Evidence Mapping of ctDNA Reporting in Pancreatic Ductal Adenocarcinoma: Toward a Shared Quantitative Language for ctDNA
Simple Summary
Abstract
1. Introduction
1.1. Why Quantitative Molecular Frameworks Are Straightforward in Virology but Difficult in Oncology
1.2. Early ctDNA Applications: Single-Locus Assays and the Rise in VAF
1.3. The Shift to Multi-Locus Assays and the Loss of a Common Benchmark
2. Materials and Methods
2.1. Study Design
2.2. Literature Search Strategy
2.3. Study Selection
2.4. Data Extraction
2.5. Data Synthesis
2.6. Interpretive Framework
3. Results

3.1. Quantification Approaches in Primary ctDNA Studies of Pancreatic Cancer
| Study | Year | n | Clinical Setting | Technique | Locus Type | Paradigm | Metric |
|---|---|---|---|---|---|---|---|
| Binary | |||||||
| Brychta et al. [21] | 2016 | 50 | Early-stage/diagnostic | Digital PCR | Single (KRAS) | Binary | Mutation detected |
| Chen et al. [22] | 2017 | 189 | Advanced/unresectable | ddPCR | Single (KRAS) | Binary | KRAS ctDNA per 105 GEq |
| Guo et al. [23] | 2020 | 113 | Resectable | NGS | Single (KRAS) | Binary | KRAS G12D detected |
| Macgregor-Das et al. [24] | 2020 | 67 | Diagnostic | Digital NGS | Single (KRAS/GNAS) | Binary | Hotspot mutation detected |
| van der Sijde et al. [25] | 2021 | 48 | Mixed | NGS | Multi-locus | Binary | TP53 mutation detected |
| Wang et al. [26] | 2022 | 105 | Mixed/diagnostic | ddPCR | Single (KRAS) | Binary | Mutation detected |
| Watanabe et al. [27] | 2022 | 145 | Resected | Tumour-informed sequencing | Multi-locus | Binary | ctDNA detected |
| Hata et al. [28] | 2023 | 66 | Resected | ddPCR | Single (KRAS) | Binary | Detected vs. not detected |
| Levink et al. [29] | 2023 | 26 | Diagnostic | Sequencing | Multi-locus | Binary | Mutation detection |
| Lee et al. [30] | 2024 | 128 | Advanced | ddPCR/sequencing | Single (KRAS) | Binary | Mutation detected |
| Murakami et al. [31] | 2025 | 135 | Resectable/BRPC | Sequencing | Multi-locus | Binary | ctDNA detection |
| Zhang et al. [32] | 2025 | 39 | Mixed | Tumour-informed sequencing | Multi-locus | Binary | MRD positive/negative |
| Relative | |||||||
| Kinugasa et al. [33] | 2015 | 75 | Mixed | ddPCR | Single (KRAS) | Relative | VAF |
| Takai et al. [34] | 2015 | 259 | Mixed | ddPCR + sequencing | Single (KRAS) | Relative | MAF |
| Tjensvoll et al. [35] | 2016 | 14 | Metastatic | ddPCR | Single (KRAS) | Relative | VAF dynamics |
| Berger et al. [36] | 2017 | 20 | Advanced | Sequencing | Multi-locus | Relative | CMAF |
| Pietrasz et al. [37] | 2017 | 135 | Mixed | NGS + ddPCR | Multi-locus | Relative | VAF |
| Kruger et al. [38] | 2018 | 54 | Advanced | BEAMing | Single (KRAS) | Relative | Mutation/ng |
| Perets et al. [39] | 2018 | 17 | Metastatic | NGS | Single (KRAS) | Relative | Mutant KRAS ctDNA level |
