1. Introduction
Cassava or tapioca (
Manihot esculenta Crantz) is a tuber crop that plays an important role in food security for millions of people, especially in the developing countries of the globe, by an alternate source of energy. Among the starchy staples, cassava gives a carbohydrate production of about 40% higher than rice and 25% more than maize. Apart from this, cassava roots consist of essential micronutrients, such as vitamins A, B, and C, iron, and zinc [
1]. Approximately 500 million people across the globe depend on cassava for carbohydrate sources [
2], making it the third-largest source of carbohydrate for human food in the world [
3]. The reason is that it is tolerant to poor soils, diseases, and drought [
4]. In addition, cassava can produce more yield per unit area, capacity to withstand adverse biotic and abiotic stresses and adaptability to marginal lands [
5]. In India, cassava has been cultivated for more than a century, and it is considered as an industrial crop because the tuber is used for starch and sago production. In India, 60–70 percent of the total cassava production is used commercially to produce sago, starch, dried chips, flour, etc. In addition, the starch from cassava is used in textile industries as a sizing agent in pharmaceutical industries, making adhesives, dextrin manufacturing, paper industry, laundry, and many fast-food preparations.
Unlike other crops, cassava is a drought-resistant crop grown in areas with poor soil fertility conditions and soil problems [
6]. Furthermore, cassava has a strong competitive advantage in the tropical and subtropical cultivation systems because of its high efficiency in transforming solar energy into bioenergy (250 k cal ha
−1 day
−1) with high yield potential, wide adaptability to different climates, and cropping systems [
5,
7]. In addition, the high starch content and its excellent physical and chemical characteristics have shifted the crop from being a small-scale subsistence crop to a large-scale commercial crop.
Cassava mosaic disease (CMD) is a serious disease caused by different species of cassava mosaic begomoviruses, which significantly limits cassava yield. To date, eleven distinct begomovirus species have been identified as the causal agents of CMD [
8]. Begomoviruses are known to be vectored by the whitefly (
Bemisia tabaci), a species complex consisting of more than 36 genetically distinct but morphologically indistinguishable cryptic species [
9]. Cassava is a vegetatively propagated crop; due to this, CMDs and their DNA satellites are transmitted through infected stem cuttings [
10]. Besides, the vegetative propagation of cassava also favours the propagule transmission of CMD. Unlike fungi and bacteria, viruses do not attack the structural integrity of their host tissues; instead, they subvert the synthetic machinery of the host cell, acting as molecular pirates [
11]. Therefore, the management of plant viral diseases appears difficult at the field level. Nevertheless, the management strategies like prevention of propagule transmission and control of viral vectors are currently adopted in cassava.
A plant’s nutrition determines the plant’s health, and better nutrition might improve the resistance to insect and disease infestation [
12]. Nutrients are the first line of defense against plant diseases and influence all parts of the disease “pyramid” [
13]. All the essential nutrients can decrease disease severity by altering disease resistance or tolerance level [
14]. Nutrients can reduce disease to an acceptable level or at least to a level that other practices further control [
15].
A survey was conducted in cassava growing regions of Tamil Nadu, India, and the result indicated that CMD incidence was more than 90%. The disease severity ranged from 2.35 to 4 on a scale of 1–5 with an overall mean of 3 [
16,
17]. The higher incidence may be attributed to indiscriminate use of CMD infected planting material, which was significantly higher than whitefly transmitted infection [
16,
17]. In addition, yield loss of 18–25% was recorded due to Indian cassava mosaic virus (ICMV) infection in India by Dasgupta et al. [
18], and this necessitates the development of a management strategy against CMD. Earlier study has indicated that upon fermentation of cow dung, the major and minor nutrients will be released which may be available to the plants. Also, the odour of fermented cow dung deters the insect vector in the field [
19]. Similarly, the neem cake provides the macro- and micronutrients to the plants [
20].
Bacillus subtilis has biopesticide properties against seed and soil-borne diseases, also enhances plant growth through the production of metabolites [
21]. The nutrients are required to alleviate the nutrient deficiency symptoms. With this background, a combined nutrient/biocontrol agent mixture was prepared.
We hypothesize that a combination of better nutrition and biocontrol agent could help cassava to tolerate CMD, resulting in higher yield. With this background, the study was formulated with the following objectives to (i) optimize the cassava spray timing on yield, starch, and cassava mosaic disease incidence on cassava genotype, (ii) quantify the interaction of cassava spray timing and genotypes on yield, starch and cassava mosaic disease incidence on different cassava genotype, and (iii) validate the effects of combined nutrient/biocontrol agent mixture in multilocation trials.
