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Reaction of 4,5-Dichloro-1,2,3-dithiazolium Chloride with 2-(Phenylsulfonyl)acetonitrile

by
Konstantinos Plakas
1,
Andreas S. Kalogirou
1,*,
Andreas Kourtellaris
2 and
Panayiotis A. Koutentis
2
1
Department of Life Sciences, School of Sciences, European University Cyprus, 6 Diogenis Str., Engomi, P.O. Box 22006, Nicosia 1516, Cyprus
2
Department of Chemistry, University of Cyprus, P.O. Box 20537, Nicosia 1678, Cyprus
*
Author to whom correspondence should be addressed.
Molbank 2022, 2022(1), M1322; https://doi.org/10.3390/M1322
Submission received: 4 January 2022 / Revised: 18 January 2022 / Accepted: 21 January 2022 / Published: 24 January 2022
(This article belongs to the Section Organic Synthesis and Biosynthesis)

Abstract

:
The reaction of 4,5-dichloro-1,2,3-dithiazolium chloride with 2-(phenylsulfonyl)acetonitrile (1 equiv) in the presence of pyridine (2 equiv) gave S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate and (Z)-2-(4-chloro-5H-1,2,3-dithiazol-5-ylidene)-2-(phenylsulfonyl)acetonitrile in 19% and 23% yield, respectively. The compounds were fully characterized and the mechanistic rationale is proposed for the formation of the benzensulfonate.

1. Introduction

Monocyclic 1,2,3-dithiazoles are sulfur-rich heterocycles that act as fungicides [1,2,3], antibacterials [4,5,6], antivirals [7,8] or anticancer agents [9,10,11]. Moreover, 1,2,3-dithiazolyls are potential organic magnets and/or conductors [12,13]. The field of monocyclic 1,2,3-dithiazoles took off over 35 years ago with the preparation of 4,5-dichloro-1,2,3-dithiazolium chloride 1 (aka Appel’s salt, Scheme 1) [14], which has been used extensively for the preparation of many neutral 5H-1,2,3-dithiazoles 2 [15]. The chemistry and applications of 1,2,3-dithiazoles have been reviewed [16,17,18,19].

