G.; Bubola, M.; Stupić, D.; Andabaka, Ž.; Marković, Z.; Šimon, S.; et al. Green Book: Indigeneous Grapevine Cultivars of Croatia; Državni Zavod za Zaštitu Prirode: Zagreb, Croatia, 2015. [Google Scholar]
- Andabaka, Ž.; Stupić, D.; Marković, Z.; Preiner, D. Novi trendovi u proizvodnji sadnog materijala autohtonih sorata vinove loze u Hrvatskoj. Glas. Zaštite Bilja 2011, 2011, 46–56. [Google Scholar]
- Karoglan Kontić, J.; Preiner, D.; Šimon, S.; Zdunić, G.; Poljuha, D.; Maletić, E. Sanitary status of Croatian native grapevine cultivars. Agric. Conspec. Sci. 2009, 74, 99–103. [Google Scholar]
- Poljuha, D.; Sladonja, B.; Bubola, M. Incidence of viruses infecting grapevine cultivars in Istria (Croatia). J. Food Agric. Environ. 2010, 8, 166–169. [Google Scholar]
- Vončina, D.; Preiner, D.; Šimon, S.; Cvjetković, B.; Maletić, E.; Pejić, I.; Karoglan Kontić, J. Distribution of nine viruses in Croatian autochthonous grapevine (Vitis vinifera L.) cultivars from Dalmatian region included in clonal selection. J. Cent. Eur. Agric. 2019, 20, 262–273. [Google Scholar] [CrossRef]
- Martelli, G.P.; Boudon-Padieu, E. Directory of Infectious Diseases of Grapevines and Viroses and Virus-like Diseases of the Grapevine: Bibliographic Report 1998–2004; CIHEAM: Bari, Italy, 2006; pp. 59–76. [Google Scholar]
- Meng, B.; Martelli, G.P.; Golino, D.A.; Fuchs, M. Grapevine Viruses: Molecular Biology, Diagnostics and Management, 1st ed.; Springer: Cham, Switzerland, 2017; pp. 127–229. [Google Scholar]
- Blouin, A.G.; Keenan, S.; Napier, K.R.; Barrero, R.A.; MacDiarmid, R.M. Identification of a novel vitivirus from grapevines in New Zealand. Arch. Virol. 2017, 163, 281–284. [Google Scholar] [CrossRef]
- Blouin, A.G.; Chooi, K.M.; Warren, B.; Napier, K.R.; Barrero, R.A.; MacDiarmid, R.M. Grapevine virus I, a putative new vitivirus detected in co-infection with grapevine virus G in New Zealand. Arch. Virol. 2018, 163, 1371–1374. [Google Scholar] [CrossRef]
- Candresse, T.; Theil, S.; Faure, C.; Marais, A. Determination of the complete genomic sequence of grapevine virus H, a novel vitivirus infecting grapevine. Arch. Virol. 2018, 163, 277–280. [Google Scholar] [CrossRef] [PubMed]
- Diaz-Lara, A.; Golino, D.; Al Rwahnih, M. Genomic characterization of grapevine virus J, a novel virus identified in grapevine. Arch. Virol. 2018, 163, 1965–1967. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Debat, H.; Zavallo, D.; Brisbane, R.S.; Vončina, D.; Almeida, R.P.P.; Blouin, A.G.; Asurmendi, S. Grapevine virus L: A novel vitivirus in grapevine. Eur. J. Plant Pathol. 2019, 155, 319–328. [Google Scholar] [CrossRef]
- Alabi, O.J.; McBride, S.; Appel, D.N.; Al Rwahnih, M.; Pontasch, F.M. Grapevine virus M, a novel vitivirus discovered in the American hybrid bunch grape cultivar Blanc du Bois in Texas. Arch. Virol. 2019, 164, 1739–1741. [Google Scholar] [CrossRef] [PubMed]
- Conti, M.; Milne, R.G.; Luisoni, E.; Boccardo, G.A. A closterovirus from stem pitting diseases grapevine. Phytopathology 1980, 70, 394–399. [Google Scholar] [CrossRef]
