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Review

Urinary Tract Infections: Molecular Determinants of Uropathogenicity and Their Translation into Contemporary Clinical Practice

by
Raul-Lucian Ene
1,2,3,
Roxana Popescu
3,4,
Aurica Elisabeta Cobec
3,5,*,
Melinda Kali
3,4,
Ileana-Adriana Ene
1,6,
Daliborca Cristina Vlad
7,*,
Peter Seropian
8 and
Ionut Marcel Cobec
8,9
1
Doctoral School, Faculty of Medicine, “Victor Babes” University of Medicine and Pharmacy Timisoara, 300041 Timisoara, Romania
2
Department of Urology, Emergency Hospital Petrosani, 332019 Petrosani, Romania
3
ANAPATMOL Research Center, Faculty of Medicine, “Victor Babes” University of Medicine and Pharmacy Timisoara, 300041 Timisoara, Romania
4
Department of Cell and Molecular Biology, “Victor Babes” University of Medicine and Pharmacy Timisoara, 300041 Timisoara, Romania
5
Clinic of Internal Medicine-Cardiology, Klinikum Freudenstadt, 72250 Freudenstadt, Germany
6
Diaverum Petroșani Nephrology and Dialysis Medical Center, 332019 Petrosani, Romania
7
Department of Pharmacology, Faculty of Medicine, “Victor Babes” University of Medicine and Pharmacy, 300041 Timisoara, Romania
8
Clinic of Obstetrics and Gynecology, Klinikum Freudenstadt, 72250 Freudenstadt, Germany
9
Department of Obstetrics and Gynecology, Faculty of Medicine, Medical Center-University of Freiburg, 79106 Freiburg, Germany
*
Authors to whom correspondence should be addressed.
Int. J. Mol. Sci. 2026, 27(18), 8108; https://doi.org/10.3390/ijms27188108
Submission received: 9 July 2026 / Revised: 1 September 2026 / Accepted: 9 September 2026 / Published: 11 September 2026
(This article belongs to the Section Molecular Pathology, Diagnostics, and Therapeutics)

Abstract

Urinary tract infections (UTIs) represent a major global health burden, traditionally defined as microbial invasion of a sterile urinary tract, but now increasingly understood as a state of microbial dysbiosis involving disruption of the urinary microbiome. This review aims to synthesize current knowledge on the molecular mechanisms, etiological agents, clinical classification, and emerging therapeutic strategies in UTIs. The analysis integrates recent advances in microbiome research, molecular pathogenesis, and clinical guidelines. Uropathogenic Escherichia coli (UPEC) remains the predominant pathogen, utilizing virulence factors such as adhesins and intracellular bacterial community formation to establish persistent infection, while other organisms including Klebsiella pneumoniae, Proteus mirabilis, and Enterococcus faecalis contribute to disease complexity. The emergence of multidrug-resistant organisms, particularly among ESKAPE pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter species), poses significant therapeutic challenges through mechanisms such as β-lactamase production, efflux pumps, and biofilm formation. Clinically, evolving classification systems emphasize infection localization rather than host factors, improving diagnostic and therapeutic precision. Diagnostic strategies rely on clinical assessment, urinalysis, and urine culture, while treatment increasingly incorporates antimicrobial stewardship principles. Emerging approaches, including immunoprophylaxis, bacteriophage therapy, and microbiome-targeted interventions, demonstrate promising results. In conclusion, UTIs are complex, multifactorial diseases requiring integrated molecular, clinical, and therapeutic approaches, with future advancements likely driven by precision medicine and artificial intelligence.
Keywords: urinary tract infections; Uropathogenic Escherichia coli (UPEC); urinary microbiome; antimicrobial resistance; ESKAPE pathogens; intracellular bacterial communities; complicated UTI; immunoprophylaxis; bacteriophage therapy urinary tract infections; Uropathogenic Escherichia coli (UPEC); urinary microbiome; antimicrobial resistance; ESKAPE pathogens; intracellular bacterial communities; complicated UTI; immunoprophylaxis; bacteriophage therapy

Share and Cite

MDPI and ACS Style

Ene, R.-L.; Popescu, R.; Cobec, A.E.; Kali, M.; Ene, I.-A.; Vlad, D.C.; Seropian, P.; Cobec, I.M. Urinary Tract Infections: Molecular Determinants of Uropathogenicity and Their Translation into Contemporary Clinical Practice. Int. J. Mol. Sci. 2026, 27, 8108. https://doi.org/10.3390/ijms27188108

AMA Style

Ene R-L, Popescu R, Cobec AE, Kali M, Ene I-A, Vlad DC, Seropian P, Cobec IM. Urinary Tract Infections: Molecular Determinants of Uropathogenicity and Their Translation into Contemporary Clinical Practice. International Journal of Molecular Sciences. 2026; 27(18):8108. https://doi.org/10.3390/ijms27188108

Chicago/Turabian Style

Ene, Raul-Lucian, Roxana Popescu, Aurica Elisabeta Cobec, Melinda Kali, Ileana-Adriana Ene, Daliborca Cristina Vlad, Peter Seropian, and Ionut Marcel Cobec. 2026. "Urinary Tract Infections: Molecular Determinants of Uropathogenicity and Their Translation into Contemporary Clinical Practice" International Journal of Molecular Sciences 27, no. 18: 8108. https://doi.org/10.3390/ijms27188108

APA Style

Ene, R.-L., Popescu, R., Cobec, A. E., Kali, M., Ene, I.-A., Vlad, D. C., Seropian, P., & Cobec, I. M. (2026). Urinary Tract Infections: Molecular Determinants of Uropathogenicity and Their Translation into Contemporary Clinical Practice. International Journal of Molecular Sciences, 27(18), 8108. https://doi.org/10.3390/ijms27188108

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