2. Results and Discussion

Recently, we investigated the biological activity of (5H-1,2,3-dithiazol-5-ylidene)-2-acetonitriles and required access to analogues that can be prepared from the condensation of Appel’s salt 1 with active methylenes [14,20,21]. While preparations for ylidene-acetonitriles 37 [14,20,21,22,23] and their derivatives 812 [24] are reported and the compounds are fully characterized, little is known about the only sulfone analogue 13 (Scheme 2). This compound was reported by Rees in 1992, quoting a low yield (exact number not reported) [25], but the reaction conditions or any characterization data of the product were not reported. We therefore repeated this synthesis to obtain and characterize the desired product 13. Interestingly, the carbonyl-containing (5H-1,2,3-dithiazol-5-ylidene)-2-acetonitriles 47 were assigned as the Z isomers due to stabilizing “non-bonding” interactions between the carbonyl oxygen and the dithiazole [26].
The reaction of Appel’s salt 1 with 2-(phenylsulfonyl)acetonitrile (1 equiv) in DCM, for 1 h, followed by the addition of pyridine (2 equiv) and further stirring for 2 h gave two main products, the colorless S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14) in 19% yield and the yellow colored (Z)-2-(4-chloro-5H-1,2,3-dithiazol-5-ylidene)-2-(phenylsulfonyl)acetonitrile (13) in 23% yield (Scheme 3).
Product 14 was isolated as colorless needles, m.p. 146–147 °C (from c-hexane). FTIR spectroscopy showed a cyano ν(C≡N) stretch at 2236 cm−1 along with sulfone ν(S=O) stretches at 1335 and 1148 cm−1, while mass spectrometry revealed a molecular ion [M + Na+] peak of m/z 339 (100%) along with a [M + Na+ +2] peak at 341 (45%), which supported the presence of a single chlorine. 13C NMR spectroscopy showed the presence of three CH resonances and five quaternary carbon resonances (see Supplementary Materials for the complete spectra), while a correct elemental analysis (CHN) was obtained for the molecular formula C10H5ClN2O2S3. Structural support was also provided by single-crystal X-ray diffraction studies (Figure 1).
Product 13 was isolated as yellow needles, m.p. 181–183 °C (from c-hexane). UV–vis spectroscopy supports an intact dithiazole ring (λmax 433 nm, log ε 4.26). FTIR spectroscopy showed a cyano ν(C≡N) stretch at 2197 cm−1 along with sulfone ν(S=O) stretches at 1315 and 1144 cm−1, while mass spectrometry revealed a molecular ion [M + Na+] peak of m/z 339 (100%) along with a [M + Na+ +2] peak at 341 (44%) that supported the presence of a single chlorine. 13C-NMR spectroscopy showed the presence of three CH resonances and five quaternary carbon resonances (see Supplementary Materials for the complete spectra), while a correct elemental analysis (CHN) was obtained for the molecular formula C10H5ClN2O2S3. We tentatively assigned the alkene geometry as Z owing to steric and electronic repulsion between the C-4 chloride and the sulfonyl group, while a “non-bonding” interaction between the sulfonyl oxygen and the dithiazole S1 is also possible [26].
The formation of isothiazole 14, which is a structural isomer of ylidene 13, is mechanistically interesting. The conversion of (5H-1,2,3-dithiazol-5-ylidene)-2-acetonitriles to isothiazoles occurs in the presence of catalytic chloride [20] or anhydrous HCl or HBr [24], while isothiazoles can also be formed from the reaction of Appel’s salt 1 with enamines [21,27,28]. Tentatively, the reaction herein proceeds via the thiophilic attack of chloride at the S-1 position of dithiazole 13 to form the ring-opened disulfide 15 (Scheme 4). Rotation of the double bond in disulfide 15 enabled by resonance can give the more stable E alkene 16, which can then add chloride to the nitrile and cyclize onto sulfur to give isothiazole 17 with elimination of ‘SCl’. While isothiazole 17 was not observed, we propose that once formed it rapidly reacted its C-4 position with the electrophilic sulfur of either disulfide 15 or 16 to give intermediate 18. Subsequent attack by chloride on the disulfide group can lead to the stepwise migration of the phenylsulfone unit onto the sulfur via the spirocycle 19 and the formation of isothiazole 14. A few examples of such migrations leading to benzenesulfonothioates have been reported and include a thermal rearrangement of aziridines [29], a chlorotropic rearrangement [30] and a photochemical reaction of diphenyl sulfone [31].

