Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling and Strains
2.2. Phenotypic Analysis
2.3. DNA Extraction, PCR Amplification and Sequencing
2.4. Phylogenetic Analyses
3. Results
3.1. Phylogeny
3.2. Morphological Analysis
3.3. Salt Tolerance Test
3.4. Taxonomy
4. Discussion
5. Concluding Remarks
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Species | Strain Number | Substrate (Country) | GenBank Accession Numbers 1 | Citation | |||
---|---|---|---|---|---|---|---|
ITS | LSU | tef1 | BenA | ||||
A. cavernicola | CGMCC3.19571 T | Bird feces (China) | MK329056 | MK328961 | MK335997 | NA | [12] |
LC 12560 | Animal feces (China) | MK329061 | MK328966 | MK336002 | NA | [12] | |
LC 12674 | Plant debris (China) | MK329065 | MK328970 | MK336006 | NA | [12] | |
A. coprophila | CBS 247.82 T (ex-type of O. coprophila) | Rabbit dung (England) | MH861494 | MH873238 | OQ954487 | OQ981138 | [19]; this study |
CBS 424.88 (received as O. coprophila) | Chipmunk dung (Canada) | OQ942929 | OQ943166 | OQ954488 | OQ981139 | This study | |
CBS 173.71 (received as B. felina) | Porcupine dung (Canada) | AY261368 | MH871833 | OQ954489 | OQ981140 | [19]; this study | |
A. felina | CBS 250.34 (ex-type of I. cretacea) | Pressed yeast (England) | MH855498 | OQ943167 | OQ954490 | OQ981141 | [19]; this study |
CBS 648.66 (received as B. felina) | Unknown (Argentina) | OQ942930 | MH870575 | OQ954491 | OQ981142 | [19]; this study | |
CBS 110.08 (received as B. felina) | Unknown | MH854578 | OQ943168 | OQ954492 | OQ981143 | [19]; this study | |
A. guana | CGMCC3.17908 T | Bat guano (China) | KU746665 | KU746711 | KX855211 | NA | [11] |
CGMCC3.17909 | Bat guano (China) | KU746666 | KU746712 | KX855212 | NA | [11] | |
CBS 312.50 (received as B. felina) | Rabbit dung (Unknown) | MH856641 | MH868150 | OQ954493 | OQ981144 | [19]; this study | |
A. littoralis | FMR 17952 | Floating rubber tire (Spain) | OQ942925 | OQ943162 | OQ954483 | OQ981134 | This study |
FMR 19404 T | Marine sediment (Spain) | OQ942924 | OQ943161 | OQ954482 | OQ981133 | This study | |
FMR 19611 | Marine sediment (Spain) | OQ942926 | OQ943163 | OQ954484 | OQ981135 | This study | |
FMR 20067 | Marine sediment (Spain) | OQ942927 | OQ943164 | OQ954485 | OQ981136 | This study | |
FMR 20149 | Marine sediment (Spain) | OQ942928 | OQ943165 | OQ954486 | OQ981137 | This study |
Species | Colony on PDA * | Colony on OA/SNA * | Microscopic Features | Citation | ||
---|---|---|---|---|---|---|
Color | Diffusible Pigment | Color | Conidiogenous Cells Size (µm) | Conidia Size (µm) | ||
A. cavernicola | Cream yellow to sea shell | Not observed | White | 4.5–8 × 2–3 | 2.5–4 × 2–3.5 | [12]; this study |
A. coprophila | Orange to brownish orange | Grayish orange | Light yellow | 6–10 × 2–2.5 | 3.5–5.5 × 2–3 | [15]; this study |
A. felina | White | Grayish orange | White | 3–8.5 × 2–2.5 | 2.5–4.5 × 2–3.5 | [9]; this study |
A. guana | White to yellowish | Yellowish | White | 7–10 × 2–3 | 4.5–5.5 × 3.5–5 | [11]; this study |
A. littoralis | Greenish yellow | Light yellow | Greenish yellow | 5.5–11.5 × 1.5–2.5 | 2.5–4 × 2.5–3 | This study |
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Guerra-Mateo, D.; Gené, J.; Baulin, V.; Cano-Lira, J.F. Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments. Diversity 2023, 15, 795. https://doi.org/10.3390/d15070795
Guerra-Mateo D, Gené J, Baulin V, Cano-Lira JF. Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments. Diversity. 2023; 15(7):795. https://doi.org/10.3390/d15070795
Chicago/Turabian StyleGuerra-Mateo, Daniel, Josepa Gené, Vladimir Baulin, and José Francisco Cano-Lira. 2023. "Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments" Diversity 15, no. 7: 795. https://doi.org/10.3390/d15070795
APA StyleGuerra-Mateo, D., Gené, J., Baulin, V., & Cano-Lira, J. F. (2023). Phylogeny and Taxonomy of the Genus Amphichorda (Bionectriaceae): An Update on Beauveria-like Strains and Description of a Novel Species from Marine Sediments. Diversity, 15(7), 795. https://doi.org/10.3390/d15070795