| Wang et al. [40] | 2019 | 110 | Mixed | ddPCR | Single (KRAS) | Relative | MAF |
| Wei et al. [41] | 2019 | 38 | Advanced | NGS panel | Multi-locus | Relative | MAF |
| Strijker et al. [42] | 2020 | 60 | Metastatic | Custom NGS panel | Multi-locus | Relative | ctDNA quantity/highest VAF |
| Wei et al. [43] | 2020 | 70 | Advanced/metastatic | Shallow WGS | Multi-locus | Relative | Tumour fraction (TFx) |
| Takano et al. [44] | 2021 | 24 | Mixed/diagnostic | Digital NGS | Multi-locus | Relative | MAF |
| Botrus et al. [45] | 2022 | 104 | Advanced | NGS (Guardant) | Multi-locus | Relative | DCAF/thresholded VAF |
| Lee et al. [46] | 2022 | 70 | Resectable | NGS | Multi-locus | Relative | VAF/hGE/mL |
| Sellahewa et al. [56] | 2023 | 81 | Mixed | ddPCR | Single (KRAS) | Relative | Thresholded VAF |
| Lapin et al. [47] | 2023 | 56 | Advanced | Targeted sequencing | Multi-locus | Relative | ctDNA burden |
| Tanaka et al. [48] | 2023 | 46 | Mixed | ddPCR + melting curve | Single (KRAS) | Relative | VAF |
| Huerta et al. [49] | 2024 | 80 * | Advanced | Whole exome sequencing | Single (KRAS) | Relative | VAF |
| Theparee et al. [50] | 2024 | 81 † | Mixed | Sequencing | Multi-locus | Relative | Allele fraction |
| Petersson et al. [51] | 2025 | 60 | Newly diagnosed | Targeted ctDNA assay | Multi-locus | Relative | ctDNA burden |
| Zavrtanik Čarni et al. [52] | 2025 | 50 | Resected | PCR-based | Multi-locus | Relative | VAF |
| Absolute | |||||||
| Hadano et al. [53] | 2016 | 105 | Resected | ddPCR | Single (KRAS) | Absolute | KRAS copies/mL |
| Lin et al. [54] | 2018 | 65 | Locally advanced/IRE | ddPCR | Single (KRAS) | Absolute | KRAS mutations/mL |
| Hussung et al. [55] | 2024 | 47 | Stage IV | ddPCR | Multi-locus | Absolute | Mutant copies/mL |
3.2. Evidence from Published Meta-Analyses of ctDNA in PDAC
4. Discussion
4.1. Why Pancreatic Cancer Offers a Unique Opportunity
4.2. KRAS as a Dual-Solution Calibration Axis in PDAC
- In single-locus assays, which predominantly target KRAS, absolute molecule counts replace unstable ratio-based VAF with a biologically interpretable burden metric.
- In multi-locus assays, where KRAS is almost universally included as a truncal founder mutation, explicit KRAS quantification provides a shared calibration axis that allows aggregate ctDNA metrics to be interpreted on a common biological scale.
4.3. Proposed Minimal Reporting and Calibration Framework for ctDNA in PDAC
- The total number of mutant molecules detected in the assay run (k);
- The plasma-equivalent volume represented in that run (V, mL);
- The derived concentration (k/V, mutant molecules per millilitre).
- •
- Quantifiable: ≥10 mutant molecules per run (theoretical Poisson CV ≤ ~32%);
- •
- Detectable but below the limit of quantification: 1–9 molecules;
- •
- Not detected: 0 molecules.