3. Materials and Methods

The reaction mixture was monitored by TLC using commercial glass-backed thin-layer chromatography (TLC) plates (Merck Kieselgel 60 F254). The plates were observed under UV light at 254 and 365 nm. The melting point was determined using a PolyTherm-A, Wagner & Munz, Kofler—Hotstage Microscope apparatus (Wagner & Munz, Munich, Germany). The solvent used for recrystallization is indicated after the melting point. The UV–vis spectrum was obtained using a Perkin-Elmer Lambda-25 UV-vis spectrophotometer (Perkin-Elmer, Waltham, MA, USA) and inflections are identified by the abbreviation “inf”. The IR spectrum was recorded on a Shimadzu FTIR-NIR Prestige-21 spectrometer (Shimadzu, Kyoto, Japan) with Pike Miracle Ge ATR accessory (Pike Miracle, Madison, WI, USA) and strong, medium and weak peaks are represented by s, m and w, respectively. 1H and 13C NMR spectra were recorded on a Bruker Avance 500 machine at 500 and 125 MHz, respectively, (Bruker, Billerica, MA, USA). Deuterated solvents were used for homonuclear lock and the signals are referenced to the deuterated solvent peaks. Attached proton test (APT) NMR studies were used for the assignment of the 13C peaks as CH3, CH2, CH and Cq (quaternary). The matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrum (+ve mode) was recorded on a Bruker Autoflex III Smartbeam instrument (Bruker). 4,5-Dichloro-1,2,3-dithiazolium chloride (1) was prepared according to the literature procedure [14].
Reaction of Appel’s Salt 1 with 2-(Phenylsulfonyl)acetonitrile.
To a stirred suspension of 4,5-dichloro-1,2,3-dithiazolium chloride (1) (104.3 mg, 0.50 mmol) in DCM (2 mL) was added 2-(phenylsulfonyl)acetonitrile (90.6 mg, 0.50 mmol) and the reaction mixture was stirred at ca. 20 °C for 1 h. Pyridine (81 μL, 1.00 mmol) was then added and the reaction mixture was stirred for another 2 h. The mixture was then adsorbed onto silica and chromatographed (n-hexane/DCM 50:50) to give S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14) (30.7 mg, 19%) as colorless needles, m.p. 146–147 °C (from c-hexane); Rf 0.33 (n-hexane/DCM 50:50); (found: C, 38.02; H, 1.70; N, 8.65. C10H5ClN2O2S3 requires C, 37.91; H, 1.59; N, 8.84%); λmax(DCM)/nm 252 (log ε 4.36), 294 (4.31); vmax/cm−1 2236w (C≡N), 1454m, 1447m, 1335s (S=O), 1314w, 1294m, 1190m, 1148s (S=O), 1076m, 997w, 959w, 827w, 758m, 718s; δH(500 MHz; CDCl3) 7.76-7.71 (3H, m, Ar CH), 7.58 (2H, dd, J 8.4, 7.5, Ar CH); δC(125 MHz; CDCl3) 165.1 (Cq), 143.9 (Cq), 142.7 (Cq), 135.2 (CH), 130.0 (CH), 129.0 (Cq), 127.5 (CH), 108.1 (Cq); m/z (MALDI-TOF) 357 (M + K++2, 40%), 355 (M + K+, 48), 341 (M + Na++2, 45), 339 (M + Na+, 100), 298 (22), 274 (40), 180 (18), 153 (15), 133 (18). Further elution (n-hexane/DCM 25:75) gave (Z)-2-(4-chloro-5H-1,2,3-dithiazol-5-ylidene)-2-(phenylsulfonyl)acetonitrile (13) (36.8 mg, 23%) as yellow needles, mp 181–183 °C (from c-hexane); Rf 0.37 (n-hexane/DCM 25:75); (found: C, 38.09; H, 1.42; N, 8.61. C10H5ClN2O2S3 requires C, 37.91; H, 1.59; N, 8.84%); λmax(DCM)/nm 267 (log ε 4.16), 283 inf (3.78), 433 (4.26); vmax/cm−1 2197m (C≡N), 1481m, 1470s, 1447m, 1315m (S=O), 1294m, 1190m, 1144s (S=O), 1082m, 1045m, 997w, 916w, 860s, 799w, 760m, 721s; δH(500 MHz; CDCl3) 8.03 (2H, dd, J 8.6, 1.3, Ar CH), 7.76 (1H, ddd, J 7.6, 7.6, 1.2, Ar CH), 7.63 (2H, dd, J 7.9, 7.9, Ar CH); δC(125 MHz; CDCl3) 158.7 (Cq), 143.6 (Cq), 138.1 (Cq), 135.2 (CH), 129.7 (CH), 128.0 (CH), 112.1 (Cq), 103.1 (Cq); m/z (MALDI-TOF) 357 (M + K++2, 9%), 355 (M + K+, 22), 341 (M + Na++2, 44), 339 (M + Na+, 100), 319 (MH++2, 5), 317 (MH+, 17), 133 (35).
X-ray crystallographic studies on S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14).
Data were collected on an Oxford-Diffraction Supernova diffractometer, equipped with a CCD area detector utilizing Cu-Kα radiation (λ = 1.5418 Å). A suitable crystal was attached to glass fibers using paratone-N oil and transferred to a goniostat where they were cooled for data collection. Unit cell dimensions were determined and refined by using 2397 (4.159° ≤ θ ≤ 71.800°) reflections. Empirical absorption corrections (multi-scan based on symmetry-related measurements) were applied using CrysAlis RED software [32]. The structures were solved by direct method and refined on F2 using full-matrix least squares using SHELXL97 [33]. Software packages used: CrysAlis CCD [32] for data collection, CrysAlis RED [32] for cell refinement and data reduction, WINGX for geometric calculations [34], and DIAMOND [35] for molecular graphics. The non-H atoms were treated anisotropically. The hydrogen atoms were placed in calculated, ideal positions and refined as riding on their respective carbon atoms.
Crystal refinement data for S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14): isolated as colorless needles (from DCE/n-pentane vapor diffusion), C10H5ClN2O2S3, M = 316.79, orthorhombic, space group Pna2l, a = 14.6146(12) Å, b = 15.4871(8) Å, c = 5.3576(3) Å, α = 90°, β = 90°, γ = 90°, V = 1212.63(14) Å3, Z = 4, T = 100(2) K, ρcalcd = 1.735 g·cm−3, θmax = 71.800°. Refinement of 163 parameters on 1529 independent reflections out of 2397 measured reflections (Rint = 0.0358) led to R1 = 0.0431 (I > 2σ(I)), wR2 = 0.1141 (all data), and S = 1.211 with the largest difference peak and hole of 0.357 and −0.367 e·Å−3, respectively. (CCDC: 2132438).

