Engineering Escherichia coli for Aromatic Compound Biosynthesis: Integrating Metabolic Engineering and Synthetic Biology
Abstract
1. Introduction
2. The Shikimate Pathway as a Central Platform for Aromatic Compound Biosynthesis
2.1. Architecture and Control of the SHK Pathway

2.2. Intermediates of the SHK Pathway as Precursors of Valuable Aromatic Compounds
2.3. Chorismate as a Metabolic Node for the Biosynthesis of Valuable Aromatic Compounds

3. Production of Derivatives from Aromatic Amino Acids
3.1. L-Tyrosine as a Versatile Precursor for Aromatic Compound Biosynthesis
3.1.1. Phenolic Alcohols and Glycosylated Derivatives
3.1.2. Hydroxycinnamic Acids and Related Phenylpropanoids
3.1.3. Catecholamine-Related and Neurotransmitter Precursors
3.1.4. Complex Polyphenols and Plant-Derived Metabolites

3.2. L-Phenylalanine as a Platform for the Biosynthesis of Aromatic Fine Chemicals and Phenylpropanoid Derivatives
3.2.1. Phenylpyruvate-Derived Alcohols and Organic Acids
3.2.2. Mandelate and Phenylglycine-Related Chiral Compounds
3.2.3. Cinnamic Acid-Derived Pathways and Phenylpropanoid Diversification
3.3. L-Tryptophan as a Platform for Indole-Derived Compounds and Functional Aromatic Molecules
3.3.1. Monoamine and Neurotransmitter-Related Compounds
3.3.2. Indole-Derived Pigments and Oxidative Products
3.3.3. Bisindole Compounds and Multienzyme Pathway Systems
4. Future Perspectives in the Engineering of Aromatic Compound Biosynthesis
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Tapia-Cabrera, S.M.; Escalante, A.; Bolívar, F. Engineering Escherichia coli for Aromatic Compound Biosynthesis: Integrating Metabolic Engineering and Synthetic Biology. Microbiol. Res. 2026, 17, 94. https://doi.org/10.3390/microbiolres17050094
Tapia-Cabrera SM, Escalante A, Bolívar F. Engineering Escherichia coli for Aromatic Compound Biosynthesis: Integrating Metabolic Engineering and Synthetic Biology. Microbiology Research. 2026; 17(5):94. https://doi.org/10.3390/microbiolres17050094
Chicago/Turabian StyleTapia-Cabrera, Silvana M., Adelfo Escalante, and Francisco Bolívar. 2026. "Engineering Escherichia coli for Aromatic Compound Biosynthesis: Integrating Metabolic Engineering and Synthetic Biology" Microbiology Research 17, no. 5: 94. https://doi.org/10.3390/microbiolres17050094
APA StyleTapia-Cabrera, S. M., Escalante, A., & Bolívar, F. (2026). Engineering Escherichia coli for Aromatic Compound Biosynthesis: Integrating Metabolic Engineering and Synthetic Biology. Microbiology Research, 17(5), 94. https://doi.org/10.3390/microbiolres17050094

