Host Determinants of Immune Checkpoint Inhibitor Efficacy: Immune, Genetic, Metabolic, and Lifestyle Factors
Abstract
1. Introduction
2. Immune System Factors
2.1. Baseline Immune Competence
2.2. T-Cell Repertoire Diversity and Clonal Expansion
2.3. NK Cells and Innate Immunity Contributions
2.4. Cytokine Profile and Systemic Inflammation
2.5. Peripheral Blood Biomarkers
3. Genetics and Epigenetics
3.1. Germline Variants in Immune Checkpoints
3.2. HLA Genotype and Antigen Presentation
3.3. Epigenetic Regulation of Immune Cells
3.4. Pharmacogenomics and Personalized Immunotherapy
4. Microbiome and Metabolome
4.1. Gut Microbiota Composition
4.2. Microbial Metabolites
4.3. Microbiome Modifying Agents and Mechanistic Effects on ICI Response
4.4. Dietary and Lifestyle Influences
4.5. Mechanistic Links to T-Cell Activation
5. Metabolic and Lifestyle Factors
5.1. Obesity, Adipokines, and the Obesity Paradox
5.2. Glucose and Lipid Metabolism in Immune Regulation
5.3. Exercise, Circadian Rhythm, and Immune Function
5.4. Nutrition and Micronutrients
6. Co-Medications and Comorbidities
6.1. Medications Affecting ICI Efficacy
6.2. Chronic Comorbidities
6.3. Interactions Between Drugs, Comorbidities, and Immune Response
7. Translational Applications: Host Targeted Interventions
7.1. Microbiome-Based Therapeutic Strategies
7.1.1. Fecal Microbiota Transplantation (FMT) and Immunotherapy Synergy
7.1.2. Clinical Trials of FMT in Cancer Immunotherapy
7.1.3. Microbiome Modulation in Treatment-Related Toxicity
7.2. Antibiotics and Microbiota Disruption
7.3. Metabolism
7.4. Cytokine Modulation
7.5. Biomarkers for Patient Stratification
7.6. Future Research Directions
8. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
Abbreviations
| ORR | objective response rate |
| CR | complete response |
| FMT | fecal microbiota transplantation |
| NSCLC | non-small cell lung cancer |
| PD-1 | programmed cell death protein 1 |
| PD-(L)1 | programmed death (ligand) 1 |
| GI | gastrointestinal |
| ICI | immune checkpoint inhibitor |
| CD8+ T cells | cytotoxic T lymphocytes |
| NLR | neutrophil-to-lymphocyte ratio |
| HLA | human leukocyte antigen |
| SNP | single nucleotide polymorphism |
| MMR | mismatch repair |
| SCFA | short-chain fatty acid |
| PPI | proton pump inhibitor |
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| Category | Factor | Effect on ICI Response | Mechanism | Clinical Relevance |
|---|---|---|---|---|
| (A) | ||||
| Immune System | High CD8+ T-cell levels | ↑ Improved response [10,12,14] | Enhanced cytotoxic tumor cell killing | Predictive biomarker |
| Immune System | High neutrophil-to-lymphocyte ratio (NLR) | ↓ Reduced response [25] | Systemic inflammation and immune suppression | Prognostic marker |
| Immune System | Expansion of regulatory T cells (Tregs) | ↓ Reduced response [13] | Suppression of effector T-cell activity | Potential therapeutic target |
| Immune System | Favorable cytokine profile (low IL-6, balanced immune signaling) | ↑ Improved response [22,24] | Promotes effective T-cell activation and function | Potential biomarker |
| Genetics | HLA diversity | ↑ Improved response [32,34] | Broader antigen presentation to T cells | Patient stratification |
| Genetics | Germline variants (e.g., IL-7 SNPs, MMR genes) | ↑/↓ Variable [27,31] | Modulation of immune response and tumor immunogenicity | Predictive of efficacy and toxicity |
| Epigenetics | DNA methylation and histone modification | ↑ Potential improvement [35,43] | Regulation of immune-related gene expression | Target for combination therapy |
| (B) | ||||
| Microbiome | Akkermansia muciniphila enrichment | ↑ Improved response [54,56] | Enhanced immune activation and T-cell priming | Modifiable biomarker |
| Microbiome | High microbial diversity | ↑ Potentially improved response (context-dependent) [54,56] | Enhanced immune modulation | Potential predictive marker |
