Chronic Kidney Disease in Metabolic Disease: Regulation of SGLT2 and Transcriptomic–Epigenetic Effects of Its Pharmacological Inhibition
Abstract
1. Introduction
2. SGLT2 Expression and Regulation in the Proximal Tubule
2.1. Biphasic Trajectory of SGLT2 Expression in Metabolic Disorder-Associated CKD
2.1.1. Hyperinsulinemia and Hyperglycemia
2.1.2. Pro-Fibrotic and Inflammatory Signaling
2.1.3. Neurohumoral Activity
2.1.4. Excessive Dietary Lipids and Salt
3. Transcriptional and Epigenetic Effects of SGLT2 Inhibition in the Kidneys
Human Data: The Only scRNA-seq Study to Date
4. Knowledge Gaps and Future Directions
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| Ang II | Angiotensin II |
| ARB | Angiotensin receptor blocker |
| ATP | Adenosine triphosphate |
| BP | Blood pressure |
| Btg2 | B-cell translocation gene 2 |
| cAMP | 3′,5′-cyclic adenosine monophosphate |
| CCKBR | Cholecystokinin B receptor |
| CKD | Chronic kidney disease |
| DEG | Differentially expressed gene |
| DKD | Diabetic kidney disease |
| FAO | Fatty acid oxidation |
| H3K27me3 | Trimethylated histone H3 lysine 27 |
| Hmgcs2 | 3-hydroxy-3-methylglutaryl-CoA synthase 2 |
| IL-6 | Interleukin-6 |
| MAPK10 | Mitogen-activated protein kinase 10 |
| mTORC1 | Mechanistic target of rapamycin complex 1 |
| NF-κB | Nuclear factor-kappa B |
| PCR | Polymerase chain reaction |
| PPARδ | Peroxisome proliferator-activated receptor-δ |
| PT | Proximal convoluted tubule |
| RAAS: | Renin–angiotensin–aldosterone system |
| RNA-seq | RNA sequencing |
| RT-qPCR | Real-time quantitative polymerase chain reaction |
| SAM | S-adenosylmethionine |
| scRNA-seq | Single-cell RNA sequencing |
| SGLT2 | Sodium–glucose cotransporter 2 |
| SGLT2i | Sodium–glucose cotransporter 2 inhibitors |
| SNS | Sympathetic nervous system |
| T2DM | Type 2 diabetes mellitus |
| TCA | Tricarboxylic acid cycle |
| TGF-β | Transforming growth factor-β |
| TNF-α | Tumor necrosis factor-α |
| YB-1 | Y-box binding protein-1 |
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| Model | Omics | Exposure | Key Molecular Signals | Post-Intervention Findings |
|---|---|---|---|---|
| Human kidneys (adolescents with T2DM 17) | scRNA-seq 14 | On SGLT2i 16 vs. no SGLT2i 16 (in vivo) | Tubular metabolic rewiring; ↓mTORC1 10 signatures; shifts in stress response pathways [42] | SGLT2is 16 attenuate transcriptional signs of altered renal metabolism |
| Mouse DKD 5 | scRNA-seq 14 | SGLT2i 16 vs. ARB 1 | Restoration of mitochondrial FAO 6 programs [51] | SGLT2is 16 mainly affect mitochondrial function in PT 11 cells; ARB 1 mostly has anti-inflammatory and anti-fibrotic effects [51] |
| Mouse kidneys ± human PT 11 | RNA-seq 12 CUT&RUN | Genetic/pharmacologic SGLT2 15 loss/inhibition | ↑SAM 13 and ↑H3K27me3 7 at the inflammatory loci; repression of inflammatory gene programs [54] | Absence of SGLT2 15 induces protective methylation in the kidneys; SGLT2i 16 mimics anti-inflammatory effects of genetic SGLT2 15 loss [54] |
| Mouse multi-tissue (including the kidneys) | Bulk RNA-seq 12 | Empagliflozin | ↓MAPK10 9 as a key DEG 4; the kidney is the tissue most affected by the transcriptional changes [50] | Empagliflozin influences gene and protein expression across different tissues [50] |
| Mouse DKD 5 | scRNA-seq 14 | SGLT2i 16 | Anti-fibrotic shifts; tubular cell-state remodeling [56] | SGLT2is 16 exert anti-inflammatory effects by modulating cell–cell communication; Hmgcs2 8 and Btg2 3 are SGLT2i 16 targets to ameliorate fibrosis in DKD 5 [56] |
| Mouse DKD 5 | Bulk RNA-seq 12 | Dapagliflozin | DEG 4 in metabolism, energy production, and hypoxia-related stress in PT 11 cells [57] | Dapagliflozin decreases oxygen and ATP 2 consumption in diabetic kidneys [57] |
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Salvà, C.; Kaser, S.; Landolfo, M. Chronic Kidney Disease in Metabolic Disease: Regulation of SGLT2 and Transcriptomic–Epigenetic Effects of Its Pharmacological Inhibition. Int. J. Mol. Sci. 2026, 27, 589. https://doi.org/10.3390/ijms27020589
Salvà C, Kaser S, Landolfo M. Chronic Kidney Disease in Metabolic Disease: Regulation of SGLT2 and Transcriptomic–Epigenetic Effects of Its Pharmacological Inhibition. International Journal of Molecular Sciences. 2026; 27(2):589. https://doi.org/10.3390/ijms27020589
Chicago/Turabian StyleSalvà, Chiara, Susanne Kaser, and Matteo Landolfo. 2026. "Chronic Kidney Disease in Metabolic Disease: Regulation of SGLT2 and Transcriptomic–Epigenetic Effects of Its Pharmacological Inhibition" International Journal of Molecular Sciences 27, no. 2: 589. https://doi.org/10.3390/ijms27020589
APA StyleSalvà, C., Kaser, S., & Landolfo, M. (2026). Chronic Kidney Disease in Metabolic Disease: Regulation of SGLT2 and Transcriptomic–Epigenetic Effects of Its Pharmacological Inhibition. International Journal of Molecular Sciences, 27(2), 589. https://doi.org/10.3390/ijms27020589

