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Article

Synthesis and Neurotropic Activity of New 5-Piperazinopyrazolo[3,4-c]-2,7-naphthyridines and Isoxazolo[5,4-c]-2,7-naphthyridines

by
Samvel N. Sirakanyan
1,
Elmira K. Hakobyan
1,*,
Athina Geronikaki
2,*,
Domenico Spinelli
3,†,
Anthi Petrou
2,
Victor G. Kartsev
4,
Hasmik A. Yegoryan
1,
Hasmik V. Jughetsyan
1,
Mariam E. Manukyan
1,
Ruzanna G. Paronikyan
1,
Tatevik A. Araqelyan
1 and
Anush A. Hovakimyan
1
1
Scientific Technological Center of Organic and Pharmaceutical Chemistry of National Academy of Science of Republic of Armenia, Institute of Fine Organic Chemistry of A.L. Mnjoyan, Yerevan 0014, Armenia
2
Department of Pharmacy, School of Health, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece
3
Dipartimento di Chimica G. Ciamician, Alma Mater Studiorum-Università di Bologna, Via F. Selmi 2, 40126 Bologna, Italy
4
InterBioScreen, Moscow 119019, Russia
*
Authors to whom correspondence should be addressed.
Dead. We dedicate this paper to our good friend and collaborator Prof. Domenico Spinelli, who passed away on 21 March 2025.
Pharmaceuticals 2025, 18(4), 597; https://doi.org/10.3390/ph18040597
Submission received: 25 March 2025 / Revised: 12 April 2025 / Accepted: 16 April 2025 / Published: 19 April 2025
(This article belongs to the Special Issue Pyrazole and Thiazole Derivatives in Medicinal Chemistry)

Abstract

:
Background/Objectives: Approximately 1% of people worldwide suffer from epilepsy. The development of safer and more effective antiepileptic medications (AEDs) is still urgently needed because all AEDs have some unwanted side effects and roughly 30% of epileptic patients cannot stop having seizures when taking current AEDs. It should be noted that the derivatives of pyrazolo[3,4-b]pyridine are important core structures in many drug substances. The aim of this study is to synthesize new derivatives of piperazino-substituted pyrazolo[3,4-c]-2,7-naphthyridines and 9,11-dimethylpyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines for the evaluation of their neurotropic activity. Methods: The synthesis of the target compounds was performed starting from 1-amino-3-chloro-2,7-naphthyridines and using well-known methods. The structures of all the synthesized compounds were confirmed by spectroscopic data. Compounds were studied for their potential neurotropic activities (anticonvulsant, sedative, anti-anxiety, and antidepressive), as well as side effects, in 450 white mice of both sexes and 50 male Wistar rats. The anticonvulsant effect of the newly synthesized compounds was investigated by using the following tests: pentylenetetrazole, thiosemicarbazide-induced convulsions, and maximal electroshock. The psychotropic properties of the selected compounds were evaluated by using the following tests: the Open Field test, the Elevated Plus Maze (EPM), the Forced Swimming test, and Rotating Rod Test to study muscle relaxation. For the docking studies, AutoDock 4 (version 4.2.6) was used, as well as the structures of the GABAA receptor (PDB ID: 4COF), the SERT transporter (PDB ID: 3F3A), and the 5-HT1A receptor (PDB ID: 3NYA) obtained from the Protein Data Bank. Results: A series of piperazino-substituted pyrazolo[3,4-c]-2,7-naphthyridines (3aj) and 9,11-dimethylpyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines (4aj), as well as new heterocyclic systems, i.e., isoxazolo[5,4-c]-2,7-naphthyridines 6ad, were synthesized and evaluated for their neurotropic activity. The investigation showed that some of these compounds (3a,b,d,fi and 4a,d,f,i) display high anticonvulsant activity, especially in the test of antagonism with pentylenetetrazol, surpassing the well-known antiepileptic drug ethosuximide. Thus, the most active compounds in the pentylenpotetrazole test are 3h, 3i, and 4i; the ED50 of compound 4i is 23.8, and the therapeutic index is more than 33.6, which is the highest among these three active compounds. On the other hand, they simultaneously exhibit psychotropic (anxiolytic, antidepressant, or sedative) or behavioral depressant) effects. The effective compounds do not cause myorelaxation at the tested doses and have high therapeutic indices. Docking on the most active compounds, i.e., 3h, 3i, and 4i, is in agreement with the experimental results. Conclusions: The studies reveled that some of these compounds (3i, 4a, and 4i) display high anticonvulsant and psychotropic activities. The most active compounds contained methyl and diphenylmethyl groups in the piperazine ring. The docking studies identified compounds 3i, 4i, and 4a as the most potent anticonvulsants, showing strong affinity for GABAA, 5-HT1A receptors, and the SERT transporter. Notably, compound 4i formed two hydrogen bonds with Thr176 and Arg180 on GABAA and exhibited a binding energy (−8.81 kcal/mol) comparable to that of diazepam (−8.90 kcal/mol). It also showed the strongest binding to SERT (−7.28 kcal/mol), stabilized by interactions with Gly439, Ile441, and Arg11. Furthermore, 4i displayed the best docking score with 5-HT1A (−9.10 kcal/mol) due to multiple hydrogen bonds and hydrophobic interactions, supporting its potential as a dual-acting agent targeting both SERT and 5-HT1A.

1. Introduction

There are 4.6 million new cases of epilepsy worldwide each year. Safer, less toxic, and more effective antiepileptic drugs are urgently needed for patients with difficult-to-control seizures. The available drugs are symptomatically effective in only 60–70% of patients [1]. The primary tasks of the modern stage of epilepsy and epileptic syndromes are the nationwide introduction of new antiepileptic drugs (AEDs) with innovative mechanisms of action on the “target” of the pathological epileptic system and the use of new AEDs not only as an additional therapy for drug-resistant epilepsy but perhaps also for a faster transition to new forms of drugs in the earliest stages of ineffective treatment with basic drugs [2,3].
In the search for new neurotropic compounds in experimental psychopharmacology, it seems important and relevant to use animal models of both the pathology itself and its individual manifestations. Recently, in the treatment of antiepileptic drugs, mainly of the second generation, there is a tendency to optimize treatment aimed at the use of anticonvulsants with extended combined properties [4]. One of the leading tasks in this direction is the search for substances suitable not only for the treatment of mental disorders but also for the prevention of stressful situations and functional overloads in healthy people.
Recent literature data confirmed that pyrazolo[3,4-b]pyridine derivatives are important core structures in many drug substances [5,6,7,8,9,10,11,12,13,14]. This heterocyclic structure has always been the focus of attention of synthetic organic chemists, who have always been looking for new and effective methods for synthesizing this class of compounds [14,15,16,17]. Up to now, a very large number of pyrazole derivatives have been synthesized and evaluated for their biological activity [18,19]. In particular, pyrazolo[3,4-b]pyridine derivatives have been reported as potent antitumor [5,6,7], antimicrobial [7,8,9,10], anti-inflammatory [14], and nervous system agents [14]. A recent review of the biomedical applications of 1H-pyrazolo[3,4-b]pyridines has highlighted the importance of this class of compounds in medicinal and pharmaceutical chemistry [14].
On the other hand, it should be noted that compounds with a 2,7-naphthyridine scaffold have a wide spectrum of biological activity, especially cytotoxic and antitumor activities, as reported by a recent review [20]. Some of these compounds are also potent and selective inhibitors of various enzymes and kinases [21,22,23]. However, until now, the 2,7-naphthyridine derivatives 1,2,4-triazolo[3,4-a]-2,7-naphthyridines I and pyrazolo[3,4-c]-2,7-naphthyridines II, with neurotrophic activity, have been reported only by us (Figure 1) [24,25].
Literature data showed that isoxazolo[5,4-c]pyridines and their derivatives are compounds with high biological potential [26,27,28,29]. It should be noted that these compounds are very close in their structure to pyrazolo[3,4-c]pyridines: isoxazolo[5,4-c]pyridines, instead of a nitrogen atom, contain an oxygen atom. Considering this, it was very interesting from both biological and theoretical points of view to synthesize this type of compounds.
Thus, based on the above information and the fact that antiepileptic drugs have many side effects, herein, we report the synthesis of several new pyrazolo[3,4-b]pyridines, their fused derivatives (pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines), and new heterocyclic systems (isoxazolo[5,4-c]-2,7-naphthyridines), with the aim of identifying more active and less neurotoxic and toxic substances.

2. Results and Discussion

2.1. Chemistry

The synthetic procedures for the synthesis of compounds such as pyrazolo[3,4-c]-2,7-naphthyridines and 9,11-dimethylpyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines were well developed and reported by us previously [30,31]. 1,3-Dichloro-2,7-naphthyridines 1 [32] were reacted with substituted piperazines in absolute ethanol, thus leading to the substitution of the chlorine atom at the first position of the 2,7-naphthyridine ring with the formation of 3-chloro-2,7-naphthyridines 2aj in high yields: Y = 70–8% (Scheme 1). It should be noted that previously, we carried out ESP charge calculations for compounds 1ac involved in the SNAr reactions, and the studies revealed a negligible difference between the charges of the two carbon atoms bound to the chlorine atoms, so the different reactivity of the two sites in the 2,7-naphthyridine ring can be explained only by the steric hindrance caused by the cyano group [33].
Further, the reaction of compounds 2 and hydrazine hydrate in butanol under reflux was carried out. Thus, by primarily using hydrazine, we made a nucleophilic substitution of the chlorine atom at the third position of the 2,7-naphthyridine ring, followed by intramolecular cyclization, leading to the corresponding 7-R-5-(4-R1piperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-11-amines 3aj in high yields: Y = 76–88% (Scheme 1 and Table 1).
Based on these newly synthesized pyrazolo[3,4-c]-2,7-naphthyridines, a pyrimidine ring was constructed via a condensation/cyclization process known as the Knorr synthesis of pyrazoles [34]. Thus, the treatment of pyrazolo[3,4-c]-2,7-naphthyridines 3 with acetylacetone [31,35] afforded tetracyclic 3-R-9,11-dimethyl-5-(4-R1piperazin-1-yl)1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4aj in moderate yields: Y = 67–72% (Scheme 1 and Table 1).
The structures of the obtained compounds 2, 3, and 4 were confirmed by NMR, IR, and MS spectroscopic data and by elemental analysis. The IR spectra of compound 3 did not show the characteristic absorption bands of the cyano group in the region at ν 2215–2221 cm−1, thus confirming the cyclization process, and in the 1H NMR spectra, the protons of the NH and NH2 groups were present at 11.30–11.42 ppm and 4.47–4.54 ppm, respectively.
As expected, in the IR spectra of compounds 4, the absorption bands of the NH and NH2 groups were absent, while in the 1H NMR spectra of these compounds, the protons of two singlet methyl groups at 2.61–2.67 ppm and 2.83–2.90 ppm and one CH singlet proton at 6.98–7.27 ppm were observed, proving the cyclization process.
By continuing our work, we have also succeeded at synthesizing new heterocyclic systems: isoxazolo[5,4-c]-2,7-naphthyridines 6ad. Thus, 7-R-1-amino-3-chloro-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitriles 5ad [33] were reacted with hydroxylamine hydrochloride in absolute ethanol in the presence of sodium ethoxide [26,27]. The coupling reaction between the cyano group and hydroxylamine occurred with the formation of an intermediate product: amidoxims I. Then, as a result of the intramolecular cyclization, new heterocyclic systems, i.e., isoxazolo[5,4-c]-2,7-naphthyridines 6ad, were formed in moderate yields (Scheme 2 and Table 2).
As in the previous two cases (compounds 3 and 4), here too, the IR spectra provide primarily important information about the structure of the obtained compounds. Thus, the infrared spectra of compounds 6ad demonstrated the absorption bands at 3205–3468 cm−1 typical of the amino group, while the strong absorption bands of the cyano substituent were missing, thus proving that the cyclization process had occurred. In the 1H NMR spectra, the singlet signals of the NH2 group at 5.35–5.54 ppm were observed. The structures of these new systems were also supported by the 13C NMR spectra and MS data and are in agreement with the proposed structures.