2. Materials and Methods
2.1. Preparation of the Combined Nutrient/Biocontrol Agent Mixture
Combined nutrient/biocontrol agent mixture was prepared by adding 40 kg of fresh cow dung, mixed in 100 L of distilled water, and filtered. One kg of
Bacillus subtilis and one kg of neem cake were added and mixed. Later, the container containing this mixture was tied with a gunny bag and allowed for fermentation (7–10 d) with intermittent stirring at an interval of 3 d. This fermented mixture is supplemented with 3 kg of a nutrient mixture containing 0.5% S as sulphate of potash, 0.9% K as potassium nitrate, 0.5% Mg as magnesium sulphate, 0.25% Zn as zinc sulphate, and 0.5% Fe as ferrous sulphate at the time of spraying and content volume was made up to the final spraying volume of 200 L with distilled water which was sufficient for one acre. The components of the combined nutrient/biocontrol agent mixture were presented in
Table 1.
2.2. Effect of Timing of Combined Nutrient/Biocontrol Agent Mixture Foliar Spray on Growth, Yield, Starch, and CMD
The experiment was designed in a randomized block design with four replications with a plot size of 46 m2. Cassava genotype H226 setts were planted with 90 × 90 cm spacing. To the experimental field, farmyard manure at the rate of 25 t ha−1 was applied at the time of planting. Fertilizers at the rate of 45:90:120 kg NPK ha−1 were applied as basal, and 45:0:120 kg NPK ha−1 was applied as a top dressing on 90 days after planting during earthing up. Intercultural operations viz., weeding, and application of plant protection chemicals were made on a need basis as a common package of practices to all the experiments.
Foliar spray of combined nutrient/biocontrol agent mixture in 10 lit of spray fluid for one treatment with four replications (4 plots = 185 m2) was sprayed through a knapsack sprayer. The treatments include foliar spray of combined nutrient/biocontrol agent mixture at 15-, 21- and 30-days interval and water sprayed control (without nutrient mixture spray) from one month after planting and to five months. The observations on plant growth parameters viz., plant length, stem girth, and yield attributes viz., number of tubers per plant, tuber length, tuber girth, tuber yield, starch, and CMD incidence were recorded in the middle of the field.
The plant height of each plant was measured from the base of the shoot to the longest leaf. An average of five plants was worked out in each replication, and the value was expressed in cm. Stem girth was calculated by measuring the circumference at the mid-portion of the stem in five randomly selected plants from each replication and expressed in cm.
The length of each tuber was measured from the base to the tip of the tuber. The tuber length was recorded in 25 tubers in each replication, and the average was expressed in cm. Tuber girth was measured at the three places of tuber, one at the center and two at halfway between the center on both edges of the tuber, and the average of these three values was expressed in cm. The tuber yield plant−1 was quantified as the fresh weight of the whole root of a single plant and expressed as kg plant−1.
The starch content was quantified using the anthrone method [
22]. In this method, 100 mg of tuber sample was macerated in 10 mL of 80% ethanol in a mortar and incubated for an hour. Later the macerate was centrifuged for 15 min at 3000 rpm, and the supernatant was discarded. The residue was stirred well with another 10 mL of perchloric acid mixture (6.5 mL of perchloric acid + 5 mL water) and incubated for three h. After the expiry of time, the mixture was filtered and made up to 50 mL with distilled water. An aliquot of 0.2 mL was taken in a test tube, and 4 mL of 0.2% anthrone reagent was added slowly. The mixture was placed in an ice bath for five min, well shaken, and placed in a boiling water bath for 10 min and then cooled. The green colour developed was measured in a spectrophotometer at 640 nm. The glucose content was referred from the standard curve and multiplied by 0.9 for measuring starch content and expressed in percentage on a fresh weight basis.
CMD incidence was assessed by the number of visibly diseased plants, usually in relation to the total number of plants assessed and expressed as the proportion or percentage of plants infected with CMD [
23]. Approximately 50 samples were chosen for the observation of disease incidence and disease severity. Plants were selected from two sides and along a diagonal across the field in a “Z” configuration [
24]. Disease severity was estimated based on the 1–5 scale as demonstrated by Hahn et al. [
25] (
Table 2).