4.4. A Pragmatic Anchoring Strategy Using KRAS in PDAC
4.5. Implications for Interoperability and Assay Choice
4.6. Clinical Implications
4.7. Broader Relevance
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
Abbreviations
| cfDNA | Cell-free DNA |
| ctDNA | Circulating tumour DNA |
| CV | Coefficient of variation |
| ddPCR | Droplet digital polymerase chain reaction |
| LoD | Limit of detection |
| LoQ | Limit of quantification |
| MRD | Minimal residual disease |
| NGS | Next-generation sequencing |
| PDAC | Pancreatic ductal adenocarcinoma |
| PRISMA | Preferred Reporting Items for Systematic Reviews and Meta-Analyses |
| VAF | Variant allele frequency |
| cfDNA | Cell-free DNA |
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| Meta-Analysis | Main Outcomes Pooled | What was Actually Pooled? | Any Quantitative Calibration Across Studies/Platforms? | Any Absolute ctDNA Threshold Proposed? |
|---|---|---|---|---|
| Steiniche et al. [57] | Prognosis in non-resectable PDAC (OS/PFS), ctDNA kinetics | HRs for “high baseline ctDNA” and “unfavourable kinetics”; acknowledges study-specific thresholds | No | No |
| Zheng et al. [58] | Early diagnosis (stage I–II focus) | Bivariate diagnostic meta-analysis (sens/spec/DOR/AUC), includes ctDNA subgroup | No | No |
| Alqahtani et al. [59] | Prognosis in resected PDAC (OS/RFS) | HRs for KRAS-mutated ctDNA-positive vs. negative (pre-/post-op) | No | No |
| Vidal et al. [60] | Liquid biopsy around surgery (OS/DFS) | HRs based on ctDNA status shifts (−/+; +/−) | No | No |
| Bunduc et al. [61] | Prognosis: cfDNA/ctDNA markers (OS/PFS) | HRs for detectable ctDNA and KRAS mutation detection | No | No |
| Guven et al. [62] | Prognosis (localised + advanced) | HRs for ctDNA-positive vs. negative at different timepoints | No | No |
| Milin-Lazovic et al. [63] | Prognosis: cfDNA/ctDNA and KRAS | HRs for cfDNA/ctDNA positivity and KRAS presence | No | No |
| Fang et al. [64] | Prognosis (OS/PFS) | HRs for “mutations detected” and/or “high concentration” (not harmonised) | No | No |
| Zhu et al. [65] | Diagnostic value of liquid biopsy (ctDNA/CTCs/exosomes) | Pooled sensitivity/specificity/AUC for ctDNA subgroup | No | No |
| Lee et al. [66] | Prognosis in resectable PDAC | HRs for ctDNA detectable vs. not (baseline/post-op) | No | No |
| Chen et al. [67] | Prognosis in pancreatic cancer: OS, PFS, and DSS | Hazard ratios for OS/PFS/DSS according to cfDNA-related variables, including mutation status, ctDNA presence, hypermethylation, and higher cfDNA concentration | No | No |
| Borges et al. [68] | Prognosis in resected PDAC: DFS and OS in preoperative and postoperative settings; subgroup analysis by upfront surgery and neoadjuvant treatment | Hazard ratios comparing preoperative or postoperative ctDNA-positive versus ctDNA-negative patients for DFS and OS; subgroup analysis by upfront surgery and neoadjuvant treatment | No | No |
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Share and Cite
Croagh, D.; Aslani, S. Evidence Mapping of ctDNA Reporting in Pancreatic Ductal Adenocarcinoma: Toward a Shared Quantitative Language for ctDNA. Cancers 2026, 18, 1318. https://doi.org/10.3390/cancers18081318
Croagh D, Aslani S. Evidence Mapping of ctDNA Reporting in Pancreatic Ductal Adenocarcinoma: Toward a Shared Quantitative Language for ctDNA. Cancers. 2026; 18(8):1318. https://doi.org/10.3390/cancers18081318
Chicago/Turabian StyleCroagh, Daniel, and Saeed Aslani. 2026. "Evidence Mapping of ctDNA Reporting in Pancreatic Ductal Adenocarcinoma: Toward a Shared Quantitative Language for ctDNA" Cancers 18, no. 8: 1318. https://doi.org/10.3390/cancers18081318
APA StyleCroagh, D., & Aslani, S. (2026). Evidence Mapping of ctDNA Reporting in Pancreatic Ductal Adenocarcinoma: Toward a Shared Quantitative Language for ctDNA. Cancers, 18(8), 1318. https://doi.org/10.3390/cancers18081318

