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Keywords = q-space diffusion MRI

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22 pages, 3012 KiB  
Article
QSI and DTI of Inherited White Matter Disorders in Rat Spinal Cord: Early Detection and Comparison with Quantitative Electron Microscopy Findings
by Maysa Teixeira Resende, Benjamin K. August, Daniel Z. Radecki, Madelyn Reilly, Abigail Komro, John Svaren, Debbie Anaby, Ian D. Duncan and Yoram Cohen
Diagnostics 2025, 15(7), 837; https://doi.org/10.3390/diagnostics15070837 - 25 Mar 2025
Viewed by 501
Abstract
Background: Inherited white matter (WM) disorders of the central nervous systems (CNS), or leukodystrophies, are devastating diseases that primarily affect children, many of whom die early in life or suffer from long-term disability. Methods: q-Space diffusion MR imaging (QSI) and diffusion tensor [...] Read more.
Background: Inherited white matter (WM) disorders of the central nervous systems (CNS), or leukodystrophies, are devastating diseases that primarily affect children, many of whom die early in life or suffer from long-term disability. Methods: q-Space diffusion MR imaging (QSI) and diffusion tensor MR imaging (DTI) with the same resolution and timing parameters were used to study the spinal cords (SCs) of two myelin mutants that are experimental models of WM diseases of different severity, namely the 28-day-old taiep and Long–Evans Shaker (les) rats. The aim was to verify if and which of the diffusion methodologies used is more suitable for early detection of the milder taiep pathology and to characterize its early phase. We also aimed to compare the diffusion MRI results with quantitative electron microscopy (EM) findings. Results: We found that at this early age (28 days), both QSI and DTI were able to detect the severe les WM pathology, while the milder WM pathology in the SC of the taiep rats was detected only by QSI. An increase in the mean radial displacement (RaDis), representing the MRI axon diameter (AD), and a decrease in the probability for zero displacement (PZD) were observed in the dorsal column (ROI 1) of the taiep SCs. In other WM areas, the same trends were observed but the differences were not of statistical significance. In DTI, we found some lower fractional anisotropy (FA) values in the taiep SCs compared to the controls; however, these differences were not statistically significant. For the more severe les pathology, we observed a dramatic increase in the RaDis values and a large decrease in PZD values in all ROIs examined. There, even the FA values were lower than that of the control SCs in all ROIs, albeit with much smaller statistical significance. These MRI results, which show a higher detectability of WM pathology with heavier diffusion weighting, followed histological findings that showed significant myelin deficiency in the dorsal column in the taiep SCs and a practically complete myelin loss in all WM areas in the les SCs. This study also revealed that, under the experimental conditions used here, the apparent increase in RaDis agrees better with myelin thickness and not with average AD extracted form EM, probably reflecting the effect of water exchange. Conclusions: These results, corroborated by diffusion time-dependent QSI, also imply that while diffusion MRI in general and QSI in particular provide acceptable apparent axon diameter estimations in heathy and mature WM, this appears not to be the case in severely damaged WM where exchange appears to play a more important role. Full article
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25 pages, 23095 KiB  
Article
Order-Aware Uncertainty Minimization Network for Fast High Angular Resolution Diffusion Imaging with Unpaired Data
by Yunlong Gu, Ying Cao, Li Wang, Qijian Chen and Yuemin Zhu
Electronics 2023, 12(13), 2985; https://doi.org/10.3390/electronics12132985 - 6 Jul 2023
Cited by 3 | Viewed by 1483
Abstract
Diffusion magnetic resonance imaging (dMRI) is an indispensable technique in today’s neurological research, but its signal acquisition time is extremely long due to the need to acquire signals in multiple diffusion gradient directions. Supervised deep learning methods often require large amounts of complete [...] Read more.
Diffusion magnetic resonance imaging (dMRI) is an indispensable technique in today’s neurological research, but its signal acquisition time is extremely long due to the need to acquire signals in multiple diffusion gradient directions. Supervised deep learning methods often require large amounts of complete data to support training, whereas dMRI data are difficult to obtain. We propose a deep learning model for the fast reconstruction of high angular resolution diffusion imaging in data-unpaired scenarios. Firstly, two convolutional neural networks were designed for the recovery of k-space and q-space signals, while training with unpaired data was achieved by reducing the uncertainty of the prediction results of different reconstruction orders. Then, we enabled the model to handle noisy data by using graph framelet transform. To evaluate the performance of our model, we conducted detailed comparative experiments using the public dataset from human connectome projects and compared it with various state-of-the-art methods. To demonstrate the effectiveness of each module of our model, we also conducted reasonable ablation experiments. The final results showed that our model has high efficiency and superior reconstruction performance. Full article
(This article belongs to the Section Artificial Intelligence)
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26 pages, 41859 KiB  
Article
Diffusion Weighted Imaging Super-Resolution Algorithm for Highly Sparse Raw Data Sequences
by Krzysztof Malczewski
Sensors 2023, 23(12), 5698; https://doi.org/10.3390/s23125698 - 19 Jun 2023
Cited by 3 | Viewed by 2150
Abstract
The utilization of quick compression-sensed magnetic resonance imaging results in an enhancement of diffusion imaging. Wasserstein Generative Adversarial Networks (WGANs) leverage image-based information. The article presents a novel G-guided generative multilevel network, which leverages diffusion weighted imaging (DWI) input data with constrained sampling. [...] Read more.