2.3. Interaction Effect of Timing of Combined Nutrient/Biocontrol Agent Mixture Foliar Spray and Genotypes on Yield Attributes, Tuber Yield, Starch, and CMD Incidence
An experiment in a factorial randomized block design with four replications was conducted to quantify the interaction effect of timing of foliar spray of combined nutrient/biocontrol agent mixture and different cassava genotypes on the yield attributes, starch, and CMD incidence in farmer’s field in one acre field. The first factor was the timing of foliar spray of combined nutrient/biocontrol agent mixture and the second factor was genotype. The first factor had four levels (15-, 21- 30-days interval, and water sprayed control). The second factor was genotype with three levels (Kungumarose, H226, and Mulluvadi 1). The crop husbandry was the same as experiment 1. The observations on yield attributes viz., number of tubers per plant, tuber length, tuber girth, tuber yield, starch, and CMD incidence were recorded.
Apart from this large-scale field experiment as Frontline Demonstrations (FLDs) at farmers holding was conducted to assess the performance of different cassava varieties. The field experiment was conducted in a factorial randomized block design with four replications in a one-acre field. The experiment had two factors, namely foliar spray of combined nutrient/biocontrol agent mixture and genotypes. There were two levels in a foliar spray (combined nutrient/biocontrol agent mixture spray at 21 d from one month after planting to five months and water sprayed control) and four levels in cassava genotypes (MVD 1, YTP 1, Kungumarose, and H226). The crop husbandry was similar to experiment 1. At harvest, the observations like tuber yield, starch content, and CMD incidence were recorded as detailed elsewhere.
2.4. Multilocation Validation of Combined Nutrient/Biocontrol Agent Mixture Foliar Spray on Tuber Yield, Starch, and CMD
The field experiment was conducted in a randomized block design with three replications. The experiment was conducted at 20 locations. The cassava plants were either sprayed with combined nutrient/biocontrol agent mixture at 21 d interval from 1 month to 5 months after planting or water sprayed control. All the experiment was conducted at farmers field, in an area of one acre. The crop husbandry was the same as experiment 1. The observation like tuber yield, starch content, and CMD incidence were recorded as described elsewhere.
2.5. Impact of Combined Nutrient/Biocontrol Agent Mixture on Cassava Leaf Octadecatrienoic Acid and Trilinolein
Two sets of cassava plants were grown till the harvest stage under greenhouse conditions. One set was treated with combined nutrient/biocontrol agent mixture while the other with water from 1 to 5 months after planting at 21 d intervals. Leaf samples were harvested for metabolite extraction at 1 day after spraying at 5th month after planting. Metabolite extraction and sample derivatization were performed as described by Lisec et al. [
26], and the metabolites were determined using GC-TOF-MS. 1 µL of the derivatized extract was injected into DB-5MS capillary (30 × 0.25 × 0.25 µm). The inlet temperature was set at 260 °C. After a solvent delay for six minutes, the initial GC oven temperature was set at 60 °C, after injection for 1 min, the GC oven temperature was raised to 280 °C with 15 °C min
−1 and held at 280 °C for 15 min. The injection temperature was set to 280 °C, and the ion source temperature was matched. Helium was used as the carrier gas with a constant flow rate set at 1 mL min
−1. The measurement was performed with electron impact ionization (70 eV) in the full scan mode (m/z from 30 to 550). The metabolites were identified based on retention time index specific masses, via comparing with reference spectra in mass spectral libraries (NIST 2005, Wiley 7.0).
5. Discussion
The major findings of this study are (i) foliar application of combined nutrient/biocontrol agent mixture at 21 d interval from one to five months after planting had improved the tuber yield, and its associated traits along with decreased CMD incidence compared to water sprayed control plants, (ii) foliar application of combined nutrient/biocontrol agent mixture increased the defense metabolite namely octadecatrienoic acid and trilinolein content than water sprayed control plants and (iii) multilocation field experiment indicates that foliar application of combined nutrient/biocontrol agent mixture had improved the tuber yield along with decreased CMD incidence.
The combined nutrient/biocontrol agent mixture contains fermented cow dung, neem cake,
Bacillus subtilis, and nutrients like K, Mg. Fe, Zn, and S. Study indicated a strong positive relationship between K and cassava yield [
27]. Long-term fertilizer experiment indicated that due to the monoculture of cassava, the soil will be deficient in K, and will be the most limiting nutritional constraint for crop production [
28]. Also, K is required in a significant amount (343 kg ha
−1) to attain a tuber yield of 45 mt ha
−1 [
28]. Hence, it may be inferred that K in the combined nutrient/biocontrol agent mixture might help in achieving a higher yield than water sprayed control plants.
