Nature-Inspired Enzymatic Cascades: Emerging Strategies for Sustainable Chemistry
Abstract
1. Introduction
2. Origins of Enzymatic Cascades
2.1. Cell Metabolism as a Source of Inspiration for Organic Synthesis
2.2. The Minimal Cell
2.3. Artificial Metabolism
2.4. Benefits and Challenges of Enzymatic Cascades
3. Cascade Design
3.1. Assembly and Nanotechnology-Based Supports
3.2. Thermodynamics, Kinetics and Pathway Balancing
3.3. Enzyme Promiscuity and Noncanonical Reactivities. The Other Side of the Enzymatic Cascade
3.4. Chimera Enzymatic Cascades
3.5. Analytical, Bioinformatic and AI Tools for Enzymatic Cascades
4. Application of Enzymatic Cascades
4.1. Redox Cascades
4.2. Photo Biocatalytic Cascades
4.3. Electro Biocatalytic Cascades
4.4. Synthesis of Privileged Bioactive Scaffolds
5. Conclusions
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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| Features | Natural | In Vitro | Message from Metabolism | Representative Examples |
|---|---|---|---|---|
| Substrate channeling | Multi-enzyme complexes and tunnels ensure direct transfer of intermediates, preventing build-up of unstable species | Diffusion dominates; spatial proximity alone rarely improves molecular flux | Efficiency comes from structural integration, not mere proximity | Pyruvate dehydrogenase complex; tryptophan synthase tunnel [44,45] |
| Compartmentalization | Organelles and metabolons confine reactions, stabilize intermediates, and regulate flux via selective permeability | Enzymes diluted, intermediates unstable, prone to degradation | Metabolic flux control requires selective barriers and confined volumes | Protocells, coacervates, vesicles and phospholipid membrane as confinement analogues [18,46] |
| Cofactor management | Continuous recycling of NAD(P)H, ATP, SAM sustains catalytic turnover | Cofactor depletion rapidly halts cascades | Orthogonal regeneration mimics metabolic cycles | Central carbon metabolism; artificial NAD(P)H regeneration [45] |
| Switch on/off | Feedback inhibition and signaling pathways act as natural on/off switches | Isolated enzymes lack adaptive feedback; stoichiometry fragile | Metabolic regulation relies on feedback loops and temporal programs | Glycolytic feedback loops; enzymatic logic gates, transient pH oscillations [49,50] |
| Protein dynamics | Conformational motions tune binding, transition-state stabilization and release | In vitro conditions destabilize dynamics | Design inspired by conformational landscapes | Dynamics of dihydrofolate reductase as paradigm [51] |
| Electron transfer | Membrane complexes integrate cofactors (heme, FAD) for efficient long-range ET. | Reconstitution outside membranes is difficult and unstable | Precision architecture is essential for sustained redox cascades | NADPH oxidases; STEAP enzymes [52] |
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© 2026 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license.
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Capecchi, E.; Tomaino, E.; Onnelli, G.; Ubertini, V.; Saladino, R. Nature-Inspired Enzymatic Cascades: Emerging Strategies for Sustainable Chemistry. Molecules 2026, 31, 603. https://doi.org/10.3390/molecules31040603
Capecchi E, Tomaino E, Onnelli G, Ubertini V, Saladino R. Nature-Inspired Enzymatic Cascades: Emerging Strategies for Sustainable Chemistry. Molecules. 2026; 31(4):603. https://doi.org/10.3390/molecules31040603
Chicago/Turabian StyleCapecchi, Eliana, Elisabetta Tomaino, Giulia Onnelli, Valentina Ubertini, and Raffaele Saladino. 2026. "Nature-Inspired Enzymatic Cascades: Emerging Strategies for Sustainable Chemistry" Molecules 31, no. 4: 603. https://doi.org/10.3390/molecules31040603
APA StyleCapecchi, E., Tomaino, E., Onnelli, G., Ubertini, V., & Saladino, R. (2026). Nature-Inspired Enzymatic Cascades: Emerging Strategies for Sustainable Chemistry. Molecules, 31(4), 603. https://doi.org/10.3390/molecules31040603

