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Keywords = polar auxin transport (PAT)

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20 pages, 6004 KiB  
Article
The Effects of Auxin Transport Inhibition on the Formation of Various Leaf and Vein Patterns
by Carol L. Wenzel, David M. Holloway and Jim Mattsson
Plants 2024, 13(18), 2566; https://doi.org/10.3390/plants13182566 - 12 Sep 2024
Cited by 1 | Viewed by 1320
Abstract
Polar auxin transport (PAT) is a known component controlling leaf complexity and venation patterns in some model plant species. Evidence indicates that PAT generates auxin converge points (CPs) that in turn lead to local leaf formation and internally into major vein formation. However, [...] Read more.
Polar auxin transport (PAT) is a known component controlling leaf complexity and venation patterns in some model plant species. Evidence indicates that PAT generates auxin converge points (CPs) that in turn lead to local leaf formation and internally into major vein formation. However, the role of PAT in more diverse leaf arrangements and vein patterns is largely unknown. We used the pharmacological inhibition of PAT in developing pinnate tomato, trifoliate clover, palmate lupin, and bipinnate carrot leaves and observed dosage-dependent reduction to simple leaves in these eudicots. Leaf venation patterns changed from craspedodromous (clover, carrot), semi-craspedodromous (tomato), and brochidodromous (lupin) to more parallel patterning with PAT inhibition. The visualization of auxin responses in transgenic tomato plants showed that discrete and separate CPs in control plants were replaced by diffuse convergence areas near the margin. These effects indicate that PAT plays a universal role in the formation of different leaf and vein patterns in eudicot species via a mechanism that depends on the generation as well as the separation of auxin CPs. Computer simulations indicate that variations in PAT can alter the number of CPs, corresponding leaf lobe formation, and the position of major leaf veins along the leaf margin in support of experimental results. Full article
(This article belongs to the Special Issue Advances in Plant Auxin Biology)
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18 pages, 15743 KiB  
Article
Expression of CsSCL1 and Rooting Response in Chestnut Leaves Are Dependent on the Auxin Polar Transport and the Ontogenetic Origin of the Tissues
by Elena Varas, Silvia Valladares, Jesús Vielba, Nieves Vidal and Conchi Sánchez
Plants 2023, 12(14), 2657; https://doi.org/10.3390/plants12142657 - 16 Jul 2023
Cited by 1 | Viewed by 1458
Abstract
The mechanisms underlying the de novo regeneration of adventitious roots are still poorly understood, particularly in trees. We developed a system for studying adventitious rooting (AR) at physiological and molecular levels using leaves excised from chestnut microshoots of the same genotype but with [...] Read more.
The mechanisms underlying the de novo regeneration of adventitious roots are still poorly understood, particularly in trees. We developed a system for studying adventitious rooting (AR) at physiological and molecular levels using leaves excised from chestnut microshoots of the same genotype but with two distinct ontogenetic origins that differ in rooting competence. Leaves were treated with auxin and N-1-naphthyl-phthalamic acid (NPA), an inhibitor of auxin polar transport (PAT). The physiological effects were investigated by recording rooting rates and the number and quality of the roots. Molecular responses were examined by localizing and monitoring the changes in the expression of CsSCL1, an auxin-inducible gene in juvenile and mature shoots during AR. The rooting response of leaves was ontogenetic-stage dependent and similar to that of the donor microshoots. Initiation of root primordia and root development were inhibited by application of NPA, although its effect depended on the timing of application. CsSCL1 was upregulated by auxin only in rooting-competent leaves during the novo root organogenesis, and the expression was reduced by NPA. The inhibitory effect on gene expression was detected during the reprograming of rooting competent cells towards root initials in response to auxin, indicating that PAT-mediated upregulation of CsSCL1 is required in the initial steps of AR in chestnut leaves. The localized expression of CsSCL1 in the quiescent center (QC) also suggests a role for this gene in the maintenance of meristematic competence and root radial patterning. Full article
(This article belongs to the Special Issue Application of Biotechnology to Woody Propagation)
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15 pages, 937 KiB  
Opinion
Organ Patterning at the Shoot Apical Meristem (SAM): The Potential Role of the Vascular System
by Alicja Banasiak and Edyta M. Gola
Symmetry 2023, 15(2), 364; https://doi.org/10.3390/sym15020364 - 30 Jan 2023
Cited by 3 | Viewed by 4048
Abstract
Auxin, which is transported in the outermost cell layer, is one of the major players involved in plant organ initiation and positioning at the shoot apical meristem (SAM). However, recent studies have recognized the role of putative internal signals as an important factor [...] Read more.