2.2. Biological Evaluation

2.2.1. Evaluation of Anticonvulsant Activity

All twenty synthesized compounds were evaluated for possible anticonvulsant activity [36,37,38,39,40]. The evaluation revealed that they exhibit variable degrees of antagonism against pentylenetetrazole (PTZ) varying between 20% and 80%. Compounds 3a,b,d,fi and 4a,d,f,i with the prevention of 60–80% of pentylenetetrazole seizures at a dose of 50 mg/kg, appeared to be the most active. The rest of the compounds (3c,e,j; 4b,c,e,g,h,j; and 6ad) showed up to 20–40% activity and were not further studied.
The data on the anticonvulsant activity of the eleven most active compounds and the reference drugs ethosuximide and diazepam [41,42] in mice are shown in Table 1. The evaluation revealed that the studied compounds exhibit greater anticonvulsant activity against pentylenetetrazole compared with ethosuximide but are less effective than diazepam. However, unlike diazepam, these compounds do not induce muscle relaxation [43] at the studied doses of 12.5, 50, and 200 mg/kg. Their therapeutic indexes (TIs) are significantly higher than that of the reference drug, ethosuximide (see Table 3).
Among the studied compounds, the most active ones—3a,b,d,fi and 4a,d,f,i—were selected for further evaluation using the thiosemicarbazide (TSC) seizure model, which affects GABA exchange. At a dose of 100 mg/kg, these compounds increase the latency of thiosemicarbazide (TSC) seizures by 1.1 to 2.0 times compared with the control. Ethosuximide shows a similar effect, extending the latency of TSC convulsions. In contrast, diazepam is ineffective in this model.
According to the antagonism data with pentylenetetrazol and the therapeutic indices of the compounds presented in Table 3, it is obvious that the most active compounds are 3h, 3i, and 4i. The ED50 of compound 4i is 23.8, and the therapeutic index is more than 33.6, which is the highest among these three active compounds.
According to the MES test, the studied compounds, as well as the reference drugs, did not show anticonvulsant effects. They were ineffective in protecting against tonic and clonic seizures induced by MES.
The structure–activity relationship study on anticonvulsant activity revealed that the presence of the diphenylmethyl group in the piperazine ring is beneficial for anticonvulsant activity for both series of compounds: pyrazolo[3,4-c]-2,7-naphthyridines 3d,i and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4d,i. Moreover, compounds containing the benzyl group at the seventh position of the 2,7-naphthyridine ring, 3i and 4i, were more active than compounds with an isopropyl group at the same position, 3d and 4d (Figure 2). It can also be argued that the cyclization of the pyrimidine ring in these cases did not essentially affect the activity of the compounds.
The introduction of the methyl group in the piperazine ring (compounds 3a,f and 4a,f) slightly decreased the activity. The replacement of the methyl group with ethyl and phenyl in pyrazolo[3,4-c]-2,7-naphthyridines in general led to compounds 3b,c,g,h with further decreased activity.
Pyrazolo[3,4-c]-2,7-naphthyridines 3e,j and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4e,j with the COOEt substituent in the piperazine ring were the least active compounds, and in these cases, the cyclization process also did not affect the activity of the compounds (Figure 2).

2.2.2. Evaluation of Psychotropic Effects

The 11 most potent compounds, i.e., 3a,b,d,fi and 4a,d,f,i, were assessed for their psychotropic properties at a dose of 50 mg/kg in the Open Field [44,45], Elevated Plus Maze (EPM) [46,47], and Forced Swimming [48] tests. This dose was selected because the ED50 of these compounds is within the 50 mg/kg range according to the confidence intervals. Research on motor behavior in rats was conducted by using a modified Open Field model. In this behavioral model, the rat control group showed an average of 18.8 horizontal movements and 4.2 vertical movements and examined 0.5 cells (see Table 4 and Figure 3). The compounds under study induced changes in behavioral indices compared with the control group, resulting in noticeable alterations in both horizontal and vertical movements of the animals after the compound’s administration. Compounds 3h, 3i, 4a, and 4d caused a statistically significant increase in the horizontal movements of the animals, indicating an activating effect, while the other compounds decreased horizontal movement.
Regarding vertical movements, compound 3i significantly increased them, indicating an activation effect on behavior. Compounds that reduce the horizontal and vertical movements of animals exhibit a sedative effect. However, all the selected compounds, especially 3f, 3i, 4a, and 4i, significantly increased the number of cell examinations compared with the control, which may indicate anti-anxiety effects (see Table 4 and Figure 3).
The most active of these was compound 3i, which increased both horizontal and vertical displacements, as well as the number of cell examinations. Ethosuximide, at an effective dose of 200 mg/kg, had no impact on any of the research activity indicators. In contrast, diazepam (2 mg/kg) significantly increased the number of cells examined compared with the control group, demonstrating a pronounced anti-anxiety effect. Similar to the studied compounds 3h, 3i, 4a, and 4d, diazepam also increased horizontal movements, exhibiting an activating effect on behavior. Compound 4i, a product of the cyclization of 3i, did not alter the horizontal and vertical displacements but led to the suppression of search activities compared with 3i.
In the Elevated Plus Maze (EPM) model, control animals predominantly remained in the closed arms—for a total of 278 s (see Table 5, Figure 4). Some of investigated compounds (3b, 3i, and 4i), along with ethosuximide and diazepam, significantly increased the time spent by the experimental animals in the center of the maze. Furthermore, the tested compounds significantly reduced the time spent in the closed arms and the number of entries into the closed arms. Following administration of these compounds (4i, 3f, and 4a) and diazepam, the experimental animals spent 24, 108, and 162 s, respectively, in the open arms, in contrast to the control animals and those receiving ethosuximide at a dose of 200 mg/kg (see Table 5, Figure 4), suggesting an anxiolytic effect for these compounds. Compounds 3f and 4a showed a more pronounced (up to two–three times) anxiolytic effect compared with diazepam.
One of the most widely utilized tests is the Forced Swimming test (FST), sometimes referred to as Porsolt’s test. Based on the idea that immobility is a gauge of behavioral despair, the FST is used to track depressive-like behavior.
The first immobilization in control mice in the Forced Swimming model (Table 6 and Figure 5) happened at 92 s. At a dose of 50 mg/kg, several of the investigated derivatives (3a, 3b, 3d, 3f, 3g, 3h, 4d, and 4i) statistically significantly extended the latent period of the first immobility and shortened its duration. For many compounds, the overall immobilization duration reduced; compound 3f had the lowest value, 12.5 s. These compounds and diazepam increased the total time of active swimming, suggesting that they exert an antidepressant effect in the same manner as diazepam. Particularly noteworthy are compounds 3b, 3f, 3h, 4d, and 4f. The results obtained when using 200 mg/kg ethosuximide are consistent with the control findings.
According to structure–activity relationship study, the presence of a benzyl substituent at seventh position of 6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c][3,8]naphthyridin-1-amine (3f), as well as 4-methylpiperazine, is beneficial for the antidepressant activity in the Forced Swimming model. Pyrazolo[3,4-c]-2,7-naphthyridines 3 showed higher activity in this test than pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4.

2.3. Molecular Docking

2.3.1. Docking to GABAA Receptor—Prediction of Mechanism of Anticonvulsant and Anxiolytic Activity

Antiepileptic drugs often target GABAA receptors by blocking sodium channels or enhancing γ-aminobutyric acid (GABA) activity [49,50]. To gain deeper insights into the molecular mechanisms underlying GABAA receptor inhibition and explore interactions within its active site, docking studies were performed on all tested compounds.
The GABAA receptor’s crystal structure was obtained from the Protein Data Bank (PDB) under ID 4COF for docking experiments [51]. The receptor’s X-ray diffraction structure had a resolution of 2.97 Å, with R and R-free values of 0.206 and 0.226, respectively. As part of the docking study validation, the original co-crystal ligand, benzamidine, was removed and re-docked to the catalytic site by using the same preparation parameters applied to the tested compounds. The root-mean-square deviation (RMSD) between the co-crystal and re-docked pose was determined to be 0.34.
The results are summarized in Table 7. It was found that compound 4i formed two hydrogen bonds with the residues Thr176 (N···H, 3.78 Å) and Arg180 (N···H, 3.26 Å), whereas diazepam only formed one hydrogen bond with Thr202 (N···H, 2.67), according to Figure 6. The complex ligand–enzyme was further stabilized by interacting hydrophobically with the residues Ala45, Leu99, Val198, Phe200, Ala201, and Thr202.

2.3.2. Docking to SERT Transporter and 5-HT1A Receptor

The two primary kinds of antidepressant drugs are selective serotonin reuptake inhibitors (SSRIs) and tricyclic antidepressants [52]. These medications work by blocking the serotonin (5-HT) transporter (SERT), which stops serotonin from entering pre-synaptic neurons again. To stop serotonergic neurotransmission, serotonin must be removed from the synaptic cleft by SERT, a transmembrane protein found in the pre-synaptic neuron membrane. Increased serotonin levels activate 5-HT1A receptors, leading to reduced serotonergic neurotransmission and delaying the onset of antidepressant effects [53,54]. This delay persists until the 5-HT1A receptors become desensitized, allowing serotonin release to return to normal.
Considering these factors, docking studies were conducted on both the SERT transporter and the 5-HT1A receptor to evaluate whether the tested compounds function as dual inhibitors of SERT and antagonists of pre-synaptic auto-inhibitory 5-HT1A receptors.
Since no crystal structure of the human SERT transporter is available in the Protein Data Bank (PDB), the X-ray crystal structure of LeuT bound to L-Tryptophan (PDB ID: 3F3A) [55], a prokaryotic homolog of SERT, was used for the docking studies. The results of these studies are presented in Table 8. As a validation step, the co-crystal ligand L-Tryptophan was removed and re-docked to the protein’s binding site by using the same parameters as those applied to the tested compounds (RMSD = 0.86).
Among the tested compounds, compound 4i emerged as one of the most promising. It formed a hydrogen bond with Gly439 and hydrophobic interactions with Ile441, and there was an aromatic interaction between its benzene moiety and Arg11 in the SERT transporter (Figure 7). These interactions suggest good binding affinity, potentially contributing to its antagonistic activity at the transporter’s site.
The crystal structure of the human β2-adrenergic receptor bound to the antagonist alprenolol (PDB ID: 3NYA) was utilized for the docking studies on the 5-HT1A receptor [56,57]. To ensure the reliability of the docking parameters, alprenolol, the original co-crystallized ligand, was re-docked to the protein’s catalytic site, yielding a root-mean-square deviation (RMSD) of 0.98 between the experimental and re-docked conformations.
All tested compounds (Table 9) were docked to the orthosteric binding site of the 5-HT1A receptor, with compound 4i achieving the best docking score (−9.10 kcal/mol). This was attributed to the formation of two hydrogen bonds with the Tyr316 residue. Additionally, the compound interacted hydrophobically with several residues, including Trp109, Trp313, Ile309, Thr195, Phe193, Val114, The290, Tyr308, Val117, Tyr199, and Ala200 (Figure 8), similar to alprenolol (Figure 8A).
Finally, docking studies suggest that compound 4i could serve as a dual-target agent, as it appears to effectively inhibit the SERT transporter while also strongly binding to the 5-HT1A receptor.

