Genetic Parameter Estimates for the Growth and Morphological Traits of Castanopsis hystrix Families and the Genotype × Environment Interaction Effects
Abstract
:1. Introduction
2. Materials and Methods
2.1. C. hystrix Families and Layout of the Experimental Forests
2.2. Overview of the Experimental Sites
2.3. Determination of Traits
2.4. Data Analysis
2.4.1. Estimation of Genetic Parameters
Estimations of Single-Location Genetic Variance and Heritability
Estimation of Multiple-Location Genetic Variance and Heritability
Estimation of the Genetic Coefficient of Variances and Environmental Coefficient Variances
Estimation of Genetic Gains
2.4.2. BLUP–GGE Analysis of the Growth and Morphological Traits
3. Results
3.1. Genetic Variances in the Growth Traits of C. hystrix
3.2. Genetic Variances in the Morphological Traits of C. hystrix
3.3. Estimating the Genetic Parameters for the Growth and Morphological Traits of C. hystrix
3.4. BLUP
3.5. GGE-BLUP
4. Discussion
5. Conclusions
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Family Codes | Provenance | Latitude (N) | Longitude (E) | Altitude (m) | Average Annual Temperature (°C) | Average Annual Rainfall (mm) |
---|---|---|---|---|---|---|
1 | Bobai | 22°16′–22°28′ | 109°32′–111°17′ | 290 | 21.9 | 1756.0 |
2–7 | Donglan | 24°10′–24°30′ | 107°05′–107°43′ | 294 | 20.1 | 1546.0 |
8–13 | Pubei | 22°14′–22°41′ | 109°13′–109°14′ | 230 | 21.5 | 1757.4 |
14–18 | Rong County | 22°28′–23°08′ | 110°15′–110°53′ | 214 | 21.3 | 1660.0 |
19–21 | PX | 21°51′–22°08′ | 106°41′–106°59′ | 300 | 21.3 | 1376.5 |
Experimental Site | Latitude (N) | Longitude (E) | Altitude (m) | Soil (g/kg) | Temperature (°C) | Average Annual Rainfall (mm) | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
pH | Hydrolysis (N) | Fast-Acting (p) | Fast-Acting (K) | Average | Extreme Low | Extreme High | Cumulative (>10 °C) | |||||
YL | 22°48′ | 110°28′ | 178 | 4.10 | 157.8 | 1.65 | 22.12 | 22.7 | −2.3 | 36.8 | 7175.7 | 1698.9 |
LZ | 24°13′ | 109°07′ | 149 | 6.07 | 78.06 | 3.60 | 31.26 | 21.9 | −8.0 | 38.9 | 6642.9 | 1345.0 |
PX | 22°17′ | 106°42′ | 550 | 4.25 | 160.05 | 2.52 | 20.37 | 20.2 | 6.2 | 34.2 | 7575.5 | 1376.5 |
Site | Source | Degrees of Freedom | Tree Height | DBH | V | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Sum of Squares | F | p | Sum of Squares | F | p | Sum of Squares | F | p | |||
YL | Block | 2 | 33.14 | 4.13 * | 0.0018 | 131.00 | 6.07 ** | 0.003 | 0.073 | 6.46 ** | 0.002 |