Auxin, which is transported in the outermost cell layer, is one of the major players involved in plant organ initiation and positioning at the shoot apical meristem (SAM). However, recent studies have recognized the role of putative internal signals as an important factor collaborating with the well-described superficial pathway of organogenesis regulation. Different internal signals have been proposed; however, their nature and transport route have not been precisely determined. Therefore, in this mini-review, we aimed to summarize the current knowledge regarding the auxin-dependent regulation of organ positioning at the SAM and to discuss the vascular system as a potential route for internal signals. In addition, as regular organ patterning is a universal phenomenon, we focus on the role of the vasculature in this process in the major lineages of land plants, i.e., bryophytes, lycophytes, ferns, gymnosperms, and angiosperms. Full article
(This article belongs to the Section Life Sciences)
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20 pages, 5634 KiB  
Article
The Interconnected Relationship between Auxin Concentration Gradient Changes in Chinese Fir Radial Stems and Dynamic Cambial Activity
by Liwei Yang and Sheng Zhu
Forests 2022, 13(10), 1698; https://doi.org/10.3390/f13101698 - 15 Oct 2022
Cited by 5 | Viewed by 2211
Abstract
Auxin has been shown to exhibit a striking concentration gradient distribution in radial sections of angiosperm and gymnosperm species, in which peak auxin levels are concentrated in dividing cambial cells, while the absolute auxin concentration sharply declines toward developing secondary phloem and xylem [...] Read more.
Auxin has been shown to exhibit a striking concentration gradient distribution in radial sections of angiosperm and gymnosperm species, in which peak auxin levels are concentrated in dividing cambial cells, while the absolute auxin concentration sharply declines toward developing secondary phloem and xylem regions. The coincidence of auxin concentration gradient across shoot tissues and xylem cell developmental gradient has prompted that auxin could act as “a plant morphogen” to provide a positional signal for cambial cell development. However, the specific location of vascular cambium and the lack of mutants altering auxin distribution in shoots of woody species made further verification experiments difficult to explore. To address this issue, different concentrations of exogenous IAA were applied to decapitated Chinese fir (Cunninghamia lanceolata (Lamb.) Hook.) trunks in this study to induce the change in the auxin concentration gradient in radial stems, and its effects on cambial activities were examined on the physiological, cellular and molecular levels. Our findings manifested that exogenous IAA treatments resulted in vast changes in endogenous hormone concentrations (including IAA, ZR, GA3 and ABA), cambial cell developmental behaviors and transcriptional activities of genes related to polar auxin transport (PAT), auxin signaling, the biosynthesis and signal transduction of other plant hormones and the genetic control of cambial activity. Based on above findings, we postulated a model of auxin concentration gradient involved in the control of cambial activity and secondary growth in tree trunks. In this model, the contrasting expression of AUX1/LAX and PIN family carriers in distinct Chinese fir wood-forming tissues dynamically modulates PAT into the cambial zone adjacent to the secondary phloem side and secondary xylem tissues, resulting in a sharp and wide auxin spatial gradient distribution across shoots in different stages of secondary growth, respectively. This change in auxin concentration gradient distribution in radial sections in turn acts on cambial developmental behaviors by modulating the expression of auxin signaling genes and key transcription factors and the production of other plant hormones in distinct woody tissues. Findings in this study provide important insights for understanding the biological significance of auxin concentration gradient existing in the radial stems of woody species. Full article
(This article belongs to the Special Issue Forest Tree Breeding and Directed Cultivation Techniques)
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17 pages, 4316 KiB  
Article
Mutation of OsPIN1b by CRISPR/Cas9 Reveals a Role for Auxin Transport in Modulating Rice Architecture and Root Gravitropism
by Huihui Wang, Qiqi Ouyang, Chong Yang, Zhuoyan Zhang, Dianyun Hou, Hao Liu and Huawei Xu
Int. J. Mol. Sci. 2022, 23(16), 8965; https://doi.org/10.3390/ijms23168965 - 11 Aug 2022
Cited by 16 | Viewed by 3975
Abstract
The distribution and content of auxin within plant tissues affect a variety of important growth and developmental processes. Polar auxin transport (PAT), mainly mediated by auxin influx and efflux transporters, plays a vital role in determining auxin maxima and gradients in plants. The [...] Read more.
