Phylogeography of Puumala orthohantavirus in Europe
Abstract
:1. Introduction
2. Materials and Methods
2.1. Dataset Acquisition
2.2. Phylogenetic Analyses
2.3. Phylogeographic Analyses
2.3.1. Bayesian Method
2.3.2. Maximum Likelihood Methods
2.4. Visualization and Analyses of the PUUV Dispersion Pathways
3. Results
3.1. Phylogenetic Analyses of PUUV S Segment Sequence Dataset
3.2. Phylogeographic Reconstructions
4. Discussion
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Conflicts of Interest
References
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Castel, G.; Chevenet, F.; Razzauti, M.; Murri, S.; Marianneau, P.; Cosson, J.-F.; Tordo, N.; Plyusnin, A. Phylogeography of Puumala orthohantavirus in Europe. Viruses 2019, 11, 679. https://doi.org/10.3390/v11080679
Castel G, Chevenet F, Razzauti M, Murri S, Marianneau P, Cosson J-F, Tordo N, Plyusnin A. Phylogeography of Puumala orthohantavirus in Europe. Viruses. 2019; 11(8):679. https://doi.org/10.3390/v11080679
Chicago/Turabian StyleCastel, Guillaume, François Chevenet, Maria Razzauti, Séverine Murri, Philippe Marianneau, Jean-François Cosson, Noël Tordo, and Alexander Plyusnin. 2019. "Phylogeography of Puumala orthohantavirus in Europe" Viruses 11, no. 8: 679. https://doi.org/10.3390/v11080679