| Microbiome | Dysbiosis (e.g., antibiotic-induced) | ↓ Reduced response [79,88] | Impaired microbial metabolite production and immune signaling | Avoidable risk factor |
| Metabolism | Obesity | Mixed effects (Obesity Pradox) [63,65] | Chronic inflammation and PD-1 upregulation | Context-dependent predictor |
| Metabolism | Hyperglycemia/diabetes | ↓ Reduced response [66,68] | Immune dysfunction and systemic inflammation | Modifiable risk factor |
| Lifestyle | High-fiber diet | ↑ Improved response [56,77] | Increased short-chain fatty acid (SCFA) production | Modifiable factor |
| Lifestyle | Physical activity | ↑ Potential benefit [73] | Enhanced immune cell function and trafficking | Supportive intervention |
| Pharmacologic | Antibiotic use | ↓ Reduced response [79,88] | Disruption of gut microbiota (dysbiosis) | Avoid near ICI initiation if possible |
| Pharmacologic | Baseline corticosteroid use | ↓ Reduced response [91,93] | Systemic immunosuppression | Use cautiously |
| Pharmacologic | Proton pump inhibitor (PPI) use | ↓ Potentially reduced response [81,89,90] | Altered gut microbiota composition | Monitor use |
| Trial/Study | Cancer Type | Patient Population | Intervention | Key Outcomes | Key Findings |
|---|---|---|---|---|---|
| Phase I (early landmark, NCT not reported) | Melanoma | Anti-PD-1-refractory | FMT from responders + anti-PD-1 | 30% ORR (3/10), 1 CR | Microbiome modulation and increased tumor immune activation |
| NCT03341143 | Melanoma | Anti-PD-1-refractory | FMT from responders | ~20% ORR, ~40% disease control | Microbiota engraftment; increased CD8+ T-cell activity |
| NCT03772899 | Advanced melanoma | Treatment-naïve | FMT from healthy donors + nivolumab/pembrolizumab | 65% ORR, 20% CR | Safe; beneficial microbiome changes |
| NCT0495158 | NSCLC & Melanoma | Advanced disease | FMT + anti-PD-1 | 80% ORR (NSCLC), 75% (melanoma) | Reduced harmful taxa; improved outcomes |
| NCT04264975 | Advanced solid tumors | Anti-PD-1-refractory | FMT from responders | 46.2% disease control | Increased cytotoxic T-cell activity |
| NCT05251389 | Melanoma | Anti-PD-1-refractory | FMT from responders vs. non-responders | Ongoing | Evaluating differential clinical benefit |
| NCT04130763 | GI cancers | PDL-1-resistant | FMT from healthy donors + anti-PD-1 | 20% ORR | Donor microbes linked to immune activation |
| MR3622010054 | NSCLC | PD-1 secondary resistance | FMT + PD-1 rechallenge + chemotherapy | 29.6% ORR | Increased microbial diversity and CD8+ T-cell infiltration |
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Awada, A.; Charbel, N.; Faraj, S.; Hassan, M.; Awada, D.; Issa, A.; Nasr, W.; El Meski, S.; Hatahet, Z.; Tarhini, A.; et al. Host Determinants of Immune Checkpoint Inhibitor Efficacy: Immune, Genetic, Metabolic, and Lifestyle Factors. Int. J. Mol. Sci. 2026, 27, 4178. https://doi.org/10.3390/ijms27104178
Awada A, Charbel N, Faraj S, Hassan M, Awada D, Issa A, Nasr W, El Meski S, Hatahet Z, Tarhini A, et al. Host Determinants of Immune Checkpoint Inhibitor Efficacy: Immune, Genetic, Metabolic, and Lifestyle Factors. International Journal of Molecular Sciences. 2026; 27(10):4178. https://doi.org/10.3390/ijms27104178
Chicago/Turabian StyleAwada, Ali, Nicole Charbel, Sary Faraj, Mohammad Hassan, Duha Awada, Andrea Issa, Wajih Nasr, Sara El Meski, Zuhair Hatahet, Ali Tarhini, and et al. 2026. "Host Determinants of Immune Checkpoint Inhibitor Efficacy: Immune, Genetic, Metabolic, and Lifestyle Factors" International Journal of Molecular Sciences 27, no. 10: 4178. https://doi.org/10.3390/ijms27104178
APA StyleAwada, A., Charbel, N., Faraj, S., Hassan, M., Awada, D., Issa, A., Nasr, W., El Meski, S., Hatahet, Z., Tarhini, A., Rizkallah, J., & Kreidieh, F. (2026). Host Determinants of Immune Checkpoint Inhibitor Efficacy: Immune, Genetic, Metabolic, and Lifestyle Factors. International Journal of Molecular Sciences, 27(10), 4178. https://doi.org/10.3390/ijms27104178

