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Review

Tomato Leaf Color Diversity as a Functional Trait: Molecular Mechanisms, Physiological Significance, and Environmental Responses

1
Coastal Agriculture Research Institute, Kyungpook National University, Daegu 41566, Republic of Korea
2
Department of Semiconductor Engineering, Gachon University, Seongnamdaero, Sujeong-gu, Seongnam-si 13120, Republic of Korea
3
Department of Biological Sciences, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
4
Department of Applied Biosciences, Graduate School, Kyungpook National University, Daegu 41566, Republic of Korea
*
Authors to whom correspondence should be addressed.
These authors contributed equally to this work.
Int. J. Mol. Sci. 2026, 27(14), 6151; https://doi.org/10.3390/ijms27146151
Submission received: 19 June 2026 / Revised: 7 July 2026 / Accepted: 7 July 2026 / Published: 9 July 2026
(This article belongs to the Section Molecular Plant Sciences)

Abstract

Leaf color in tomato (Solanum lycopersicum L.) is a complex and highly informative trait that reflects pigment metabolism, chloroplast development, genetic regulation, hormonal signaling, and environmental influences. This review synthesizes current knowledge on the biological basis and diversity of tomato leaf coloration, with a particular focus on the roles of chlorophylls, carotenoids, anthocyanins, and flavonoids in generating distinct visual phenotypes. It further discusses the molecular and physiological mechanisms associated with key leaf color types, including dark green, pale green, chlorotic, purple, albino, and variegated leaves, and describes how these phenotypes develop through coordinated regulation of pigment biosynthesis, chloroplast biogenesis, and stress-responsive pathways. The review also summarizes the effects of environmental factors such as light, temperature, water availability, nutrient status, salinity, heavy metals, and biotic stress on leaf pigmentation through changes in photosynthetic efficiency and oxidative balance. In addition, hormonal regulation of leaf color is discussed with emphasis on the roles of abscisic acid (ABA), ethylene (ET), cytokinins (CKs), auxins, jasmonic acids (JA), and salicylic acid (SA) in regulating chlorophyll retention and senescence-associated color transitions. Importantly, leaf coloration functions not only as a morphological trait but also as a sensitive biomarker of plant physiological status, enabling early detection of nutrient deficiencies, abiotic stress, and disease. Recent advances in multi-omics approaches, imaging technologies, and machine learning have significantly improved the understanding of the regulatory networks controlling leaf pigmentation and their relationship with crop performance. However, important gaps remain in integrating molecular mechanisms with whole-plant and field-level responses. Future progress will depend on combining systems biology, high-throughput phenotyping, and predictive modeling to translate leaf color studies into practical applications for improving tomato productivity, stress resilience, and climate adaptation.
Keywords: tomato; leaf coloration; pigment metabolism; chloroplast biogenesis; multi-omics tomato; leaf coloration; pigment metabolism; chloroplast biogenesis; multi-omics

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MDPI and ACS Style

Jan, R.; Iqbal, S.; Ali, S.; Kim, K.-M. Tomato Leaf Color Diversity as a Functional Trait: Molecular Mechanisms, Physiological Significance, and Environmental Responses. Int. J. Mol. Sci. 2026, 27, 6151. https://doi.org/10.3390/ijms27146151

AMA Style

Jan R, Iqbal S, Ali S, Kim K-M. Tomato Leaf Color Diversity as a Functional Trait: Molecular Mechanisms, Physiological Significance, and Environmental Responses. International Journal of Molecular Sciences. 2026; 27(14):6151. https://doi.org/10.3390/ijms27146151

Chicago/Turabian Style

Jan, Rahmatullah, Shahzad Iqbal, Sajad Ali, and Kyung-Min Kim. 2026. "Tomato Leaf Color Diversity as a Functional Trait: Molecular Mechanisms, Physiological Significance, and Environmental Responses" International Journal of Molecular Sciences 27, no. 14: 6151. https://doi.org/10.3390/ijms27146151

APA Style

Jan, R., Iqbal, S., Ali, S., & Kim, K.-M. (2026). Tomato Leaf Color Diversity as a Functional Trait: Molecular Mechanisms, Physiological Significance, and Environmental Responses. International Journal of Molecular Sciences, 27(14), 6151. https://doi.org/10.3390/ijms27146151

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