- Boscia, D.; Savino, V.; Minafra, A.; Namba, S.; Elicio, V.; Castellano, M.A.; Gonsalves, D.; Martelli, G.P. Properties of a filamentous virus isolated from grapevines affected by corky bark. Arch. Virol. 1993, 130, 109–120. [Google Scholar] [CrossRef]
- Savino, V.; Boscia, D.; Musci, D.; Martelli, G.P. Effect of legno Riccio (stem pitting) on “Italia” vines grafted on rootstocks of different origin. Phytopathol. Mediterr. 1985, 24, 68–72. [Google Scholar]
- Mannini, F. Virus elimination in grapevine and crop performance. In Proceedings of the 14th Meeting of the ICVG, Locorotondo, Italy, 12–17 September 2003; pp. 234–239. [Google Scholar]
- Maliogka, V.I.; Martelli, G.P.; Fuchs, M.; Katis, N.I. Control of viruses infecting grapevine. Adv. Virus Res. 2015, 91, 175–227. [Google Scholar]
- Engelbrecht, D.J.; Kasdorf, G.G.F. Field spread of corky bark, fleck, leafroll and Shiraz decline diseases and associated viruses in South African grapevines. Phytophylactica 1990, 22, 347–354. [Google Scholar]
- Garau, R.; Prota, V.A.; Boscia, D.; Fiori, M.; Prota, U. Pseudococcus affinis new vector of grapevine trichoviruses A and B. Vitis 1995, 34, 67–68. [Google Scholar]
- Fortusini, A.G.; Scattini, S.; Prati, S.; Cinquanta, G.; Belli, G. Transmission of grapevine leafroll virus 1 (GLRaV-1) and grapevine virus A (GVA) by scale insects. In Proceedings of the 12th Meeting of the ICVG, Lisbon, Portugal, 29 September–2 October 1997; pp. 121–122. [Google Scholar]
- Goszczynski, D.E.; Jooste, A.E.C. Shiraz disease (SD) is transmitted by the mealybug Planococcus ficus and associated with Grapevine virus A. In Proceedings of the 14th Meeting of the ICVG, Locorotondo, Italy, 12–17 September 2003; p. 219. [Google Scholar]
- Nakano, M.; Nakaune, R.; Komazaki, S. Mealybug transmission of grapevine viruses in Japan. In Proceedings of the 14th Meeting of the ICVG, Locorotondo, Italy, 12–17 September 2003; p. 218. [Google Scholar]
- Zorloni, A.; Prati, S.; Bianco, P.; Belli, G. Transmission of grapevine virus A and grapevine leafroll-associated virus 3 by Heliococcus bohemicus. J. Plant Pathol. 2006, 88, 325–328. [Google Scholar]
- Hommay, G.; Komar, V.; Lemaire, O.; Herbach, E. Grapevine virus A transmission by larvae of Parthenolecanium corni. Eur. J. Plant Pathol. 2008, 121, 185–188. [Google Scholar] [CrossRef]
- Le Maguet, J.; Beuve, M.; Herrbach, E.; Lemaire, O. Transmission of six ampeloviruses and two vitiviruses to grapevine by Phenacoccus aceris. Phytopathology 2012, 102, 712–723. [Google Scholar] [CrossRef] [Green Version]
- Tanne, E.; Ben-Dov, Y.; Raccah, B. Transmission of the corky-bark disease by the mealybug Planococcus ficus. Phytoparasitica 1993, 17, 55. [Google Scholar] [CrossRef]
- Nakaune, R.S.; Toda, M.; Mochizuki, M.; Nakano, M. Identification and characterization of a new vitivirus from grapevine. Arch. Virol. 2008, 153, 1827–1832. [Google Scholar] [CrossRef] [PubMed]
- Rowhani, A.; Daubert, S.; Arnold, K.; Al Rwahnih, M.; Klaassen, V.; Golino, D.; Uyemoto, J.K. Synergy between grapevine vitiviruses and grapevine leafroll viruses. Eur. J. Plant Pathol. 2018, 151, 919–925. [Google Scholar] [CrossRef]