The distribution and content of auxin within plant tissues affect a variety of important growth and developmental processes. Polar auxin transport (PAT), mainly mediated by auxin influx and efflux transporters, plays a vital role in determining auxin maxima and gradients in plants. The auxin efflux carrier PIN-FORMED (PIN) family is one of the major protein families involved in PAT. Rice (Oryza sativa L.) genome possesses 12 OsPIN genes. However, the detailed functions of OsPIN genes involved in regulating the rice architecture and gravity response are less well understood. In the present study, OsPIN1b was disrupted by CRISPR/Cas9 technology, and its roles in modulating rice architecture and root gravitropism were investigated. Tissue-specific analysis showed that OsPIN1b was mainly expressed in roots, stems and sheaths at the seedling stage, and the transcript abundance was progressively decreased during the seedling stages. Expression of OsPIN1b could be quickly and greatly induced by NAA, indicating that OsPIN1b played a vital role in PAT. IAA homeostasis was disturbed in ospin1b mutants, as evidenced by the changed sensitivity of shoot and root to NAA and NPA treatment, respectively. Mutation of OsPIN1b resulted in pleiotropic phenotypes, including decreased growth of shoots and primary roots, reduced adventitious root number in rice seedlings, as well as shorter and narrower leaves, increased leaf angle, more tiller number and decreased plant height and panicle length at the late developmental stage. Moreover, ospin1b mutants displayed a curly root phenotype cultured with tap water regardless of lighting conditions, while nutrient solution culture could partially rescue the curly root phenotype in light and almost completely abolish this phenotype in darkness, indicating the involvement of the integration of light and nutrient signals in root gravitropism regulation. Additionally, amyloplast sedimentation was impaired in the peripheral tiers of the ospin1b root cap columella cell, while it was not the main contributor to the abnormal root gravitropism. These data suggest that OsPIN1b not only plays a vital role in regulating rice architecture but also functions in regulating root gravitropism by the integration of light and nutrient signals. Full article
(This article belongs to the Special Issue Regulatory Mechanisms of Auxin in Plant Growth and Development)
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20 pages, 6320 KiB  
Article
Membrane Sterol Composition in Arabidopsis thaliana Affects Root Elongation via Auxin Biosynthesis
by Meng Wang, Panpan Li, Yao Ma, Xiang Nie, Markus Grebe and Shuzhen Men
Int. J. Mol. Sci. 2021, 22(1), 437; https://doi.org/10.3390/ijms22010437 - 4 Jan 2021
Cited by 17 | Viewed by 4436
Abstract
Plant membrane sterol composition has been reported to affect growth and gravitropism via polar auxin transport and auxin signaling. However, as to whether sterols influence auxin biosynthesis has received little attention. Here, by using the sterol biosynthesis mutant cyclopropylsterol isomerase1-1 (cpi1-1) [...] Read more.
Plant membrane sterol composition has been reported to affect growth and gravitropism via polar auxin transport and auxin signaling. However, as to whether sterols influence auxin biosynthesis has received little attention. Here, by using the sterol biosynthesis mutant cyclopropylsterol isomerase1-1 (cpi1-1) and sterol application, we reveal that cycloeucalenol, a CPI1 substrate, and sitosterol, an end-product of sterol biosynthesis, antagonistically affect auxin biosynthesis. The short root phenotype of cpi1-1 was associated with a markedly enhanced auxin response in the root tip. Both were neither suppressed by mutations in polar auxin transport (PAT) proteins nor by treatment with a PAT inhibitor and responded to an auxin signaling inhibitor. However, expression of several auxin biosynthesis genes TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS1 (TAA1) was upregulated in cpi1-1. Functionally, TAA1 mutation reduced the auxin response in cpi1-1 and partially rescued its short root phenotype. In support of this genetic evidence, application of cycloeucalenol upregulated expression of the auxin responsive reporter DR5:GUS (β-glucuronidase) and of several auxin biosynthesis genes, while sitosterol repressed their expression. Hence, our combined genetic, pharmacological, and sterol application studies reveal a hitherto unexplored sterol-dependent modulation of auxin biosynthesis during Arabidopsis root elongation. Full article
(This article belongs to the Section Molecular Plant Sciences)
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19 pages, 1695 KiB  
Review
The Roles of Auxin Biosynthesis YUCCA Gene Family in Plants
by Xu Cao, Honglei Yang, Chunqiong Shang, Sang Ma, Li Liu and Jialing Cheng
Int. J. Mol. Sci. 2019, 20(24), 6343; https://doi.org/10.3390/ijms20246343 - 16 Dec 2019
Cited by 155 | Viewed by 18952
Abstract
Auxin plays essential roles in plant normal growth and development. The auxin signaling pathway relies on the auxin gradient within tissues and cells, which is facilitated by both local auxin biosynthesis and polar auxin transport (PAT). The TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (TAA)/YUCCA (YUC) [...] Read more.