3. Materials and Methods

3.1. Chemistry: Experimental Part

General information: All chemicals and solvents were of commercially high purity grade and purchased from Sigma Aldrich (Saint Louis, MO, USA). The 1H and 13C NMR spectra for compounds 2ad, fj, 3aj, and 4af, hj were recorded in DMSO-d6/CCl4 (1/3) solution (300 MHz for 1H and 75 MHz for 13C) on a Mercury 300VX spectrometer (Varian Inc., Palo Alto, CA, USA). The 1H and 13C NMR spectra for compounds 6ad and 4g were recorded on a BRUKER AVANCE NEO spectrometer (Bruker BioSpin GmbH, Rheinstetten, Germany) with operating frequencies of 400 and 100 MHz, respectively, in DMSO-d6/CCl4(1/3) and CDCl3 at 303 K. Chemical shifts were expressed as δ (parts per million) in relation to TMS as internal standard. The IR spectra were recorded on a Nicolet Avatar 330-FT-IR spectrophotometer (Thermo Nicolet, Foster, CA, USA) in vaseline, with νmax in cm−1. The MS spectra were recorded on a Waters XEVO G3 Q-Tof spectrometer (Waters Corporation Company, Milford, MA, USA). Elemental analyses were performed on an Elemental Analyzer Euro EA 3000 (EuroVector, Pavia, Italy). Melting points were determined on a MP450 melting point apparatus. Compounds 1a,b [32] and 5ad [33] were already described. Physicochemical data for compound 2e are not given; it did not crystallize and was isolated as an oil (yield of 73%).

3.1.1. General Procedure for Synthesis of Compounds 2ad,fj

A mixture of 1,3-dichloro-2,7-naphthyridine 1 (10 mmol), appropriate amine (11 mmol), and triethylamine (1.53 mL, 11 mmol) in absolute ethanol (60 mL) was heated under reflux for 5 h followed by the addition of water (50 mL) after completion of the reaction. The precipitate was filtered off, washed with water, dried, and recrystallized from ethanol.
7-Isopropyl-3-chloro-1-(4-methylpiperazine-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2a). Colorless solid, yield 76%, m.p. 139–140 °C. IR ν/cm−1: 2221 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.09 (d, J = 6.6 Hz, 6H, CH(CH3)2), 2.27 (s, 3H, NCH3), 2.43–2.48 (m, 4H, CH3N(CH2)2), 2.76 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.88 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 2.91 (t, J = 6.0 Hz, 2H, NCH2CH2), 3.31–3.36 (m, 4H, N(CH2)2), 3.38 (s, 2H, NCH2). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 18.02, 29.03, 44.13, 45.38, 48.18, 48.51, 53.14, 54.17, 100.43, 113.95, 119.85, 147.79, 150.69, 159.35. Anal. calcd. for C17H24ClN5: C 61.16; H 7.25; N 20.98%. Found: C 60.81; H 7.41; N 21.19%.
7-Isopropyl-3-chloro-1-(4-ethylpiperazine-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2b). Cream solid, yield 72%, m.p. 123–124 °C. IR ν/cm−1: 2217 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.08 (t, J = 7.2 Hz, 3H, NCH2CH3), 1.09 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.41 (q, J = 7.2 Hz, 2H, NCH2CH3), 2.47–2.53 (m, 4H, C2H5N(CH2)2), 2.76 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.89 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 2.90 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.32–3.37 (m, 4H, N(CH2)2), 3.38 (s, 2H, NCH2). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 11.49, 18.01, 29.03, 44.09, 48.29, 48.56, 51.43, 51.96, 53.14, 100.36, 113.96, 119.76, 147.81, 150.64, 159.31. Anal. calcd. for C18H26ClN5: C 62.14; H 7.53; N 20.13%. Found: C 62.44; H 7.36; N 20.36%.
7-Isopropyl-3-chloro-1-(4-phenylpiperazine-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2c). Cream solid, yield 78%, m.p. 198–199 °C. IR ν/cm−1: 2221 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.10 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.79 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.87 (sep, J = 6.4 Hz, 1H, CH(CH3)2), 2.93 (t, J = 6.1 Hz, 2H, NCH2CH2), 3.26–3.32 (m, 4H, PhN(CH2)2), 3.46 (s, 2H, NCH2), 3.48–3.55 (m, 4H, N(CH2)2), 6.79 (t,t, J = 7.3, 1.2 Hz, 1H, Ph), 6.88–6.94 (m, 2H, Ph), 7.16–7.24 (m, 2H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 18.02, 29.07, 44.07, 48.32, 48.36, 48.41, 53.15, 100.80, 113.90, 115.51, 119.17, 120.17, 128.37, 147.82, 150.36, 150.87, 159.33. Anal. calcd. for C22H26ClN5: C 66.74; H 6.62; N 17.69%. Found: C 67.08; H 6.79; N 17.47%.
7-Isopropyl-3-chloro-1-[4-(diphenylmethyl)piperazine-1-yl]-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2d). Cream solid, yield 75%, m.p. 184–185 °C. IR ν/cm−1: 2221 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.06 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.47–2.53 (m, 4H, Ph2N(CH2)2), 2.73 (t, J = 5.7 Hz, 2H, NCH2CH2), 2.87 (sep, J = 6.3 Hz, 1H, CH(CH3)2), 2.90 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.34 (s, 2H, NCH2), 3.36–3.42 (m, 4H, N(CH2)2), 4.28 (s, 1H, CH(Ph)2), 7.15 (t,t, J = 7.3, 1.2 Hz, 2H, Ph), 7.22–7.29 (m, 4H, Ph), 7.39–7.44 (m, 4H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.89, 29.06, 43.97, 48.52, 51.18, 53.15, 75.26, 100.41, 113.96, 119.84, 126.44, 127.17, 127.97, 141.93, 147.78, 150.64, 159.25. Anal. calcd. for C29H32ClN5: C 71.66; H 6.64; N 14.41%. Found: C 71.97; H 6.79; N 14.61%.
7-Benzyl-3-chloro-1-(4-methylpiperazin-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2f). Cream solid, yield 70%, m.p. 138–140 °C. IR ν/cm−1: 2215 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.23 (s, 3H, NCH3), 2.34–2.41 (m, 4H, CH3N(CH2)2), 2.74 (t, J = 6.0 Hz, 2H, NCH2CH2), 2.93 (t, J = 6.0 Hz, 2H, NCH2CH2), 3.27–3.33 (m, 4H, N(CH2)2), 3.34 (s, 2H, NCH2), 3.67 (s, 2H, NCH2Ph), 7.19–7.33 (m, 5H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 28.35, 45.32, 48.06, 48.02, 52.59, 54.05, 61.26, 100.23, 113.92, 118.88, 126.66, 127.68, 128.27, 137.10, 147.98, 150.28, 159.18. Anal. calcd. for C21H24ClN5: C 66.04; H 6.33; N 18.34%. Found: C 65.71; H 6.51; N 18.12%.
7-Benzyl-3-chloro-1-(4-ethylpiperazin-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2g). Colorless solid, yield 83%, m.p. 123–125 °C. IR ν/cm−1: 2216 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.06 (t, J = 7.1 Hz, 3H, NCH2CH3), 2.32–2.46 (m, 6H, NCH2CH3, CH3N(CH2)2), 2.74 (t, J = 6.0 Hz, 2H, NCH2CH2), 2.93 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.27–3.35 (m, 4H, N(CH2)2), 3.34 (s, 2H, NCH2), 3.67 (s, 2H, NCH2Ph), 7.19–7.32 (m, 5H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 11.41, 28.36, 48.07, 48.13, 51.37, 51.81, 52.64, 61.27, 100.12, 113.97, 118.80, 126.67, 127.68, 128.29, 137.11, 148.00, 150.24, 159.13. Anal. calcd. for C22H26ClN5: C 66.74; H 6.62; N 17.69%. Found: C 67.09; H 6.78; N 17.92%.
7-Benzyl-3-chloro-1-(4-phenylpiperazin-1-yl)-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2h). Cream solid, yield 79%, m.p. 160–162 °C. IR ν/cm−1: 2219 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.76 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.95 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.17–3.24 (m, 4H, PhN(CH2)2), 3.43 (s, 2H, NCH2), 3.45–3.51 (m, 4H, N(CH2)2), 3.70 (s, 2H, NCH2Ph), 6.79 (t,t, J = 7.3, 1.0 Hz, 1H, Ph), 6.86–6.91 (m, 2H, Ph), 7.16–7.33 (m, 7H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 28.38, 47.97, 48.16, 48.26, 52.50, 61.23, 100.56, 113.90, 115.49, 119.15, 126.71, 127.72, 128.31, 128.38, 137.11, 148.00, 150.33, 150.45, 159.14. Anal. calcd. for C26H26ClN5: C 70.34; H 5.90; N 15.77%. Found: C 69.96; H 6.04; N 15.97%.
7-Benzyl-3-chloro-1-[4-(diphenylmethyl)piperazin-1-yl]-5,6,7,8-tetrahydro-2,7-naphthyridine-4-carbonitrile (2i). Colorless solid, yield 74%, m.p. 170–172 °C. IR ν/cm−1: 2221 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 3.17–3.24 (m, 4H, Ph2N(CH2)2), 2.70 (t, J = 5.7 Hz, 2H, NCH2CH2), 2.91 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.30 (s, 2H, NCH2), 3.32–3.38 (m, 4H, N(CH2)2), 3.62 (s, 2H, NCH2Ph), 4.23 (s, 1H, CH(Ph)2), 7.16 (t,t, J = 7.3, 1.1 Hz, 2H, Ph), 7.21–7.30 (m, 8H, Ph), 7.37–7.43 (m, 5H, Ph). Anal. calcd. for C33H32ClN5: C 74.21; H 6.04; N 13.11%. Found: C 74.55; H 6.21; N 13.32%.
Ethyl 4-(7-benzyl-3-chloro-4-cyano-5,6,7,8-tetrahydro-2,7-naphthyridin-1-yl)-piperazine-1-carboxylate (2j). Cream solid, yield 81%, m.p. 132–134 °C. IR ν/cm−1: 2221 (C≡N). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.26 (t, J = 7.1 Hz, 3H, CH2CH3), 2.76 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.95 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.26–3.31 (m, 4H, N(CH2)2), 3.38 (s, 2H, NCH2), 3.42–3.50 (m, 4H, N(CH2)2), 3.68 (s, 2H, NCH2Ph), 4.09 (q, J = 7.1 Hz, 2H, CH2CH3), 7.20–7.34 (m, 5H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 14.21, 28.39, 42.82, 48.02, 48.12, 52.27, 60.41, 61.22, 101.05, 113.78, 119.51, 126.71, 127.71, 128.30, 137.11, 147.93, 150.69, 153.96, 159.23. Anal. calcd. for C23H26ClN5O2: C 62.79; H 5.96; N 15.92%. Found: C 62.42; H 6.11; N 15.69%.