- Blaisdell, G.K.; Zhang, S.; Rowhani, A.; Klaassen, V.; Cooper, M.L.; Daane, K.M.; Almeida, R.P.P. Trends in vector-borne transmission efficiency from coinfected hosts: Grapevine leafroll-associated virus-3 and grapevine virus A. Eur. J. Plant Pathol. 2020, 156, 1163–1167. [Google Scholar] [CrossRef]
- La Notte, P.; Buzkan, N.; Choueiri, E.; Minafra, A.; Martelli, G.P. Acquisition and transmission of grapevine virus A by the mealybug Pseudococcus longispinus. J. Plant Pathol. 1997, 79, 79–85. [Google Scholar]
- Bonavia, M.; Digiaro, M.; Boscia, D.; Boari, A.; Bottalico, G.; Savino, V.; Martelli, G.P. Studies on “corky rugose wood” of grapevine and the diagnosis of grapevine virus B. Vitis 1996, 35, 53–58. [Google Scholar]
- Castrovilli, S.; Gallitelli, D.A. Comparison of two isolates of grapevine virus A. Phytopathol. Mediterr. 1985, 24, 219–220. [Google Scholar]
- Monette, P.L.; Godkin, S.E.; James, D. Mechanical sap transmission of a closterovirus from in vitro shoot tip cultures of a leafroll-affected grapevine to Nicotiana benthamiana. Vitis 1990, 29, 49–55. [Google Scholar]
- Diaz-Lara, A.; Brisbane, R.S.; Aram, K.; Golino, D.; Al Rwahnih, M. Detection of new vitiviruses infecting grapevine in California. Arch. Virol. 2019, 164, 2573–2580. [Google Scholar] [CrossRef]
- Panailidou, P.; Lotos, L.; Sassalou, C.-L.; Gagiano, E.; Pietersen, G.; Katis, N.; Maglioka, V.I. First report of grapevine virus H (GVH) in grapevine in Greece. Plant Dis. 2021. [Google Scholar] [CrossRef] [PubMed]
- Vončina, D.; Almeida, R.P.P. Screening of some Croatian autochthonous grapevine varieties reveals a multitude of viruses, including novel ones. Arch. Virol. 2018, 163, 2239–2243. [Google Scholar] [CrossRef] [Green Version]
- Engelbrecht, D.J.; Kasdorf, G.G.F. Transmission of grapevine leafroll disease and associated closteroviruses by the vine mealybug Planococcus ficus. Phytophylactica 1990, 22, 341–346. [Google Scholar]
- Bertin, S.; Pacifico, D.; Cavalieri, V.; Marzachì, C.; Bosco, D. Transmission of grapevine virus A and grapevine leafroll-associated viruses 1 and 3 by Planococcus ficus and Planococcus citri fed on mixed-infected plants. Ann. Appl. Biol. 2016, 169, 53–63. [Google Scholar] [CrossRef]
- Osman, F.; Leutenegger, C.; Golino, D.; Rowhani, A. Real-time RT-PCR (TaqMan®) assays for the detection of grapevine leafroll associated viruses 1–5 and 9. J. Virol. Methods 2007, 141, 22–29. [Google Scholar] [CrossRef]
- Diaz-Lara, A.; Klaassen, V.; Stevens, K.; Sudarshana, M.R.; Rowhani, A.; Maree, H.J.; Song, Y.; Chooi, K.R.; Blouin, A.G.; Habili, N.; et al. Characterization of grapevine leafroll-associated virus 3 genetic variants and application towards RT-qPCR assay design. PLoS ONE 2018, 13, e0208862. [Google Scholar]
- Osman, F.; Rowhani, A. Real-time RT-PCR (TaqMan®) assays for the detection of viruses associated with Rugose wood complex of grapevine. J. Virol. Methods 2008, 154, 69–75. [Google Scholar] [CrossRef]
