Recombination Located over 2A-2B Junction Ribosome Frameshifting Region of Saffold Cardiovirus
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sample Processing
2.2. DNA Alignment
2.3. Recombination Analysis
2.4. Phylogenetic Trees and Likelihood Mapping
3. Results
3.1. Polyprotein Tree
3.2. Recombination Rates
3.3. Partitioned Trees
3.4. Mosaic Pattern
4. Discussion
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
References
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Da Costa, A.C.; Luchs, A.; Milagres, F.A.d.P.; Komninakis, S.V.; Gill, D.E.; Lobato, M.C.A.B.S.; Brustulin, R.; Das Chagas, R.T.; Abrão, M.D.F.N.d.S.; Soares, C.V.d.D.A.; et al. Recombination Located over 2A-2B Junction Ribosome Frameshifting Region of Saffold Cardiovirus. Viruses 2018, 10, 520. https://doi.org/10.3390/v10100520
Da Costa AC, Luchs A, Milagres FAdP, Komninakis SV, Gill DE, Lobato MCABS, Brustulin R, Das Chagas RT, Abrão MDFNdS, Soares CVdDA, et al. Recombination Located over 2A-2B Junction Ribosome Frameshifting Region of Saffold Cardiovirus. Viruses. 2018; 10(10):520. https://doi.org/10.3390/v10100520
Chicago/Turabian StyleDa Costa, Antônio Charlys, Adriana Luchs, Flávio Augusto de Pádua Milagres, Shirley Vasconcelos Komninakis, Danielle Elise Gill, Márcia Cristina Alves Brito Sayão Lobato, Rafael Brustulin, Rogério Togisaki Das Chagas, Maria De Fátima Neves dos Santos Abrão, Cassia Vitória de Deus Alves Soares, and et al. 2018. "Recombination Located over 2A-2B Junction Ribosome Frameshifting Region of Saffold Cardiovirus" Viruses 10, no. 10: 520. https://doi.org/10.3390/v10100520