The utilization of quick compression-sensed magnetic resonance imaging results in an enhancement of diffusion imaging. Wasserstein Generative Adversarial Networks (WGANs) leverage image-based information. The article presents a novel G-guided generative multilevel network, which leverages diffusion weighted imaging (DWI) input data with constrained sampling. The present study aims to investigate two primary concerns pertaining to MRI image reconstruction, namely, image resolution and reconstruction duration. The implementation of simultaneous k-q space sampling has been found to enhance the performance of Rotating Single-Shot Acquisition (RoSA) without necessitating any hardware modifications. Diffusion weighted imaging (DWI) is capable of decreasing the duration of testing by minimizing the amount of input data required. The synchronization of diffusion directions within PROPELLER blades is achieved through the utilization of compressed k-space synchronization. The grids utilized in DW-MRI are represented by minimal-spanning trees. The utilization of conjugate symmetry in sensing and the Partial Fourier approach has been observed to enhance the efficacy of data acquisition as compared to unaltered k-space sampling systems. The image’s sharpness, edge readings, and contrast have been enhanced. These achievements have been certified by numerous metrics including PSNR and TRE. It is desirable to enhance image quality without necessitating any modifications to the hardware. Full article
(This article belongs to the Section Sensing and Imaging)
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13 pages, 1403 KiB  
Review
The Value of Various Post-Processing Modalities of Diffusion Weighted Imaging in the Detection of Multiple Sclerosis
by Ahmad Joman Alghamdi
Brain Sci. 2023, 13(4), 622; https://doi.org/10.3390/brainsci13040622 - 6 Apr 2023
Cited by 6 | Viewed by 3156
Abstract
Diffusion tensor imaging (DTI) showed its adequacy in evaluating the normal-appearing white matter (NAWM) and lesions in the brain that are difficult to evaluate with routine clinical magnetic resonance imaging (MRI) in multiple sclerosis (MS). Recently, MRI systems have been developed with regard [...] Read more.
Diffusion tensor imaging (DTI) showed its adequacy in evaluating the normal-appearing white matter (NAWM) and lesions in the brain that are difficult to evaluate with routine clinical magnetic resonance imaging (MRI) in multiple sclerosis (MS). Recently, MRI systems have been developed with regard to software and hardware, leading to different proposed diffusion analysis methods such as diffusion tensor imaging, q-space imaging, diffusional kurtosis imaging, neurite orientation dispersion and density imaging, and axonal diameter measurement. These methods have the ability to better detect in vivo microstructural changes in the brain than DTI. These different analysis modalities could provide supplementary inputs for MS disease characterization and help in monitoring the disease’s progression as well as treatment efficacy. This paper reviews some of the recent diffusion MRI methods used for the assessment of MS in vivo. Full article
(This article belongs to the Section Neurotechnology and Neuroimaging)
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16 pages, 2647 KiB  
Review
Imaging Evaluation of Intervertebral Disc Degeneration and Painful Discs—Advances and Challenges in Quantitative MRI
by Shota Tamagawa, Daisuke Sakai, Hidetoshi Nojiri, Masato Sato, Muneaki Ishijima and Masahiko Watanabe
Diagnostics 2022, 12(3), 707; https://doi.org/10.3390/diagnostics12030707 - 14 Mar 2022
Cited by 29 | Viewed by 10457
Abstract
In recent years, various quantitative and functional magnetic resonance imaging (MRI) sequences have been developed and used in clinical practice for the diagnosis of patients with low back pain (LBP). Until now, T2-weighted imaging (T2WI), a visual qualitative evaluation method, has been used [...] Read more.
In recent years, various quantitative and functional magnetic resonance imaging (MRI) sequences have been developed and used in clinical practice for the diagnosis of patients with low back pain (LBP). Until now, T2-weighted imaging (T2WI), a visual qualitative evaluation method, has been used to diagnose intervertebral disc (IVD) degeneration. However, this method has limitations in terms of reproducibility and inter-observer agreement. Moreover, T2WI observations do not directly relate with LBP. Therefore, new sequences such as T2 mapping, T1ρ mapping, and MR spectroscopy have been developed as alternative quantitative evaluation methods. These new quantitative MRIs can evaluate the anatomical and physiological changes of IVD degeneration in more detail than conventional T2WI. However, the values obtained from these quantitative MRIs still do not directly correlate with LBP, and there is a need for more widespread use of techniques that are more specific to clinical symptoms such as pain. In this paper, we review the state-of-the-art methodologies and future challenges of quantitative MRI as an imaging diagnostic tool for IVD degeneration and painful discs. Full article
(This article belongs to the Special Issue Paradigm Shift of Spinal Diagnosis and Treatment)
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