Family | 20 | 31.71 | 3.94 ** | <0.001 | 59.91 | 2.78 ** | <0.001 | 0.031 | 2.75 ** | <0.001 | |
Interaction effect | 40 | 12.22 | 1.52 * | 0.041 | 32.00 | 1.48 | 0.052 | 0.002 | 1.36 | 0.103 | |
Error | 126 | 8.02 | 21.57 | 0.011 | |||||||
Total | 188 | 11.70 | 29.03 | 0.015 | |||||||
LZ | Block | 2 | 86.30 | 11.26 ** | <0.001 | 13.79 | 6.78 ** | 0.002 | 0.038 | 9.29 ** | <0.001 |
Family | 20 | 34.84 | 4.55 ** | <0.001 | 6.43 | 3.16 ** | <0.001 | 0.015 | 3.76 ** | <0.001 | |
Interaction effect | 40 | 13.93 | 1.82 ** | 0.007 | 4.9 | 2.01 ** | 0.002 | 0.007 | 1.83 ** | 0.006 | |
Error | 126 | 7.67 | 2.03 | 0.004 | |||||||
Total | 188 | 12.72 | 3.06 | 0.006 | |||||||
PX | Block | 2 | 20.25 | 2.45 ** | 0.002 | 344.12 | 20.36 ** | <0.001 | 0.052 | 1.70 * | 0.002 |
Family | 20 | 145.22 | 17.6 ** | <0.001 | 30.35 | 1.80 ** | 0.030 | 0.784 | 26.62 ** | <0.001 | |
Interaction effect | 40 | 9.70 | 1.18 | 0.254 | 22.65 | 1.34 | 0.120 | 0.037 | 1.22 | 0.254 | |
Error | 126 | 14.95 | 20.94 | 0.030 | |||||||
Total | 188 | 14.76 | 13.31 | 0.036 |
Family | Tree Height | DBH | V | ||||||
---|---|---|---|---|---|---|---|---|---|
YL | LZ | PX | YL | LZ | PX | YL | LZ | PX | |
1 | 10.54 | 20.80 | 16.87 | 10.96 | 15.28 | 18.84 | 0.05 | 0.24 | 0.22 |
2 | 12.39 | 14.37 | 20.37 | 15.93 | 13.38 | 24.81 | 0.13 | 0.10 | 0.48 |
3 | 12.58 | 14.04 | 15.89 | 17.18 | 13.92 | 19.26 | 0.17 | 0.10 | 0.24 |
4 | 12.91 | 14.94 | 17.94 | 12.27 | 12.94 | 22.51 | 0.08 | 0.11 | 0.33 |
5 | 11.66 | 18.09 | 16.93 | 12.13 | 14.67 | 21.63 | 0.07 | 0.18 | 0.33 |
6 | 12.47 | 17.67 | 17.14 | 13.42 | 13.97 | 21.37 | 0.09 | 0.16 | 0.31 |
7 | 12.08 | 15.61 | 19.01 | 14.19 | 14.63 | 24.40 | 0.11 | 0.14 | 0.43 |
8 | 12.29 | 16.17 | 15.89 | 13.26 | 14.80 | 18.96 | 0.08 | 0.14 | 0.22 |
9 | 12.37 | 16.67 | 18.39 | 14.73 | 13.83 | 21.64 | 0.11 | 0.14 | 0.30 |
10 | 15.23 | 18.33 | 19.26 | 18.07 | 15.00 | 21.67 | 0.20 | 0.17 | 0.31 |
11 | 11.00 | 19.73 | 18.49 | 12.22 | 14.00 | 23.75 | 0.07 | 0.19 | 0.37 |
12 | 15.23 | 15.17 | 18.77 | 15.92 | 14.22 | 22.98 | 0.16 | 0.12 | 0.34 |
13 | 11.83 | 18.86 | 19.00 | 13.76 | 15.50 | 23.58 | 0.10 | 0.20 | 0.41 |
14 | 13.46 | 19.62 | 19.96 | 17.61 | 13.78 | 25.08 | 0.15 | 0.20 | 0.45 |
15 | 13.77 | 16.73 | 19.28 | 17.24 | 14.28 | 23.11 | 0.19 | 0.15 | 0.39 |
16 | 12.93 | 18.20 | 20.04 | 14.60 | 14.67 | 22.19 | 0.11 | 0.17 | 0.38 |
17 | 11.02 | 17.60 | 20.56 | 11.08 | 14.94 | 23.38 | 0.07 | 0.17 | 0.40 |
18 | 12.31 | 16.01 | 22.24 | 11.89 | 13.28 | 25.14 | 0.06 | 0.12 | 0.51 |