3.1.2. General Procedure for Synthesis of Compounds 3aj

A mixture of 1-amino-3-chloro-2,7-naphthyridine 1 (1 mmol) and hydrazine hydrate (501 mg, 10 mmol) in butanol (20 mL) was refluxed for 8 h. The butanol was distilled off to dryness, and water (50 mL) was added to the residue. The separated crystals were filtered off, washed with water, dried, and recrystallized from ethanol.
7-Isopropyl-5-(4-methylpiperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3a). Cream solid, yield 78%, m.p. 242–244 °C. IR ν/cm−1: 3050, 3178, 3213, 3440 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.11 (d, J = 6.4 Hz, 6H, CH(CH3)2), 2.28 (ս, 3H, NCH3), 2.46–2.53 (m, 4H, CH3N(CH2)2), 2.77 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.85 (sep, J = 6.4 Hz, 1H, CH(CH3)2), 3.05–3.11 (m, 4H, N(CH2)2), 3.16 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.49 (s, 2H, NCH2), 4.48 (s, 2H, NH2), 11.34 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 18.25, 26.84, 44.97, 45.55, 48.32, 49.43, 53.32, 54.70, 100.93, 114.51, 139.62, 147.15, 150.14, 159.59. Anal. calcd. for C17H27N7: C 61.98; H 8.26; N 29.76%. Found: C 61.66; H 8.44; N 30.01%. ESI HRMS [C17H27N7+H+] Calculated: 330.2406. Found: 330.2413.
5-(4-Ethylpiperazin-1-yl)-7-isopropyl-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3b). Cream solid, yield 76%, m.p. 229–231 °C. IR ν/cm−1: 3050, 3174, 3213, 3440 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.10 (t, J = 7.3 Hz, 3H, NCH2CH3), 1.11 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.42 (q, J = 7.2 Hz, 2H, NCH2CH3), 2.50–2.57 (m, 4H, C2H5N(CH2)2), 2.76 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.85 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 3.05–3.11 (m, 4H, N(CH2)2), 3.16 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.50 (s, 2H, NCH2), 4.48 (s, 2H, NH2), 11.37 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 11.65, 18.25, 26.84, 44.95, 48.36, 49.55, 51.63, 52.45, 53.32, 100.89, 114.51, 139.60, 147.17, 150.15, 159.60. Anal. calcd. for C18H29N7: C 62.94; H 8.51; N 28.55%. Found: C 63.29; H 8.70; N 28.33%. ESI HRMS [C18H29N7+H+] Calculated: 344.2563. Found: 344.2569.
7-Isopropyl-5-(4-phenylpiperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3c). Cream solid, yield 81%, m.p. 248–250 °C. IR ν/cm−1: 3023, 3090, 3165, 3210, 3438 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.12 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.79 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.87 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 3.19 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.23–3.34 (m, 8H, C4H8N2), 3.57 (s, 2H, NCH2), 4.50 (s, 2H, NH2), 6.76 (t,t, J = 7.3, 1.0 Hz, 1H, Ph), 6.90–6.95 (m, 2H, Ph), 7.15–7.23 (m, 2H, Ph), 11.38 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 18.23, 26.84, 44.94, 48.24, 48.54, 49.69, 53.36, 101.14, 114.52, 115.28, 118.72, 128.30, 139.84, 147.19, 150.10, 150.74, 159.40. Anal. calcd. for C22H29N7: C 67.49; H 7.47; N 25.04%. Found: C 67.79; H 7.65; N 25.25%. ESI HRMS [C22H29N7 + H+] Calculated: 392.2563. Found: 392.2567.
5-[4-(Diphenylmethyl)piperazin-1-yl]-7-isopropyl-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3d). Light yellow solid, yield 88%, m.p. 236–238 °C. IR ν/cm−1: 3208, 3342, 3410, 3486 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.09 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.48–2.56 (m, 4H, CHN(CH2)2), 2.75 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.83 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 3.09–3.18 (m, 6H, NCH2CH2, N(CH2)2), 3.46 (s, 2H, NCH2), 4.28 (s, 1H, CH(Ph)2), 4.47 (s, 2H, NH2), 7.14 (t,t, J = 7.3, 1.2 Hz, 2H, Ph), 7.22–7.29 (m, 4H, Ph), 7.40–7.45 (m, 4H, Ph), 11.30 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 18.20, 26.82, 44.87, 48.42, 49.66, 51.67, 53.33, 75.70, 100.87, 114.45, 126.30, 127.22, 127.93, 139.56, 142.40, 147.15, 150.11, 159.46. Anal. calcd. for C29H35N7: C 72.32; H 7.32; N 20.36%. Found: C 72.66; H 7.49; N 20.59%. ESI HRMS [C29H35N7 + H+] Calculated: 482.3032. Found: 482.3034.
Ethyl 4-(1-amino-7-isopropyl-6,7,8,9-tetrahydro-3H-pyrazolo-[3,4-c]-2,7-naphthyridin-5-yl)piperazine-1-carboxylate (3e). Cream solid, yield 85%, m.p. 226–228 °C. IR ν/cm−1: 1703 (C=O), 3087, 3145, 3309, 3378 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.11 (d, J = 6.5 Hz, 6H, CH(CH3)2), 1.27 (t, J = 7.1 Hz, 3H, CH2CH3), 2.77 (t, J = 5.6 Hz, 2H, NCH2CH2), 2.86 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 3.03–3.12 (m, 4H, N(CH2)2), 3.17 (br t, J = 5.6 Hz, 2H, NCH2CH2), 3.53 (s, 2H, NCH2), 3.53–3.60 (m, 4H, N(CH2)2), 4.09 (q, J = 7.1 Hz, 2H, CH2CH3), 4.53 (s, 2H, NH2), 11.41 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 14.28, 18.21, 26.85, 43.34, 44.89, 48.16, 49.55, 53.36, 60.25, 101.29, 114.47, 140.06, 147.23, 150.01, 154.21, 159.25. Anal. calcd. for C19H29N7O2: C 58.89; H 7.54; N 25.30 %. Found: C 58.56; H 7.69; N 25.54%.
7-Benzyl-5-(4-methylpiperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3f). Cream solid, yield 83%, m.p. 244–246 °C. IR ν/cm−1: 3220, 3309, 3371 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.25 (s, 3H, NCH3), 2.38–2.45 (m, 4H, N(CH2)2), 2.72 (t, J = 6.0 Hz, 2H, NCH2CH2), 3.01–3.08 (m, 4H, N(CH2)2), 3.19 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.45 (s, 2H, NCH2), 3.66 (s, 2H, NCH2Ph), 4.50 (s, 2H, NH2), 7.18–7.35 (m, 5H, Ph), 11.39 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 26.22, 45.48, 48.93, 49.25, 52.93, 54.54, 61.92, 100.88, 113.79, 126.44, 127.61, 128.42, 137.95, 139.4, 147.28, 150.22, 159.50. Anal. calcd. for C21H27N7: C 66.82; H 7.21; N 25.97%. Found: C 67.17; H 7.37; N 26.22%. ESI HRMS [C21H27N7 + H+] Calculated: 378.2406. Found: 378.2406.
7-Benzyl-5-(4-ethylpiperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3g). Colorless solid, yield 86%, m.p. 221–223 °C. IR ν/cm−1: 3031, 3203, 3353, 3444 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.07 (t, J = 7.2 Hz, 3H, NCH2CH3), 2.38 (q, J = 7.2 Hz, 2H, NCH2CH3), 2.41–2.48 (m, 4H, N(CH2)2), 2.72 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.01–3.08 (m, 4H, N(CH2)2), 3.18 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.45 (s, 2H, NCH2), 3.66 (s, 2H, NCH2Ph), 4.50 (s, 2H, NH2), 7.17–7.34 (m, 5H, Ph), 11.39 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 11.59, 26.22, 48.96, 49.42, 51.62, 52.30, 53.00, 61.95, 100.82, 113.79, 126.42, 127.59, 128.41, 137.96, 139.36, 147.26, 150.23, 159.52. Anal. calcd. for C22H29N7: C 67.49; H 7.47; N 25.04%. Found: C 67.12; H 7.65; N 25.27%. ESI HRMS [C22H29N7 + H+] Calculated: 392.2563. Found: 392.2567.
7-Benzyl-5-(4-phenylpiperazin-1-yl)-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3h). Colorless solid, yield 82%, m.p. 227–229 °C. IR ν/cm−1: 3021, 3095, 3209, 3312, 3411 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.75 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.18–3.26 (m, 10H, C4H8N2, NCH2CH2), 3.53 (s, 2H, NCH2), 3.68 (s, 2H, NCH2Ph), 4.52 (s, 2H, NH2), 6.76 (t,t, J = 7.3, 1.0 Hz, 1H, Ph), 6.87–6.92 (m, 2H, Ph), 7.15–7.36 (m, 7H, Ph), 11.41 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 26.19, 48.42, 48.86, 49.56, 52.83, 61.86, 101.05, 113.76, 115.26, 118.71, 126.45, 127.60, 128.34, 128.38, 137.671, 139.58, 147.26, 150.15, 150.73, 159.30. Anal. calcd. for C26H29N7: C 71.04; H 6.65; N 22.31%. Found: C 70.71; H 6.80; N 22.10%. ESI HRMS [C26H29N7 + H+] Calculated: 440.2563. Found: 440.2566.
7-Benzyl-5-[4-(diphenylmethyl)piperazin-1-yl]-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-1-amine (3i). Cream solid, yield 87%, m.p. 217–219 °C. IR ν/cm−1: 3026, 3148, 3301, 3376 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.39–2.48 (m, 4H, N(CH2)2), 2.69 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.06–3.13 (m, 4H, N(CH2)2), 3.18 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.42 (s, 2H, NCH2), 3.62 (s, 2H, NCH2Ph), 4.25 (s, 1H, CH(Ph)2), 4.47 (s, 2H, NH2), 7.12–7.32 (m, 10H, Ph), 7.38–7.45 (m, 5H, Ph), 11.34 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 26.17, 48.87, 49.54, 51.50, 53.14, 61.91, 75.61, 100.80, 113.67, 126.29, 126.40, 127.29, 127.56, 127.89, 128.32, 137.92, 139.27, 142.23, 147.18, 150.18, 159.34. Anal. calcd. for C33H35N7: C 74.83; H 6.66; N 18.51%. Found: C 74.48; H 6.83; N 18.75%. ESI HRMS [C33H35N7 + H+] Calculated: 530.3032. Found: 530.3033.
Ethyl 4-(1-amino-7-benzyl-6,7,8,9-tetrahydro-3H-pyrazolo[3,4-c]-2,7-naphthyridin-5-yl)piperazine-1-carboxylate (3j). Cream solid, yield 79%, m.p. 220–222 °C. IR ν/cm−1: 1701 (C=O), 3091, 3147, 3314, 3383 (NH, NH2). 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.27 (t, J = 7.1 Hz, 3H, CH2CH3), 2.75 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.98–3.06 (m, 4H, N(CH2)2), 3.21 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.42–3.50 (m, 6H, NCH2, N(CH2)2), 3.67 (s, 2H, NCH2Ph), 4.08 (q, J = 7.1 Hz, 2H, CH2CH3), 4.54 (s, 2H, NH2), 7.19–7.35 (m, 5H, Ph), 11.42 (s, 1H, NH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 14.29, 26.17, 43.20, 48.96, 49.46, 52.62, 60.25, 61.87, 101.20, 113.66, 126.49, 127.62, 128.39, 1337.86, 19.74, 147.27, 150.05, 154.12, 159.13. Anal. calcd. for C23H29N7O2: C 63.43; H 6.71; N 22.51%. Found: C 63.07; H 6.90; N 22.73%.