- Daane, K.M.; Middleton, M.C.; Sforza, R.; Cooper, M.L.; Walton, V.M.; Walsh, D.B.; Zaviezo, T.; Almeida, R.P.P. Development of a multiplex PCR for identification of vineyard mealybugs. Environ. Entomol. 2011, 40, 1595–1603. [Google Scholar] [CrossRef] [PubMed]
- Hall, T.A. BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41, 95–98. [Google Scholar]
- Tamura, K.; Stecher, G.; Kumar, S. MEGA11: Molecular evolutionary genetics analysis version 11. Mol. Biol. Evol. 2021, 38, 3022–3027. [Google Scholar] [CrossRef]
Cultivar | Cultivar | Cultivar | Cultivar |
---|---|---|---|
Pošip crni Maraština Dugovrst Babić Vranac Cibib Zlatarica vrgorska Crljenak kaštelanski 1 Crljenak kaštelanski 2 Ruža bijela II Palaruša hvarska Dobričić Grk Drnekuša mala Zadarka Ninčuša Kadarun Lasina Dišeča ranina Plavac mali sivi II Zinfandel Vlaški crljenak Medna Žilavka Žumić Muškat bijeli omiški Pavicić Palaruša viška Jarbola | Sušac Malvazija župska Bilan bijeli Beret Šemperinka Gustopupica Lelekuš Galac Stara brajda Bak Rudež Plavac mali crni Zlatarica blatska Gustopupica 0031 Kujundžuša Prč Ninska crvena Crljenak viški Malvazija dubrovačka bijela Šarica trišnjevica Trojščina Divjaka Malvazija istarska Moslavac Siložder Muškatel Bogdanuša Cipar Garganja | Lun Krstičevica Krivaja crvena Mijajuša Mekuja Cetinka Babica plosnata Plavac mali sivi Ruža bijela I Štajerka Marinkovića grozje Pribidrag Kadarka Debit Palagružonka Žlahtina Stradunska Silbijanac Topol Pršljivka Muškat ruža Frmentun Vranac Teran Bijeli debejan Plavec žuti Pošip Primitivo Glavanjuša | Brajdica bijela Petovka Gegić Drnekuša mala Oskorušica Kuć bijeli Razaklija Crnka Lipovina Plavčina Rogoznička Bratkovina crvena Šljiva Tanetova Bljuzgavac Debejan crni Kurtelaška Bratkovina bijela Svrdlovina crna Kozjak Mladenka Šipelj Svjetljak Glavinuša Babica Ljutun |
Cultivar | Viruses | ||||
---|---|---|---|---|---|
ArMV GFLV | GLRaV-1 | GLRaV-3 | GVA | GVG | |
Babica plosnata | + | + | + | ||
Bljuzgavac | + | + | + | + | |
Brajdica bijela | + | + | + | ||
Gustopupica | + | + | |||
Kozjak | + | + | + | ||
Malvazija istarska | + | + | |||
Muškatel | + | + | + | ||
Plavčina | + | + | |||
Svrdlovina crna | + | + | + |
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Jagunić, M.; Lazarević, B.; Nikolić, K.; Stupić, D.; Preiner, D.; Vončina, D. Detection, Transmission, and Characterization of Grapevine Virus H in Croatia. Pathogens 2021, 10, 1578. https://doi.org/10.3390/pathogens10121578
Jagunić M, Lazarević B, Nikolić K, Stupić D, Preiner D, Vončina D. Detection, Transmission, and Characterization of Grapevine Virus H in Croatia. Pathogens. 2021; 10(12):1578. https://doi.org/10.3390/pathogens10121578
Chicago/Turabian StyleJagunić, Martin, Boris Lazarević, Kristina Nikolić, Domagoj Stupić, Darko Preiner, and Darko Vončina. 2021. "Detection, Transmission, and Characterization of Grapevine Virus H in Croatia" Pathogens 10, no. 12: 1578. https://doi.org/10.3390/pathogens10121578
APA StyleJagunić, M., Lazarević, B., Nikolić, K., Stupić, D., Preiner, D., & Vončina, D. (2021). Detection, Transmission, and Characterization of Grapevine Virus H in Croatia. Pathogens, 10(12), 1578. https://doi.org/10.3390/pathogens10121578