The increased yield in combined nutrient/biocontrol agent mixture treated plants may be associated with more translocation of carbohydrate from leaf to the developing tuber in the presence of K [
29]. This was evidenced by increased starch content in the combined nutrient/biocontrol agent mixture sprayed plants (
Table 3,
Table 4 and
Table 8). Malavolta et al. [
30] showed that K deficient plant tuber had a lower starch content than K sufficient plants. In the present study, we observed K deficiency in most of the places. Also, the present study showed a positive linear relationship between cassava tuber yield and starch content (
Figure 2). Potassium causes thicker outer walls in epidermal cells, thus preventing disease attack, and hardened tissue is inversely related to infestation intensity [
31]. In the present study, foliar application of K decreased the CMD incidence. Similarly, the application of K decreased the infestation of the Tobacco mosaic virus [
32]. Increased tuber yield results from the increased number of tubers per plant, tuber length, and tuber girth. Hence, we conclude that foliar application of K might positively impact any one of the yield components, resulting in increased yield.
Fe, Zn, and Mg were added to the combined nutrient/biocontrol agent mixture to reduce the chlorosis symptom, which is caused by either soil factor or CMD. Our soil analysis data indicates the study area soils are also deficient in Fe, Zn, and Mg (data not shown). We hypothesize that the combined application of K, Fe, Zn, and Mg may improve the tuber yield, like in mungbean [
33]. Micronutrients are able to reduce the severity by inducing the resistance within the plant known as Systemic Acquired Resistance (SAR) [
15]. Iron is an essential micronutrient reported by most living organisms and pathogens [
34]. Iron can catalyze the formation of deleterious reactive oxygen species, and hosts may use iron to increase local oxidative stress in defense responses against pathogens. Zinc plays an important role in activating enzymes involved in various metabolic pathways, especially in protein and starch synthesis. A balanced zinc application was found to increase the phenol contents to reduce the severity of rice sheath blight [
35].
Wang [
36] reported that
Bacillus subtilis is a growth promoter and antagonistic to a variety of pathogens as a result of multiple mechanisms, including plant growth promotion (PGP), antibiosis, lysis of pathogen hyphae, and induced systemic resistance (ISR).
B. subtilis has a positive effect on disease suppression by altering the composition and function of soil microbial communities [
37].
Bacillus association stimulates plant immunity by ISR, leading to enhanced plant growth during cucumber mosaic virus infection [
38]. Similarly, Wang et al. [
39] reported that
Bacillus spp. induced systemic resistance against viral disease caused by tobacco mosaic virus by inhibiting viral coat protein synthesis. Esawy et al. [
40] and Radhakrishnan et al. [
21] observed that, some of the
Bacillus spp. produce the antiviral compounds against the pathogen. In the present study, due to foliar application of combined nutrient/biocontrol agent mixture had increased octadecatrienoic acid (2.28-fold) and trilinolein (126-fold) than control plants (
Figure 1). Chan et al. [
41] isolated trilinolein, an antioxidant from
Panax pseudoginseng and found that trilinolein had a synergistic action with antioxidant defense systems. In the present study, the 126-fold increase in trilinolein indicates a strong antioxidant defense system in combined nutrient/biocontrol agent mixture sprayed plants. Octadecadienoic acid i.e., linoleic acid, is increased under combined nutrient/biocontrol agent mixture sprayed plants (
Figure 1), and it is the precursor for jasmonate biosynthesis [
42]. Jasmonic acid is known to be involved as a signaling compound in multiple aspects of plant responses to their biotic and abiotic environment and is also involved in the production of oxylipin or its derivatives [
43,
44]. Overall, it can be concluded that
Bacillus subtilis can induce SAR as evidenced by higher levels of jasmonic acid and trilinolein, which might decrease the CMD severity in combined nutrient/biocontrol agent mixture sprayed plants.
The multilocation trial indicates that irrespective of the varieties and location, combined nutrient/biocontrol agent mixture sprayed plants recorded a significant reduction in CMD incidence (65%) as compared to water sprayed plants. Also, the yield was increased by 26% over unsprayed control. The increased yield could be achieved through increased starch mobilization (9%) and decreased CMD incidence (
Table 8). The present study also indicated a negative relationship between CMD incidence and tuber yield (
Figure 2).