19 | 10.20 | 18.17 | 20.03 | 14.09 | 15.98 | 24.11 | 0.11 | 0.19 | 0.43 |
20 | 14.73 | 19.74 | 19.03 | 16.88 | 15.11 | 24.03 | 0.18 | 0.21 | 0.42 |
21 | 18.41 | 19.98 | 19.50 | 20.53 | 16.06 | 22.37 | 0.29 | 0.23 | 0.39 |
Total | 12.83 | 17.44 | 18.73 | 14.67 | 14.49 | 22.58 | 0.12 | 0.16 | 0.36 |
Source | Degrees of Freedom | Tree Height | DBH | V | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Sum of Squares | F | p | Sum of Squares | F | p | Sum of Squares | F | p | ||
Site | 2 | 2153.50 | 112.49 ** | <0.001 | 8791.07 | 433.48 ** | <0.001 | 6.48 | 281.49 ** | <0.001 |
Site × Block | 6 | 1098.87 | 19.13 ** | <0.001 | 1532.01 | 25.18 ** | <0.001 | 2.49 | 36.11 ** | <0.001 |
Family | 20 | 627.31 | 3.28 ** | <0.001 | 626.66 | 3.09 ** | <0.001 | 0.74 | 3.22 ** | <0.001 |
Site × Family | 39 | 917.76 | 2.46 ** | <0.001 | 875.89 | 2.21 ** | <0.001 | 0.71 | 1.58 ** | 0.018 |
Site × Block × Family | 118 | 1890.67 | 1.67 ** | <0.001 | 2128.43 | 1.78 ** | <0.001 | 2.36 | 1.74 ** | 0.001 |
Error | 381 | 3646.86 | 3863.42 | 4.38 | ||||||
Total | 566 | 10,335.00 | 17,817.50 | 17.15 |
Site | Source | Degrees of Freedom | HCB | CW | Branch Angle | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Sum of Squares | F | p | Sum of Squares | F | p | Sum of Squares | F | p | |||
YL | Block | 2 | 117.96 | 17.71 ** | <0.001 | 2.74 | 9.79 ** | <0.001 | 1012.0 | 0.2 | 0.822 |
Family | 20 | 179.16 | 2.69 ** | <0.001 | 7.74 | 2.76 ** | <0.001 | 52,837.0 | 1.02 | 0.438 | |
Interaction effect | 40 | 229.11 | 1.72 ** | 0.012 | 9.96 | 1.78 ** | 0.009 | 106,135.0 | 1.03 | 0.437 | |
Error | 126 | 419.49 | 17.63 | 324,763.0 | |||||||
Total | 188 | 945.73 | 38.07 | 484,747.0 | |||||||
LZ | Block | 2 | 29.06 | 7.03 ** | 0.001 | 0.20 | 0.07 | 0.934 | 342.7 | 1.16 | 0.318 |
Family | 20 | 73.39 | 1.77 * | 0.03 | 24.33 | 0.83 | 0.678 | 2169.0 | 0.73 | 0.786 | |
Interaction effect | 40 | 94.96 | 1.15 | 0.278 | 33.69 | 0.57 | 0.978 | 5528.8 | 0.93 | 0.588 | |
Error | 126 | 260.5 | 185.50 | 18,660.0 | |||||||
Total | 188 | 457.91 | 243.72 | 26,700.6 | |||||||
PX | Block | 2 | 23.40 | 12.27 ** | <0.001 | 0.40 | 0.94 | 0.394 | 631.2 | 1.24 | 0.293 |
Family | 20 | 33.06 | 1.73 * | 0.036 | 5.33 | 1.25 | 0.225 | 3470.8 | 0.68 | 0.839 | |
Interaction effect | 40 | 41.93 | 1.1 | 0.339 | 6.51 | 0.76 | 0.836 | 7320.2 | 0.72 | 0.886 | |
Error | 126 | 120.19 | 26.86 | 32,107.3 | |||||||
Total | 188 | 218.59 | 39.10 | 43,529.5 |
Family | HCB | CW | Branch Angle | ||||||
---|---|---|---|---|---|---|---|---|---|