3.1.3. General Procedure for Synthesis of Compounds 4aj

A mixture of pyrazolo[3,4-c]-2,7-naphthyridine 2 (1 mmol) and acetylacetone (15 mL) was refluxed for 8 h. Then, the excess of acetylacetone was distilled off, and diethyl ether (50 mL) was added. The formed crystals were filtered off and recrystallized from ethanol.
3-Isopropyl-9,11-dimethyl-5-(4-methylpiperazin-1-yl)-1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4a). Light yellow solid, yield 71%, m.p. 221–223 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.14 (d, J = 6.4 Hz, 6H, CH(CH3)2), 2.30 (s, 3H, NCH3), 2.52–2.58 (m, 4H, CH3N(CH2)2), 2.64 (s, 3H, CH3), 2.84 (s, 3H, CH3), 2.89 (t, J = 5.5 Hz, 2H, NCH2CH2), 2.88 (sep, J = 6.3 Hz, 1H, CH(CH3)2), 3.25–3.31 (m, 4H, N(CH2)2), 3.42 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.59 (s, 2H, NCH2), 7.00 (s, 1H, 10-CH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.01, 18.24, 23.89, 27.73, 44.74, 45.55, 48.73, 49.12, 53.37, 54.54, 99.69, 110.27, 117.10, 140.80, 142.23, 143.69, 154.61, 157.97, 162.38. Anal. calcd. for C22H31N7: C 67.15; H 7.94; N 24.91%. Found: C 67.49; H 8.12; N 25.13%. ESI HRMS [C22H31N7 + H+] Calculated: 394.2719. Found: 394.2721.
5-(4-Ethylpiperazin-1-yl)-3-isopropyl-9,11-dimethyl-1,2,3,4-tetrahydropyrimido-[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4b). Light yellow solid, yield 68%, m.p. 170–172 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.12 (t, J = 7.2 Hz, 3H, NCH2CH3), 1.14 (d, J = 6.4, 6H, CH(CH3)2), 2.44 (q, J = 7.2 Hz, 2H, NCH2CH3), 2.56–2.61 (m, 4H, C2H5N(CH2)2), 2.64 (s, 3H, CH3), 2.85 (s, 3H, CH3), 2.87 (t, J = 5.7 Hz, 2H, NCH2CH2), 2.88 (sep, J = 6.2 Hz, 1H, CH(CH3)2), 3.25–3.30 (m, 4H, N(CH2)2), 3.42 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.59 (s, 2H, NCH2), 6.99 (s, 1H, 10-CH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 11.63, 17.00, 18.23, 23.87, 27.73, 44.72, 48.77, 49.23, 51.62, 52.32, 53.36, 99.66, 110.24, 117.09, 140.75, 142.22, 143.67, 154.58, 157.98, 162.35. Anal. calcd. for C23H33N7: C 67.78; H 8.16; N 24.06%. Found: C 67.42; H 8.32; N 23.82%.
3-Isopropyl-9,11-dimethyl-5-(4-phenylpiperazin-1-yl)-1,2,3,4-tetrahydropyrimido-[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4c). Light yellow solid, yield 73%, m.p. 189–191 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.14 (d, J = 6.4 Hz, 6H, CH(CH3)2), 2.65 (s, 3H, CH3), 2.85 (s, 3H, CH3), 2.82–2.94 (m, 3H, NCH2CH2, CH(CH3)2), 3.33–3.49 (m, 10H, NCH2CH2, C4H8N2), 3.66 (s, 2H, NCH2), 6.78 (t,t, J = 7.3, 1.1 Hz, 1H, Ph), 6.91–6.99 (m, 2H, Ph), 7.03 (s, 1H, 10-CH), 7.15–7.24 (m, 2H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.00, 18.15, 23.89, 27.65, 44.65, 48.45, 49.36, 53.48, 99.82, 104.56, 110.41, 115.33, 118.76, 128.28, 140.95, 142.24, 143.77, 150.73, 154.73, 157.91, 162.21. Anal. calcd. for C27H33N7: C 71.18; H 7.30; N 21.52%. Found: C 71.56; H 7.49; N 21.27%.
5-[4-(Diphenylmethyl)piperazin-1-yl]-3-isopropyl-9,11-dimethyl-1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4d). Cream solid, yield 67%, m.p. 143–144 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.12 (d, J = 6.5 Hz, 6H, CH(CH3)2), 2.55–2.61 (m, 4H, N(CH2)2), 2.63 (s, 3H, CH3), 2.80–2.94 (m, 3H, NCH2CH2, CH(CH3)2), 2.84 (s, 3H, CH3), 3.30–3.36 (m, 4H, N(CH2)2), 3.41 (t, J = 5.5 Hz, 2H, NCH2CH2), 3.55 (s, 2H, NCH2), 4.30 (s, 1H, CH(Ph)2), 6.98 (s, 1H, 10-CH), 7.15 (t,t, J = 7.3, 1.2 Hz, 2H, Ph), 7.23–7.30 (m, 4H, Ph), 7.43–7.48 (m, 4H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.02, 18.18, 23.89, 27.75, 44.64, 48.84, 49.41, 51.52, 53.40, 75.68, 99.65, 110.26, 126.32, 127.23, 127.93, 140.75, 142.23, 142.35, 143.70, 154.60, 157.97, 162.22. Anal. calcd. for C34H39N7: C 74.83; H 7.20; N 17.97%. Found: C 74.48; H 7.37; N 18.17%.
Ethyl 4-(3-isopropyl-9,11-dimethyl-1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo-[3,4-c]-2,7-naphthyridin-5-yl)piperazine-1-carboxylate (4e). Cream solid, yield 69%, m.p. 249–251 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.29 (t, J = 7.1 Hz, 3H, CH2CH3), 1.51 (d, J = 6.3 Hz, 6H, CH(CH3)2), 2.67 (s, 3H, CH3), 2.83 (s, 3H, CH3), 3.17–3.49 (m, 5H, CH(CH3)2, N(CH2)2), 3.56–4.01 (m, 8H, NCH2CH2, N(CH2)2), 4.12 (q, J = 7.1 Hz, 2H, CH2CH3), 4.33 (s, 2H, NCH2), 7.15 (s, 1H, 10-CH). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 14.51, 46.48, 17.06, 24.16, 24.48, 43.17, 43.20, 43.26, 43.83, 46.16, 49.31, 56.79, 60.79, 110.83, 112.03, 139.55, 142.51, 145.23, 154.78, 157.30, 157.80, 161.96. Anal. calcd. for C24H33N7O2: C 63.84; H 7.37; N 21.71%. Found: C 64.17; H 7.22; 21.50%. ESI HRMS [C24H33N7O2 + H+] Calculated: 452.2774. Found: 452.2774.
3-Benzyl-9,11-dimethyl-5-(4-methylpiperazin-1-yl)-1,2,3,4-tetrahydropyrimido-[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4f). Yellow solid, yield 72%, m.p. 183–185 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.27 (s, 3H, NCH3), 2.43–2.50 (m, 4H, N(CH2)2), 2.62 (s, 3H, CH3), 2.85 (s, 3H, CH3), 2.82 (t, J = 6.0 Hz, 2H, NCH2CH2), 3.21–3.28 (m, 4H, N(CH2)2), 3.45 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.56 (s, 2H, NCH2), 3.71 (s, 2H, NCH2Ph), 7.02 (s, 1H, 10-CH), 7.19–7.36 (m, 5H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.00, 23.86, 27.09, 45.38, 48.66, 48.85, 53.26, 54.30, 61.87, 99.55, 110.36, 116.31, 126.41, 127.57, 128.35, 137.80, 140.55, 142.21, 143.76, 154.76, 157.95, 162.14. Anal. calcd. for C26H31N7: C 70.72; H 7.08; N 22.20%. Found: C 70.35; H 6.89; N 21.97%. ESI HRMS [C26H31N7 + H+] Calculated: 442.2719. Found: 442.2722.
3-Benzyl-5-(4-ethylpiperazin-1-yl)-9,11-dimethyl-1,2,3,4-tetrahydropyrimido-[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4g). Yellow solid, yield 67%, m.p. 205–207 °C. 1H NMR (400 MHz, CDCl3) δ 1.15 (t, J = 7.2 Hz, 3H, NCH2CH3), 2.49 (q, J = 7.2 Hz, 2H, NCH2CH3), 2.56–2.60 (m, 4H, N(CH2)2), 2.66 (s, 3H, CH3), 2.90 (s, 3H, CH3), 2.91 (t, J = 6.1 Hz, 2H, NCH2CH2), 3.38–3.43 (m, 4H, N(CH2)2), 3.55 (t, J = 6.2 Hz, 2H, NCH2CH2), 3.66 (s, 2H, NCH2), 3.77 (s, 2H, NCH2Ph), 7.27 (s, 1H, 10-CH), 7.28–7.42 (m, 5H, Ph). 13C NMR (100 MHz, CDCl3) δ 12.07, 18.01, 24.73, 27.68, 49.50, 49.77, 52.55, 53.06, 54.23, 62.74, 100.35, 110.81, 117.17, 127.29, 128.41, 129.32, 138.26, 141.62, 143.50, 144.81, 156.04, 159.30, 163.53. Anal. calcd. for C27H33N7: C 71.18; H 7.30; N 21.52%. Found: C 70.83; H 7.47; N 21.28%.
3-Benzyl-9,11-dimethyl-5-(4-phenylpiperazin-1-yl)-1,2,3,4-tetrahydropyrimido-[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4h). Brown solid, yield 70%, m.p. 193–195 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.63 (s, 3H, CH3), 2.85 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.87 (s, 3H, CH3), 3.26–3.31 (m, 4H, PhN(CH2)2), 3.39–3.45 (m, 4H, N(CH2)2), 3.48 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.64 (s, 2H, NCH2), 3.73 (s, 2H, NCH2Ph), 6.77 (t,t, J = 7.2, 1.0 Hz, 1H, Ph), 6.90–6.95 (m, 2H, Ph), 7.03 (s, 1H, 10-CH), 7.16–7.37 (m, 7H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.00, 23.86, 27.09, 48.35, 48.63, 49.22, 53.20, 61.89, 99.74, 110.43, 115.31, 116.35, 118.75, 126.45, 127.58, 128.30, 128.34, 137.79, 140.75, 142.24, 143.80, 150.71, 154.80, 157.94, 162.07. Anal. calcd. for C31H33N7: C 73.93; H 6.60; N 19.47%. Found: C 73.57; H 6.78; N 19.70%. ESI HRMS [C31H33N7 + H+] Calculated: 504.2876. Found: 504.2877.
3-Benzyl-5-[4-(diphenylmethyl)piperazin-1-yl]-9,11-dimethyl-1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridine (4i). Yellow solid, yield 68%, m.p. 288–290 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 2.46–2.53 (m, 4H, N(CH2)2), 2.61 (s, 3H, CH3), 2.79 (t, J = 5.6 Hz, 2H, NCH2CH2), 2.85 (s, 3H, CH3), 3.25–3.33 (m, 4H, N(CH2)2), 3.43 (t, J = 5.6 Hz, 2H, NCH2CH2), 3.51 (s, 2H, NCH2), 3.66 (s, 2H, NCH2Ph), 4.27 (s, 1H, CH(Ph)2), 6.99 (s, 1H, 10-CH), 7.12–7.34 (m, 11H, Ph), 7.40–7.46 (m, 4H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 17.01, 23.85, 27.10, 48.66, 49.28, 51.38, 53.50, 61.93, 75.59, 99.53, 110.26, 116.27, 126.32, 126.41, 127.27, 127.56, 127.89, 128.31, 137.82, 140.49, 142.20, 142.24, 143.75, 154.66, 158.02, 162.05. Anal. calcd. for C38H39N7: C 76.87; H 6.62; N 16.51%. Found: C 76.53; H 6.47; N 16.29%.
Ethyl 4-(3-benzyl-9,11-dimethyl-1,2,3,4-tetrahydropyrimido[1′,2′:1,5]pyrazolo-[3,4-c]-2,7-naphthyridin-5-yl)piperazine-1-carboxylate (4j). Colorless solid, yield 71%, m.p. 215–217 °C. 1H NMR (300 MHz, DMSO-d6/CCl4, 1/3) δ 1.28 (t, J = 7.1 Hz, 3H, CH2CH3), 2.63 (s, 3H, CH3), 2.86 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.85 (s, 3H, CH3), 3.20–3.26 (m, 4H, N(CH2)2), 3.47 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.50–3.56 (m, 4H, N(CH2)2), 3.57 (s, 2H, NCH2), 3.72 (s, 2H, NCH2Ph), 4.08 (q, J = 7.1 Hz, 2H, CH2CH3), 7.03 (s, 1H, 10-CH), 7.19–7.37 (m, 5H, Ph). 13C NMR (75 MHz, DMSO-d6/CCl4, 1/3) δ 14.26, 16.99, 23.86, 27.04, 43.07, 48.70, 49.13, 53.00, 60.22, 61.90, 99.85, 110.51, 116.22, 126.47, 127.59, 128.35, 137.77, 140.95, 142.23, 143.86, 154.11, 154.89, 157.81, 161.96. Anal. calcd. for C28H33N7O2: C 67.31; H 6.66; N 19.62%. Found: C 66.93; H 6.47; N 19.38%. ESI HRMS [C28H33N7O2 + H+] Calculated: 500.2774. Found: 500.2776.