Supplementary Materials

The following are available online: mol file, 1H and 13C NMR spectra.

Author Contributions

A.S.K. and P.A.K. conceived the experiments; A.S.K. designed the experiments; K.P. performed the experiments and collected the data; P.A.K. grew the X-ray crystals; A.K. collected the X-ray crystallography data; A.S.K. wrote the paper; A.S.K. and P.A.K. edited the manuscript. All authors have read and agreed to the published version of the manuscript.

Funding

This research was funded by the Cyprus Research Promotion Foundation, grant numbers ΣΤΡAΤHΙΙ/0308/06, NEKYP/0308/02 ΥΓΕΙA/0506/19 and ΕΝΙΣΧ/0308/83.

Acknowledgments

The authors thank the following organizations and companies in Cyprus for generous donations of chemicals and glassware: The State General Laboratory, the Agricultural Research Institute, the Ministry of Agriculture, MedoChemie Ltd. (Limassol, Cyprus), Medisell Ltd. (Nicosia, Cyprus) and Biotronics Ltd. (Nicosia, Cyprus). Furthermore, we thank the A. G. Leventis Foundation for helping to establish the NMR facility at the University of Cyprus.

Conflicts of Interest

The authors declare no conflict of interest. The funders had no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.

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Scheme 1. Structure of Appel’s salt 1 and its neutral 5H-1,2,3-dithiazoles 2.
Scheme 1. Structure of Appel’s salt 1 and its neutral 5H-1,2,3-dithiazoles 2.
Molbank 2022 m1322 sch001
Scheme 2. Synthesis of dithiazole ylidenes.
Scheme 2. Synthesis of dithiazole ylidenes.
Molbank 2022 m1322 sch002
Scheme 3. Reaction of Appel’s salt 1 with 2-(phenylsulfonyl)acetonitrile.
Scheme 3. Reaction of Appel’s salt 1 with 2-(phenylsulfonyl)acetonitrile.
Molbank 2022 m1322 sch003
Figure 1. Geometry of S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14) in the crystal; crystallographic atom numbering. Thermal ellipsoids at 50% probability.
Figure 1. Geometry of S-(3-chloro-5-cyanoisothiazol-4-yl)benzenesulfonothioate (14) in the crystal; crystallographic atom numbering. Thermal ellipsoids at 50% probability.
Molbank 2022 m1322 g001
Scheme 4. Mechanistic rationale of the formation of isothiazole 14.
Scheme 4. Mechanistic rationale of the formation of isothiazole 14.
Molbank 2022 m1322 sch004
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Plakas, K.; Kalogirou, A.S.; Kourtellaris, A.; Koutentis, P.A. Reaction of 4,5-Dichloro-1,2,3-dithiazolium Chloride with 2-(Phenylsulfonyl)acetonitrile. Molbank 2022, 2022, M1322. https://doi.org/10.3390/M1322

AMA Style

Plakas K, Kalogirou AS, Kourtellaris A, Koutentis PA. Reaction of 4,5-Dichloro-1,2,3-dithiazolium Chloride with 2-(Phenylsulfonyl)acetonitrile. Molbank. 2022; 2022(1):M1322. https://doi.org/10.3390/M1322

Chicago/Turabian Style

Plakas, Konstantinos, Andreas S. Kalogirou, Andreas Kourtellaris, and Panayiotis A. Koutentis. 2022. "Reaction of 4,5-Dichloro-1,2,3-dithiazolium Chloride with 2-(Phenylsulfonyl)acetonitrile" Molbank 2022, no. 1: M1322. https://doi.org/10.3390/M1322

APA Style

Plakas, K., Kalogirou, A. S., Kourtellaris, A., & Koutentis, P. A. (2022). Reaction of 4,5-Dichloro-1,2,3-dithiazolium Chloride with 2-(Phenylsulfonyl)acetonitrile. Molbank, 2022(1), M1322. https://doi.org/10.3390/M1322

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