YL | LZ | PX | YL | LZ | PX | YL | LZ | PX | |
1 | 4.93 | 6.53 | 8.11 | 1.40 | 2.22 | 2.47 | 45.22 | 32.78 | 57.67 |
2 | 4.21 | 6.69 | 8.29 | 1.27 | 2.83 | 2.10 | 43.56 | 32.33 | 61.22 |
3 | 4.49 | 6.48 | 8.12 | 1.11 | 2.83 | 2.56 | 45.89 | 23.56 | 54.22 |
4 | 6.08 | 5.16 | 8.31 | 1.19 | 3.17 | 2.15 | 50.44 | 35.67 | 67.89 |
5 | 7.58 | 4.94 | 8.97 | 1.40 | 2.17 | 2.46 | 59.00 | 27.78 | 59.00 |
6 | 7.28 | 5.70 | 8.21 | 1.15 | 2.50 | 2.23 | 52.22 | 28.89 | 63.11 |
7 | 7.12 | 5.69 | 8.63 | 1.33 | 3.00 | 2.25 | 65.11 | 28.22 | 54.00 |
8 | 6.89 | 6.46 | 8.47 | 1.42 | 2.67 | 1.95 | 51.11 | 28.33 | 61.89 |
9 | 5.24 | 5.51 | 9.34 | 1.34 | 3.61 | 2.27 | 52.78 | 28.56 | 53.78 |
10 | 6.47 | 4.68 | 8.20 | 1.52 | 2.83 | 2.35 | 50.56 | 28.11 | 61.33 |
11 | 7.30 | 6.60 | 8.67 | 1.84 | 3.22 | 2.08 | 52.33 | 33.89 | 54.89 |
12 | 7.06 | 4.99 | 8.48 | 1.61 | 2.50 | 2.17 | 47.00 | 32.78 | 61.00 |
13 | 6.98 | 5.53 | 8.18 | 1.21 | 2.78 | 2.31 | 41.56 | 27.56 | 50.44 |
14 | 8.34 | 4.91 | 8.78 | 1.96 | 2.94 | 2.27 | 46.00 | 25.89 | 54.56 |
15 | 4.96 | 5.86 | 8.44 | 1.34 | 2.72 | 2.30 | 44.44 | 22.33 | 60.00 |
16 | 6.21 | 4.71 | 7.57 | 1.33 | 2.72 | 2.14 | 42.78 | 29.89 | 56.11 |
17 | 5.52 | 5.42 | 7.92 | 1.28 | 2.89 | 2.12 | 42.56 | 26.67 | 57.89 |
18 | 4.53 | 6.21 | 8.17 | 1.29 | 2.56 | 2.36 | 39.67 | 27.11 | 65.44 |
19 | 3.84 | 5.59 | 8.90 | 1.33 | 3.33 | 2.36 | 42.67 | 34.22 | 61.33 |
20 | 5.06 | 5.56 | 9.19 | 1.36 | 2.33 | 2.48 | 44.44 | 27.11 | 61.00 |
21 | 4.61 | 5.89 | 8.18 | 1.71 | 2.39 | 2.64 | 51.11 | 30.89 | 63.33 |
Total | 5.94 | 5.67 | 8.43 | 1.4 | 2.77 | 2.29 | 48.12 | 29.17 | 59.05 |
Source | Degrees of Freedom | HCB | CW | Branch Angle | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Sum of Square | F | p | Sum of Square | F | p | Sum of Square | F | p | ||
Site | 2 | 878.00 | 207.38 ** | <0.001 | 183.5 | 150.80 ** | 0.001 | 91,473.8 | 46.04 ** | <0.001 |
Site × Block | 6 | 170.43 | 13.42 ** | <0.001 | 3.34 | 0.92 | 0.484 | 1985.5 | 0.33 | 0.919 |
Family | 20 | 85.59 | 2.02 ** | 0.006 | 8.96 | 0.74 | 0.788 | 23,519.8 | 1.18 | 0.265 |
Site × F | 40 | 200.03 | 2.36 ** | <0.001 | 28.43 | 1.17 | 0.230 | 34,957.5 | 0.88 | 0.681 |
Site × Block × Family | 120 | 366.00 | 1.44 ** | 0.005 | 50.16 | 0.69 | 0.992 | 118,984.3 | 1.00 | 0.495 |
Error | 378 | 800.18 | 229.99 | 375,530.0 | ||||||
Total | 566 | 2500.22 | 504.39 | 646,450.9 |
Site | Trait | CVg | CVe | ||||
---|---|---|---|---|---|---|---|
YL | Tree height | 2.17 | 1.4 | 8.02 | 11.47 | 22.07 | 0.78 |