3.1.4. General Procedure for Synthesis of Compounds 6ad

To a stirred solution of sodium ethoxide (408 mg, 6 mmol) and 50 mL of hydroxylamine hydrochloride (347.4 mg, 5 mmol) in absolute ethanol, 1-amino-3-chloro-2,7-naphthyridine 5 (1 mmol) was added, and the reaction mixture was refluxed for 15 h, followed by the addition of water (50 mL) after completion of the reaction. The precipitate was filtered off, washed with water, dried, and recrystallized from ethanol.
7-Isopropyl-5-pyrrolidin-1-yl-6,7,8,9-tetrahydroisoxazolo[5,4-c]-2,7-naphthyridin-1-amine (6a). Cream solid, yield 63%, m.p. 202–204 °C. IR ν/cm−1: 3458, 3321, 3211 (NH2). 1H NMR (400 MHz, DMSO-d6/CCl4, 1/3) δ 1.09 (d, J = 6.5, 6H, CH(CH3)2), 1.92–1.98 (m, 4H, C4H8N), 2.71 (t, J = 5.8 Hz, 2H, NCH2CH2), 2.87 (sep, J = 6.5 Hz, 1H, CH(CH3)2), 3.08 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.51–3.58 (m, 4H, N(CH2)2), 3.53 (s, 2H, NCH2), 5.35 (s, 2H, NH2). 13C NMR (100 MHz, DMSO-d6/CCl4, 1/3) δ 18.15, 25.06, 26.75, 44.23, 49.40, 49.68, 53.45, 96.95, 113.48, 141.37, 158.28, 158.60, 167.09. Anal. calcd. for C16H23N5O: C 63.76; H 7.69; N 23.24%. Found: C 63.4; H 7.55; N 23.04%. ESI HRMS [C16H23N5O + H+] Calculated: 302.1981. Found: 302.1997.
7-Isopropyl-5-piperidin-1-yl-6,7,8,9-tetrahydroisoxazolo[5,4-c]-2,7-naphthyridin-1-amine (6b). Colorless solid, yield 67%, m.p. 248–250 °C. IR ν/cm−1: 3443, 3311, 3205 (NH2). 1H NMR (400 MHz, DMSO-d6/CCl4, 1/3) δ 1.07 (d, J = 6.6, 6H, CH(CH3)2), 1.59–1.75 (m, 6H, C5H10N), 2.76 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.84 (sep, J = 6.6 Hz, 1H, CH(CH3)2), 3.07–3.18 (m, 6H, NCH2CH2, N(CH2)2), 3.46 (s, 2H, NCH2), 5.50 (s, 2H, NH2). 13C NMR (100 MHz, DMSO-d6/CCl4, 1/3) δ 18.20, 24.02, 25.50, 26.54, 44.73, 48.48, 50.47, 53.30, 99.84, 117.48, 142.05, 158.29, 161.27, 166.98. Anal. calcd. for C17H25N5O: C 64.73; H 7.99; N 22.20%. Found: C 64.37; H 8.16; N 22.43%. ESI HRMS [C17H25N5O + H+] Calculated: 316.2137. Found: 316.2143.
7-Isopropyl-5-morpholin-4-yl-6,7,8,9-tetrahydroisoxazolo[5,4-c]-2,7-naphthyridin-1-amine (6c). Colorless solid, yield 62%, m.p. 256–258 °C. IR ν/cm−1: 3448, 3331, 3221 (NH2). 1H NMR (400 MHz, DMSO-d6/CCl4, 1/3) δ 1.08 (d, J = 6.7, 6H, CH(CH3)2), 2.76 (t, J = 5.9 Hz, 2H, NCH2CH2), 2.87 (sep, J = 6.6 Hz, 1H, CH(CH3)2), 3.09–3.19 (m, 6H, NCH2CH2, N(CH2)2), 3.48 (s, 2H, NCH2), 3.73–3.79 (m, 4H, O(CH2)2), 5.54 (s, 2H, NH2). 13C NMR (100 MHz, DMSO-d6/CCl4, 1/3) δ 18.13, 26.55, 44.44, 48.51, 49.76, 53.29, 65.93, 100.45, 117.41, 142.61, 158.30, 160.11, 166.82. Anal. calcd. for C16H23N5O2: C 60.55; H 7.30; N 22.07%. Found: C 60.92; H 7.48; N 22.32%.
7-Isobutyl-5-pyrrolidin-1-yl-6,7,8,9-tetrahydroisoxazolo[5,4-c]-2,7-naphthyridin-1-amine (6d). Colorless solid, yield 65%, m.p. 204–206 °C. IR ν/cm−1: 3468, 3293, 3188 (NH2). 1H NMR (400 MHz, DMSO-d6/CCl4, 1/3) δ 0.91 (d, J = 6.5 Hz, 6H, CH(CH3)2), 1.79–1.91 (m, 1H, CH(CH3)2), 1.89–1.99 (m, 4H, C4H8N), 2.24 (d, J = 7.4 Hz, 2H, CHCH2), 2.67 (t, J = 5.9 Hz, 2H, NCH2CH2), 3.11 (t, J = 5.8 Hz, 2H, NCH2CH2), 3.45 (s, 2H, NCH2), 3.48–3.54 (m, 4H, N(CH2)2), 5.37 (s, 2H, NH2). 13C NMR (100 MHz, DMSO-d6/CCl4, 1/3) δ 20.48, 25.04, 25.19, 26.17, 49.04, 49.66, 54.45, 66.02, 96.94, 112.85, 141.15, 158.28, 158.54, 167.14. Anal. calcd. for C17H25N5O: C 64.73; H 7.99; N 22.20%. Found: C 65.08; H 7.83; N 22.41%. ESI HRMS [C17H25N5O + H+] Calculated: 316.2137. Found: 316.2141.

3.2. Biological Evaluation: Experimental Part

Compounds’ possible neurotropic effects (anticonvulsant, sedative, anti-anxiety, and antidepressive) and adverse effects were examined in 50 male Wistar rats (weighing 120–140 g) and 450 white mice of both sexes (weighing 18–24 g). Every animal group was kept in the same room at 25 ± 2 °C and fed the same food. Reference substances were the sedative diazepam and the well-known antiepileptic medication ethosuximide [41,42]. The Litchfield and Wilcoxon statistical approach was applied to ascertain ED50, neurotoxic TD50, and LD50 [58]. The number of fatalities following 24 h exposure to dosages ranging from 100 to 1020 mg/kg was used to determine acute toxicity (LD50). Every biological experiment was carried out in strict adherence to the European Convention for the Protection of Vertebrate Animals. All animal procedures were performed in accordance with the Guidelines for the Care and Use of Laboratory Animals (ETS No123, Strasbourg, 18 March 1986).

3.2.1. Evaluation of Anticonvulsant Potency

The following tests were used to examine the anticonvulsant impact of the newly synthesized compounds: pentylenetetrazole (PTZ)-induced convulsions, thiosemicarbazide-induced convulsions, and maximum electroshock (MES) [36,37,38,39,40]. For the investigation, outbred mice weighing 18–22 g were employed.

3.2.2. PTZ-Induced Convulsions

PTZ was injected subcutaneously at a dose of 90 mg/kg, inducing convulsions in 95% of the animals (CD95%). Test substances were administered intraperitoneally (i.p.) at doses ranging from 10 to 200 mg/kg in a suspension of carboxymethylcellulose with Tween-80, 45 min before PTZ injection. Control animals received an emulsifier. Each dose of the test compounds was tested in six animals. Each animal was placed in an individual plastic cage for 1 h of observation. Seizures and clonic convulsions were recorded.

3.2.3. Thiosemicarbazide-Induced Convulsions

Thiosemicarbazide, an antimetabolite that inhibits GABA synthesis by targeting glutamic acid decarboxylase in the brain, was administered subcutaneously to mice at a dose of 18 mg/kg as a 0.5% solution, inducing clonic convulsions. The test compounds were administered intraperitoneally at a dose of 100 mg/kg in a suspension of carboxymethylcellulose with Tween-80, 45 min before thiosemicarbazide administration. The comparative drugs were administered as follows: ethosuximide at a dose of 200 mg/kg and diazepam at a dose of 2 mg/kg. The anticonvulsant activity of the test compounds was evaluated based on the latency time to the onset of seizures.

3.2.4. MES Test

The following parameters were employed in the MES test, which is an animal model for generalized tonic seizures in epilepsy: 50 mA, 0.2 s, and an oscillation frequency of 50 impulses per second. By preventing the tonic-extensor phase of convulsions, the investigated drugs’ anticonvulsant qualities were evaluated.

3.2.5. Examination of Psychotropic Effects of Synthesized Compounds

The psychotropic properties of the selected compounds were evaluated by using the following tests: the Open Field test [44,45], the Elevated Plus Maze (EPM) [46,47], the Forced Swimming test [48], and Rotating Rod Test to study muscle relaxation [43].

3.2.6. Open Field Test

Research on motor behavior in rats was conducted by using a modified Open Field model. The setup featured an instrument with the floor divided into squares, each with perforated cells. Experiments were carried out during the daytime under natural light conditions. Each test group included 8 rats per compound, as well as control and reference drugs (diazepam and ethosuximide). The compounds were administered intraperitoneally at an effective dose of 50 mg/kg in a suspension of carboxymethylcellulose and Tween-80. Within 5 min of administration, indicators of both sedative and activating behavior were recorded, including the number of horizontal movements, instances of standing on the hind legs (vertical movements), and the sniffing of the cells.

3.2.7. EPM Test

The Elevated Plus Maze test was used to evaluate the anti-anxiety and sedative effects of the tested compounds in mice. The maze consists of a cruciform apparatus elevated above the floor, with a pair of open arms and a pair of closed arms positioned opposite each other. The test compounds and the reference drug were administered intraperitoneally at doses of 50 mg/kg and 2 mg/kg, respectively, before the experiments. Control animals were given an emulsifier. The anxiolytic effect of the compounds was assessed by measuring the increase in the number of entries into the open (light) arms and the time spent in them, while ensuring that total motor activity did not increase. The sedative effect was evaluated based on the time spent in the closed (dark) arms and the number of attempts to enter the center of the maze.

3.2.8. Forced Swimming Test

The Forced Swimming test was used to evaluate the “despair” and “depression” effects of the tested compounds. The test compounds and the reference drug were administered intraperitoneally at doses of 50 mg/kg and 2 mg/kg, respectively, prior to the experiments. Following injection, the experimental animals were placed in a glass container (22 cm in height and 14 cm in diameter) filled to a depth of one-third with water. The latency to immobility, the total duration of active swimming, and the time spent immobile were recorded during the 6 min period in which the animals were in the container. The experiments were conducted under natural light conditions.

3.2.9. Evaluation of Coordination of Movement (Muscle Relaxant)

To evaluate the coordination of movement (muscle relaxant) in experimental animals, the Rotating Rod Test in mice was used. To this end, mice were placed on a metal rod with a corrugated rubber coating, which rotated at 5 revolutions per minute. The number of experimental mice (administered with the newly synthesized compounds at a dose of 50 mg/kg to 500 mg/kg) that were unable to stay on the rod for 2 min was recorded. The test determines the neurotoxic effects of compounds.

3.3. Docking Studies

For docking studies, AutoDock 4 (version 4.2.6) was used. The structures of the GABAA receptor (PDB ID: 4COF), the SERT transporter (PDB ID: 3F3A), and the 5-HT1A receptor (PDB ID: 3NYA) were obtained from the Protein Data Bank. The docking protocol followed was consistent with previously published studies [51,52,53,59].
All molecules were sketched in the chemdraw12.0 program. The geometry of the built compounds was optimized by using molecular mechanical force fields 94 (MMFF94) energy via the program LigandScout (ver. 4.4.5), and partial charges were also calculated; the conformers of each ligand were generated, and the one with the best conformation was maintained and saved as mol2 files, which were passed to ADT for file preparation. There, polar hydrogen was added to each structure, followed by computing Gasteiger and Kollman charges and the torsions. The region of interest, used by Autodock4 for docking runs and by Autogrid4 for affinity grid map preparation, was defined in such a way to comprise the whole catalytic binding site by using a grid size of 110 × 110 × 110 xyz points with a grid spacing of 0.375 Å. The grid centers were calculated to be at x = −20.558, y = −19.574, and z = 127.994 for the GABAA receptor; at x = −19.7478, y = 22.417, and z = −14.3006 for the SERT transporter; and at x = −8.207, y = 9.305, and z = −48.61 for the 5-HT1A receptor. For the simulation, default values of quaternation, translation, and torsion steps were applied. The Lamarckian Genetic Algorithm with default parameters was applied for minimization. The number of docking runs was 100. After docking, the 100 solutions were clustered into groups with RMS lower than 1.0 Ε. The clusters were ranked by the lowest energy representative of each cluster. Upon the completion of docking, the best poses were screened by examination of binding energy (ΔGbinding, kcal/mol) and number in cluster. In order to describe the ligand–binding pocket interactions, the top-ranked binding mode found by AutoDock in complex with the binding pocket of the enzyme was selected. Accelrys Discovery Studio 2020 Client [60,61] and LigandScout (ver. 4.4.5) were used for the graphical representations of all ligand–protein complexes.