DBH | 3.1 | 3.48 | 21.57 | 12.01 | 31.66 | 0.67 | |
V | 0.0017 | 0.0013 | 0.0112 | 34.21 | 88.19 | 0.74 | |
HCB | 0.359 | 0.799 | 3.329 | 10.09 | 30.72 | 0.53 | |
LZ | Tree height | 0.28 | 0.73 | 1.96 | 3.04 | 8.03 | 0.5 |
DBH | 2.26 | 2.35 | 7.36 | 10.37 | 18.49 | 0.72 | |
V | 0.00084 | 0.00121 | 0.00402 | 17.88 | 39.63 | 0.64 | |
HCB | 0.17 | nsf | 2.141 | 7.27 | 25.81 | 0.83 | |
PX | Tree height | 1.26 | 0.55 | 5.25 | 3.79 | 12.23 | 0.83 |
DBH | 0.68 | 2.19 | 16.9 | 9.22 | 18.21 | 0.41 | |
V | 0.00156 | 0.00258 | 0.03059 | 18.11 | 48.58 | 0.54 | |
HCB | 0.0752 | nsf | 0.977 | 3.25 | 11.73 | 0.83 |
Trait | CVg | CVe | |||||
---|---|---|---|---|---|---|---|
Tree height | 0.30 | 2.11 | 0.82 | 9.60 | 3.38 | 18.96 | 0.35 |
DBH | 0.31 | 2.59 | 0.48 | 10.14 | 3.23 | 18.46 | 0.38 |
V | 0.0071 | 0.00022 | 0.00273 | 0.0116 | 12.49 | 50.49 | 0.62 |
HCB | 0.027 | 0.311 | 0.217 | 2.117 | 2.46 | 21.78 | 0.19 |
Family | YL | LZ | PX | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
H | DBH | V | HCB | H | DBH | V | HCB | H | DBH | V | HCB | |
1 | −1.652 | −2.21 | −0.044 | −0.247 | 2.466 | 0.46 | 0.049 | 0.359 | −1.121 | −1.558 | −0.06 | −0.132 |
2 | −0.315 | 0.813 | 0.005 | −0.009 | −2.256 | −0.645 | −0.044 | 0.424 | 0.983 | 0.947 | 0.049 | −0.06 |
3 | −0.213 | 1.503 | 0.029 | −0.328 | −2.493 | −0.328 | −0.045 | 0.336 | −1.709 | −1.386 | −0.049 | −0.128 |
4 | 0.061 | −1.434 | −0.027 | −0.711 | −1.832 | −0.897 | −0.039 | −0.215 | −0.473 | −0.019 | −0.013 | −0.05 |
5 | −0.839 | −1.514 | −0.032 | −0.122 | 0.476 | 0.105 | 0.01 | −0.303 | −1.081 | −0.387 | −0.012 | 0.218 |
6 | −0.259 | −0.743 | −0.022 | −0.379 | 0.166 | −0.302 | 0.001 | 0.012 | −0.954 | −0.499 | −0.02 | −0.091 |
7 | −0.537 | −0.278 | −0.009 | −0.541 | −1.343 | 0.086 | −0.019 | 0.007 | 0.168 | 0.774 | 0.026 | 0.081 |
8 | −0.386 | −0.843 | −0.023 | −0.034 | −0.593 | 0.137 | −0.01 | 0.327 | −1.79 | −1.506 | −0.061 | 0.013 |
9 | −0.331 | 0.051 | −0.005 | −0.178 | −0.764 | −0.089 | −0.013 | −0.067 | −0.206 | −0.383 | −0.024 | 0.372 |
10 | 1.72 | 2.035 | 0.045 | −0.247 | 0.329 | 0.04 | 0.001 | −0.414 | 0.411 | −0.214 | −0.013 | −0.096 |
11 | −1.308 | −1.461 | −0.034 | −0.422 | 1.683 | −0.283 | 0.021 | 0.387 | −0.121 | 0.44 | 0.001 | 0.095 |
12 | 1.72 | 0.752 | 0.023 | 0.724 | −1.669 | −0.154 | −0.03 | −0.284 | 0.178 | 0.219 | −0.003 | 0.018 |
13 | −0.712 | −0.544 | −0.016 | −0.303 | 1.038 | 0.59 | 0.024 | −0.058 | 0.161 | 0.429 | 0.02 | −0.105 |
14 | 0.548 | 1.762 | 0.019 | 0.173 | 1.601 | −0.412 | 0.023 | −0.317 | 0.724 | 0.958 | 0.031 | 0.141 |