4. Conclusions

Starting from 1,3-dichloro-2,7-naphthyridines, a series of piperazino-substituted pyrazolo[3,4-c]-2,7-naphthyridines and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthy ridines and new heterocyclic systems (isoxazolo[5,4-c]-2,7-naphthyridines) were synthesized. The investigation of their neurotropic activity showed that some of these compounds (3a,b,d,fi and 4a,d,f,i) display high anticonvulsant activity, especially in the test of antagonism with pentylenetetrazol, surpassing the well-known antiepileptic drug ethosuximide. Thus, the most active compounds in the pentylenpotetrazole test are 3h, 3i, and 4i, with the ED50 of compound 4i being 23.8 and the therapeutic index being more than 33.6, which is the highest among these three active compounds. On the other hand, they simultaneously exhibit psychotropic (anxiolytic, antidepressant, or sedative) or behavioral depressant effects.
The effective compounds do not cause myorelaxation at the tested doses and have high therapeutic indices. Their therapeutic indexes are significantly higher than that of the reference drug, ethosuximide. At a dose of 100 mg/kg, these compounds increased the latency of thiosemicarbazide seizures by 1.1 to 2.0 times compared with the control. Compounds 3f and 4a showed a more pronounced (up to two–three times) anxiolytic effect compared with diazepam. Compared with the controls, the compounds increased the active swimming time, indicating antidepressant activity.
The most active compounds contained methyl and diphenylmethyl groups in the piperazine ring. Finally, the docking studies revealed that the most potent anticonvulsant compounds (3i, 4i, and 4a) showed high affinity for the GABAA and 5-HT1A receptors, as well as the SERT transporter. Thus, compound 4i forms two hydrogen bonds with the residues Thr176 (N···H, 3.78 Å) and Arg180 (N···H, 3.26 Å), while diazepam only forms one hydrogen bond with Thr202 (N···H, 2.67) docked on the GABAA receptor with the highest free binding energy (−8.81kcal/mol), comparable to that of diazepam (−8.90 kcal/mol). At the same time, compound 4i docked to the SERT transporter appeared to be the most promising with a free binding energy of −7.28, the highest among all compounds. The complex ligand compound–enzyme was stabilized by hydrogen bond formation with Gly439 and a hydrophobic interaction with Ile441, and there was an aromatic interaction between the benzene moiety and Arg11 in the SERT transporter. Furthermore, compound 4i docked to the orthosteric binding site of the 5-HT1A receptor achieved the best docking score (−9.10 kcal/mol). This high docking score is due to two hydrogen bonds and plenty of hydrophobic interactions, which stabilized more the complex compound–enzyme. Thus, compound 4i can be considered a dual-acting agent targeting the SERT transporter and the 5-HT1A receptor.

Supplementary Materials

The following supporting information can be downloaded at: https://www.mdpi.com/article/10.3390/ph18040597/s1.

Author Contributions

Conceptualization, S.N.S., A.G. and R.G.P.; methodology, A.A.H., E.K.H. and T.A.A.; software, A.P.; validation, S.N.S., R.G.P. and A.G.; formal analysis, M.E.M., H.A.Y. and H.V.J.; investigation, S.N.S., A.A.H., E.K.H. and T.A.A.; resources, S.N.S.; data curation, A.A.H., E.K.H., H.A.Y. and R.G.P.; writing—original draft preparation, S.N.S., A.G. and R.G.P.; writing—review and editing, D.S. and V.G.K.; supervision, S.N.S.; funding acquisition, S.N.S. All authors have read and agreed to the published version of the manuscript.

Funding

The work was supported by the Science Committee of RA, in the frames of research project No. 21AG-1D036.

Institutional Review Board Statement

The study was conducted according to the guidelines of the Declaration of Helsinki, was approved by the Ethics Committee of The Yerevan State Medical University (YSMU; Yerevan, Armenia) (protocol code 5 and date of approval 18 March 2024), followed the “Principles of laboratory animal care”, and was carried out in accordance with the European Communities Council Directive of 24 November 1986 (86/609/EEC).

Informed Consent Statement

Not applicable.

Data Availability Statement

Data are contained within the article and Supplementary Materials.

Conflicts of Interest

Author Victor G. Kartsev was employed by InterBioScreen. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