15 | 0.671 | 1.543 | 0.04 | 0.505 | −0.519 | −0.121 | −0.007 | 0.077 | 0.328 | 0.233 | 0.011 | 0.004 |
16 | 0.075 | −0.039 | −0.006 | 0.204 | 0.557 | 0.105 | 0.005 | −0.4 | 0.687 | −0.104 | 0.008 | −0.355 |
17 | −1.292 | −2.145 | −0.031 | −0.078 | 0.117 | 0.266 | 0.004 | −0.104 | 1.147 | 0.448 | 0.019 | −0.21 |
18 | −0.37 | −1.66 | −0.036 | 0.718 | −1.049 | −0.703 | −0.026 | 0.225 | 1.641 | 0.722 | 0.042 | −0.11 |
19 | −1.88 | −0.298 | −0.009 | −0.792 | 0.533 | 0.867 | 0.022 | −0.034 | 0.623 | 0.51 | 0.023 | 0.191 |
20 | 1.362 | 1.324 | 0.033 | 0.442 | 1.691 | 0.363 | 0.03 | −0.048 | 0.244 | 0.653 | 0.025 | 0.309 |
21 | 3.993 | 3.51 | 0.101 | 1.626 | 1.862 | 0.913 | 0.046 | 0.091 | 0.16 | −0.276 | −0.001 | −0.105 |
Family | H (m) | DBH (cm) | V (cm3) | HCB (m) | Coefficient of Advantages | Rank |
---|---|---|---|---|---|---|
21 | 19.30 | 22.99 | 0.30 | 6.23 | 0.0001 | 1 |
20 | 17.83 | 18.67 | 0.27 | 6.60 | 0.1595 | 2 |
14 | 17.68 | 18.82 | 0.27 | 7.34 | 0.2292 | 3 |
10 | 17.61 | 18.25 | 0.23 | 6.45 | 0.3262 | 4 |
Average value of selected families | 18.10 | 19.68 | 0.27 | 6.66 | ||
Group average | 16.33 | 17.25 | 0.21 | 6.68 | ||
Genetic gains (%) | 21.29 | 22.92 | 21.25 | −0.14 |
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Liu, G.; Tian, Z.; Jia, H.; Shen, W.; Li, Z.; Tang, L.; Zhao, H.; Xu, J. Genetic Parameter Estimates for the Growth and Morphological Traits of Castanopsis hystrix Families and the Genotype × Environment Interaction Effects. Forests 2023, 14, 1619. https://doi.org/10.3390/f14081619
Liu G, Tian Z, Jia H, Shen W, Li Z, Tang L, Zhao H, Xu J. Genetic Parameter Estimates for the Growth and Morphological Traits of Castanopsis hystrix Families and the Genotype × Environment Interaction Effects. Forests. 2023; 14(8):1619. https://doi.org/10.3390/f14081619
Chicago/Turabian StyleLiu, Guangjin, Zuwei Tian, Hongyan Jia, Wenhui Shen, Zuhe Li, Li Tang, Hongpeng Zhao, and Jianmin Xu. 2023. "Genetic Parameter Estimates for the Growth and Morphological Traits of Castanopsis hystrix Families and the Genotype × Environment Interaction Effects" Forests 14, no. 8: 1619. https://doi.org/10.3390/f14081619
APA StyleLiu, G., Tian, Z., Jia, H., Shen, W., Li, Z., Tang, L., Zhao, H., & Xu, J. (2023). Genetic Parameter Estimates for the Growth and Morphological Traits of Castanopsis hystrix Families and the Genotype × Environment Interaction Effects. Forests, 14(8), 1619. https://doi.org/10.3390/f14081619