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Figure 1. 2,7-Naphthyridine derivatives with neurotropic activity. R, R1 = H, alkyl; RNR1 = cyclic amine.
Figure 1. 2,7-Naphthyridine derivatives with neurotropic activity. R, R1 = H, alkyl; RNR1 = cyclic amine.
Pharmaceuticals 18 00597 g001
Scheme 1. Reagents and conditions: (a) amine, EtOH, Et3N, refluxed for 5 h; (b) N2H4.H2O, BuOH, refluxed for 8 h; (c) MeCOCH2COMe, refluxed for 5 h.
Scheme 1. Reagents and conditions: (a) amine, EtOH, Et3N, refluxed for 5 h; (b) N2H4.H2O, BuOH, refluxed for 8 h; (c) MeCOCH2COMe, refluxed for 5 h.
Pharmaceuticals 18 00597 sch001
Scheme 2. Reagents and conditions: (a) NH2OH.HCl, NaOEt, EtOH, refluxed for 15 h.
Scheme 2. Reagents and conditions: (a) NH2OH.HCl, NaOEt, EtOH, refluxed for 15 h.
Pharmaceuticals 18 00597 sch002
Figure 2. Structure–activity relationship study on anticonvulsant activity for pyrazolo [3,4-c]-2,7-naphthyridines 3 and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4.
Figure 2. Structure–activity relationship study on anticonvulsant activity for pyrazolo [3,4-c]-2,7-naphthyridines 3 and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4.
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Figure 3. Graphical representation of Table 4.
Figure 3. Graphical representation of Table 4.
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Figure 4. Graphical representation of Table 5. * p ≤ 0.05 probability level.
Figure 4. Graphical representation of Table 5. * p ≤ 0.05 probability level.
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Figure 5. Graphical representation of Table 6. * p ≤ 0.05 probability level.
Figure 5. Graphical representation of Table 6. * p ≤ 0.05 probability level.
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Figure 6. (A) Two-dimensional interaction diagram of compound 4i docking pose, (B) two-dimensional interaction diagram of Diazepam docking pose, and (C) docked pose of compound 4i in GABAA receptor. (D) Superposition of compound 4i (magenta) and diazepam (green) in GABAA receptor. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
Figure 6. (A) Two-dimensional interaction diagram of compound 4i docking pose, (B) two-dimensional interaction diagram of Diazepam docking pose, and (C) docked pose of compound 4i in GABAA receptor. (D) Superposition of compound 4i (magenta) and diazepam (green) in GABAA receptor. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
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Figure 7. (A) Docked pose of compound 4i and SERT transporter complex; (B) 2D ligand interaction diagram of compound 4i. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
Figure 7. (A) Docked pose of compound 4i and SERT transporter complex; (B) 2D ligand interaction diagram of compound 4i. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
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Figure 8. (A) Superposition of compound 4i (magenta) and alprenolol (green) into 5-HT1A receptor. (B) Two-dimensional ligand interaction diagram alprenolol into 5-HT1A receptor. (C) Two-dimensional ligand interaction diagram for docked compound 4i. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
Figure 8. (A) Superposition of compound 4i (magenta) and alprenolol (green) into 5-HT1A receptor. (B) Two-dimensional ligand interaction diagram alprenolol into 5-HT1A receptor. (C) Two-dimensional ligand interaction diagram for docked compound 4i. Hydrogen bonds are shown as red dotted arrows and hydrophobic interactions as yellow spheres.
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Table 1. Starting compounds: 1, 2, pyrazolo[3,4-c]-2,7-naphthyridines 3, and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4.
Table 1. Starting compounds: 1, 2, pyrazolo[3,4-c]-2,7-naphthyridines 3, and pyrimido[1′,2′:1,5]pyrazolo[3,4-c]-2,7-naphthyridines 4.
CompoundRR1CompoundRR1
1ai-Pr2e/3e/4ei-PrCOOEt
1bBn2f/3f/4fBnMe
1ci-Bu2g/3g/4gBnEt
2a/3a/4ai-PrMe2h/3h/4hBnPh
2b/3b/4bi-PrEt2i/3i/4iBnCH(Ph)2
2c/3c/4ci-PrPh2j/3j/4jBnCOOEt
2d/3d/4di-PrCH(Ph)2
Table 2. Isoxazolo[5,4-c]-2,7-naphthyridines 6.
Table 2. Isoxazolo[5,4-c]-2,7-naphthyridines 6.
CompoundRNR1R2Yield *, %
(For Compounds 6)
5a/6ai-PrPharmaceuticals 18 00597 i00163
5b/6bi-PrPharmaceuticals 18 00597 i00267
5c/6ci-PrPharmaceuticals 18 00597 i00362
5d/6di-BuPharmaceuticals 18 00597 i00465
* Yields after recrystallization.
Table 3. Anticonvulsant activity and toxicity of the examined compounds of 3a,b,d,fi and 4a,d,f,i and the reference drugs.
Table 3. Anticonvulsant activity and toxicity of the examined compounds of 3a,b,d,fi and 4a,d,f,i and the reference drugs.
CompoundED50 * mg/kg (by PTZ Antagonism)TD50 *
mg/kg
LD50 *
mg/kg
TILatency of Convulsions Induced by TSC, min
M ± mI**
Control54.0 ± 2.51.0
3a34.0 (29.6 ÷ 39.1)>200>500>14.766.9 ± 7.11.24
3b32.5 (27.1 ÷ 39.0)>200>500>15.461.0 ± 3.51.13
3d41.2 (35.2 ÷ 48.2)>200>700>17.094.6 ± 9.21.75
3f37.5 (28.8 ÷ 43.1)>200>600>16.064.4 ± 6.91.20
3g38.5 (32.1 ÷ 46.2)>200>700>18.273.4 ± 7.21.40
3h28.5 (23.9 ÷ 33.9)>200>600>21.067.6 ± 8.71.25
3i25.8 (21.5 ÷ 31.0)>200>600>23.366.2 ± 7.91.23
4a33.0 (27.5 ÷ 39.6)>200>600>18.258.8 ± 5.81.10
4d40.0 (32.0 ÷ 50.0)>200>600>15.0110.0 ± 11.52.00
4f44.2 (36.8 ÷ 53.0)>200>700>15.860.2 ± 5.21.15
4i23.8 (19.8 ÷ 28.6)>200>800>33.668.0 ± 6.11.26
Ethosuximide
(200 mg/kg)
155
(117.5 ÷ 204.5)
520
(413 ÷ 655)
1325
(1200 ÷ 1462)
8.50101.0 ± 14.01.87
Diazepam
(2 mg/kg)
0.5
(0.4 ÷ 0.7)
2.7
(1.4 ÷ 5.5)
180
(128.5 ÷ 252.0)
36055.0 ± 3.51.0
* p = 0.05 probability level; I**—an increase in the threshold.
Table 4. Effects of compounds 3a,b,d,fi and 4a,d,f,i and reference drugs in rats in Open Field test.
Table 4. Effects of compounds 3a,b,d,fi and 4a,d,f,i and reference drugs in rats in Open Field test.
CompoundDose
mg/kg
Amount (Absolute Data During 5 min) *
Horizontal DisplacementVertical DisplacementCells
Control18.8 ± 3.24.2 ± 0.70.5 ± 0.2
3a5011.3 ± 2.8 **2.8 ± 0.3 **1.2 ± 0.2 **
3b5012.8 ± 1.6 **2.4 ± 0.7 **1.4 ± 0.3 **
3d508.0 ± 1.1 **1.6 ± 0.4 **1.6 ± 0.5 **
3f505.6 ± 1.4 **0.6 ± 0.4 **2.6 ± 0.2 **
3g5010.2 ± 2.2 **1.2 ± 0.3 **0.9 ± 0.1 **
3h5030.0 ± 4.1 **3.2 ± 0.81.8 ± 0.1 **
3i5033.5 ± 4.2 **6.4 ± 0.7 **4.4 ± 1.1 **
4a5029.0 ± 3.1 **3.4 ± 0.62.5 ± 0.5 **
4d5028.6 ± 2.8 **3.1 ± 0.1 **1.6 ± 0.3 **
4f5010.8 ± 3.3 **2.3 ± 0.8 **2.4 ± 0.6 **
4i5011.6 ± 1.3 **2.1 ± 0.9 **2.7 ± 0.5 **
Ethosuximide20023.8 ± 3.84.8 ± 0.90.6 ± 0.08
Diazepam233.6 ± 4.2 **6.4 ± 1.0 **3.2 ± 0.9 **
* p ≤ 0.05 probability level; ** the differences are statistically significant compared with the control.
Table 5. Effects of compounds 3a,b,d,fi and 4a,d,f,i on the state of “fear and despair” of mice in the EPM model (observation time 5 min).
Table 5. Effects of compounds 3a,b,d,fi and 4a,d,f,i on the state of “fear and despair” of mice in the EPM model (observation time 5 min).
CompoundDose
mg/kg
Time Spent in Closed Arms; /s/ *Number of Entries into Closed Arms *Time Spent in the Center; /s/ *Time Spent in Open Arms; /s/ *
Control278.2 ± 20.07.0 ± 1.221.8 ± 4.4
3a50243.0 ± 16.9 **4.8 ± 1.3 **15.7 ± 4.241.3 ± 13.0 **
3b50228.0 ± 15.9 **3.8 ± 1.7 **34.0 ± 7.2 **38.0 ± 8.7 **
3d50241.0 ± 16.9 **3.2 ± 0.7 **30.0 ± 3.129.0 ± 12.0 **
3f50184.0 ± 21.6 **2.6 ± 0.7 **8.0 ± 1.2 **108.0 ± 22.7 **
3g50230.0 ± 17.0 **3.8 ± 0.9 **26.0 ± 5.644.0 ± 8.1 **
3h50240.0 ± 11.9 **3.9 ± 0.9 **24.0 ± 5.136.0 ± 10.2 **
3i50225.0 ± 23.7 **4.6 ± 0.8 **40.0 ± 5.2 **35.0 ± 6.6 **
4a50105.0 ± 15.0 **4.8 ± 0.9 **33.0 ± 5.7 **162.0 ± 12.6 **
4d50248.0 ± 16.1 **4.2 ± 1.0 **20.0 ± 3.5 **32.0 ± 7.7 **
4f50233.0 ± 21.0 **4.7 ± 1.0 **31.0 ± 5.7 **36.0 ± 5.4 **
4i50238.2 ± 17.8 **3.9 ± 1.1 **38.0 ± 5.5 **24.0 ± 5.5 **
Ethosuximide200245.2 ± 15.08.1 ± 2.554.8 ± 4.7 **
Diazepam2200.5 ± 15.2 **5.5 ± 1.242.5 ± 3.9 **57.0 ± 4.2 **
* p ≤ 0.05 probability level; ** the differences are statistically significant compared with the control.
Table 6. Effects of compounds 3a,b,d,fi and 4a,d,f,i on the Forced Swimming test (observation time 6 min).
Table 6. Effects of compounds 3a,b,d,fi and 4a,d,f,i on the Forced Swimming test (observation time 6 min).
CompoundDose
mg/kg
Latent Period to I
Immobilization (s) *
Total Time of
Immobilization (s) *
Total Time of Active
Swimming (s) *
Control92.0 ± 7.881.0 ± 8.8279.0 ± 23.3
3a50182.0 ± 15.3 **35.5 ± 8.1 **324.5 ± 20.1 **
3b50195.0 ± 15.2 **17.5 ± 2.7342.0 ± 25.3 **
3d50132.5± 9.7 **57.5 ± 9.7 **302.5 ± 20.1 **
3f50220.0 ± 18.6 **12.5 ± 0.6 **347.5 ± 21.0 **
3g50122.0 ± 15.3 **74.5 ± 21.0 **285.5 ± 23.0 **
3h50167.0 ± 11.8 **28.3 ± 7.8 **331.7 ± 21.0 **
3i5085.0 ± 12.0117.5 ± 4.8 **242.5 ± 18.8 **
4a5059.0 ± 10.6 **178.0 ± 15.5 **181.8 ± 19.9 **
4d50156.0 ± 15.8 **16.7 ± 2.7 **343.3 ± 29.7 **
4f5070.0 ± 8.620.0 ± 5.7340.0 ± 27.7 **
4i50245.0 ± 26.4 **101.0 ± 11.1 **259.0 ± 28.0 **
Ethosuximide200105.0 ± 9.698.0 ± 9.9262.0 ± 14.4
Diazepam2174.0 ± 18.1 **24.0 ± 6.6 **336.0 ± 18.9 **
p ≤ 0.05 probability level; ** the differences are statistically significant compared with the control.
Table 7. Molecular docking to GABAA receptor.
Table 7. Molecular docking to GABAA receptor.
No.Est. Binding Energy
(kcal/mol)
I-HResidues Involved in Hydrogen Bond FormationHydrophobic
Interactions
Positive Ionizable Interactions
3a−7.201Thr202 (N···H, 3.18 Å),Tyr62, Leu99, Phe200Asp43
3b−6.961Tyr97 (N···H, 3.23 Å)Thr176, Phe200, Tyr205
3d−6.321Thr202 (N···H, 3.75 Å)Thr176, Phe200, Ala201
3f−6.40Thr176, Phe200
3g−6.721Tyr205 (N···H, 2.76 Å)Tyr62, Thr176, Phe200-
3h−7.721Thr202 (N···H, 3.54 Å)Tyr62, Thr176, Ala201, Phe200-
3i−8.121Thr176 (N···H, 3.20 Å)Ala45, Tyr62, Ala201, Thr202-
4a−6.93Tyr62, Thr176, Ala201, Tyr205-
4d−6.22Ty157, Phe200, Tyr205-
4f−6.56Ala201, Tyr205-
4i−8.812Thr176 (N···H, 3.78 Å), Arg180 (N···H, 3.26 Å)Ala45, Leu99, Val198, Phe200, Ala201, Thr202Asp43
Diazepam−8.901Thr202 (N···H, 2.67 Å)Tyr62, Leu99, Met115, Tyr157, Phe200, Tyr205-
Table 8. Molecular docking in SERT transporter (PDB ID: 3F3A).
Table 8. Molecular docking in SERT transporter (PDB ID: 3F3A).
No.Est. Binding Energy
(kcal/mol)
I-HResidues Involved in Hydrogen Bond FormationResidues Involved
in Hydrophobic
Interactions
Residues
Involved in Aromatic Interactions
3a−4.86----
3b−7.161Arg11 (N···H, 2.57 Å)Asp267, Gly433-
3d−6.40--His7, Arg431-
3f−5.67--His7, Ile441-
3g−6.92--Asp267, Gly433-
3h−6.45--His7, Arg431-
3i−7.481His7 (N···H, 3.25 Å)Asp267, Gly433Lys264
4a−5.58--Asp267, Arg431-
4d−5.29--Asp267, Gly432-
4f−6.26--Gly433-
4i−7.281Gly439 (N···H, 2.54 Å)Ile441Arg11
Table 9. Molecular docking free binding energy (kcal/mol) for 5-HT1A receptor (PDB ID: 3NYA).
Table 9. Molecular docking free binding energy (kcal/mol) for 5-HT1A receptor (PDB ID: 3NYA).
No.Est. Binding Energy (kcal/mol)Residues Involved in Hydrogen Bond FormationResidues Involved in Hydrophobic InteractionsResidues
Involved in Positive Ionizable Interactions
3a−5.80-Thr195, Phe193, Val114, The290-
3b−8.82Tyr316 (N···H, 3.76 Å)Val114, Phe193, Ala200, Phe289, Tyr316, Phe290N-Asp113
3d−6.92-Ala200, Ile309, Asn312-
3f−5.08-Trp286, Asn312-
3g−5.27-Phe193, Trp313, Phe290-
3h−6.17-Trp109, Val117, Phe193, Thr195, Trp286-
3i−7.08Tyr316 (N···H, 3.28 Å)Trp109, Tyr308, Thr195, Ala200, Asn312-
4a−8.25Tyr118 (N···H, 2.74 Å), Tyr316 (N···H, 3.59 Å)Trp109, Tyr308, Phe193, Val114, Tyr110, Ile201, Ala200-
4d−4.30-Ile309, Thr195, Phe193, Trp313-
4f−7.12Tyr316 (N···H, 2.58 Å)Tyr316, Trp286, Asn312, Ala200-
4i−9.10Tyr316 (N···H, 3.04 Å), Tyr316 (N···H, 2.57 Å)Trp109, Trp313, Ile309, Thr195, Phe193, Val114, The290, Tyr308, Val117, Tyr199, Ala200N-Asp113
Alprenolol−13.19Asp113, Asn312, Tyr316Val117, Val114, Thr195, Phe193, Tyr199, Phe290N-Asp113
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Sirakanyan, S.N.; Hakobyan, E.K.; Geronikaki, A.; Spinelli, D.; Petrou, A.; Kartsev, V.G.; Yegoryan, H.A.; Jughetsyan, H.V.; Manukyan, M.E.; Paronikyan, R.G.; et al. Synthesis and Neurotropic Activity of New 5-Piperazinopyrazolo[3,4-c]-2,7-naphthyridines and Isoxazolo[5,4-c]-2,7-naphthyridines. Pharmaceuticals 2025, 18, 597. https://doi.org/10.3390/ph18040597

AMA Style

Sirakanyan SN, Hakobyan EK, Geronikaki A, Spinelli D, Petrou A, Kartsev VG, Yegoryan HA, Jughetsyan HV, Manukyan ME, Paronikyan RG, et al. Synthesis and Neurotropic Activity of New 5-Piperazinopyrazolo[3,4-c]-2,7-naphthyridines and Isoxazolo[5,4-c]-2,7-naphthyridines. Pharmaceuticals. 2025; 18(4):597. https://doi.org/10.3390/ph18040597

Chicago/Turabian Style

Sirakanyan, Samvel N., Elmira K. Hakobyan, Athina Geronikaki, Domenico Spinelli, Anthi Petrou, Victor G. Kartsev, Hasmik A. Yegoryan, Hasmik V. Jughetsyan, Mariam E. Manukyan, Ruzanna G. Paronikyan, and et al. 2025. "Synthesis and Neurotropic Activity of New 5-Piperazinopyrazolo[3,4-c]-2,7-naphthyridines and Isoxazolo[5,4-c]-2,7-naphthyridines" Pharmaceuticals 18, no. 4: 597. https://doi.org/10.3390/ph18040597

APA Style

Sirakanyan, S. N., Hakobyan, E. K., Geronikaki, A., Spinelli, D., Petrou, A., Kartsev, V. G., Yegoryan, H. A., Jughetsyan, H. V., Manukyan, M. E., Paronikyan, R. G., Araqelyan, T. A., & Hovakimyan, A. A. (2025). Synthesis and Neurotropic Activity of New 5-Piperazinopyrazolo[3,4-c]-2,7-naphthyridines and Isoxazolo[5,4-c]-2,7-naphthyridines. Pharmaceuticals, 18(4), 597. https://doi.org/10.3390/ph18040597

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