Auxin plays essential roles in plant normal growth and development. The auxin signaling pathway relies on the auxin gradient within tissues and cells, which is facilitated by both local auxin biosynthesis and polar auxin transport (PAT). The TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (TAA)/YUCCA (YUC) pathway is the most important and well-characterized pathway that plants deploy to produce auxin. YUCs function as flavin-containing monooxygenases (FMO) catalyzing the rate-limiting irreversible oxidative decarboxylation of indole-3-pyruvate acid (IPyA) to form indole-3-acetic acid (IAA). The spatiotemporal dynamic expression of different YUC gene members finely tunes the local auxin biosynthesis in plants, which contributes to plant development as well as environmental responses. In this review, the recent advances in the identification, evolution, molecular structures, and functions in plant development and stress response regarding the YUC gene family are addressed. Full article
(This article belongs to the Section Molecular Plant Sciences)
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23 pages, 7123 KiB  
Article
CRK5 Protein Kinase Contributes to the Progression of Embryogenesis of Arabidopsis thaliana
by Abu Imran Baba, Ildikó Valkai, Nitin M. Labhane, Lilla Koczka, Norbert Andrási, Éva Klement, Zsuzsanna Darula, Katalin F. Medzihradszky, László Szabados, Attila Fehér, Gábor Rigó and Ágnes Cséplő
Int. J. Mol. Sci. 2019, 20(24), 6120; https://doi.org/10.3390/ijms20246120 - 4 Dec 2019
Cited by 27 | Viewed by 5686
Abstract
The fine tuning of hormone (e.g., auxin and gibberellin) levels and hormone signaling is required for maintaining normal embryogenesis. Embryo polarity, for example, is ensured by the directional movement of auxin that is controlled by various types of auxin transporters. Here, we present [...] Read more.
The fine tuning of hormone (e.g., auxin and gibberellin) levels and hormone signaling is required for maintaining normal embryogenesis. Embryo polarity, for example, is ensured by the directional movement of auxin that is controlled by various types of auxin transporters. Here, we present pieces of evidence for the auxin-gibberellic acid (GA) hormonal crosstalk during embryo development and the regulatory role of the Arabidopsis thaliana Calcium-Dependent Protein Kinase-Related Kinase 5 (AtCRK5) in this regard. It is pointed out that the embryogenesis of the Atcrk5-1 mutant is delayed in comparison to the wild type. This delay is accompanied with a decrease in the levels of GA and auxin, as well as the abundance of the polar auxin transport (PAT) proteins PIN1, PIN4, and PIN7 in the mutant embryos. We have previously showed that AtCRK5 can regulate the PIN2 and PIN3 proteins either directly by phosphorylation or indirectly affecting the GA level during the root gravitropic and hypocotyl hook bending responses. In this manuscript, we provide evidence that the AtCRK5 protein kinase can in vitro phosphorylate the hydrophilic loops of additional PIN proteins that are important for embryogenesis. We propose that AtCRK5 can govern embryo development in Arabidopsis through the fine tuning of auxin-GA level and the accumulation of certain polar auxin transport proteins. Full article
(This article belongs to the Special Issue Plant Cell and Organism Development)
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21 pages, 3156 KiB  
Article
AtCRK5 Protein Kinase Exhibits a Regulatory Role in Hypocotyl Hook Development during Skotomorphogenesis
by Abu Imran Baba, Norbert Andrási, Ildikó Valkai, Teréz Gorcsa, Lilla Koczka, Zsuzsanna Darula, Katalin F. Medzihradszky, László Szabados, Attila Fehér, Gábor Rigó and Ágnes Cséplő
Int. J. Mol. Sci. 2019, 20(14), 3432; https://doi.org/10.3390/ijms20143432 - 12 Jul 2019
Cited by 23 | Viewed by 5099
Abstract
Seedling establishment following germination requires the fine tuning of plant hormone levels including that of auxin. Directional movement of auxin has a central role in the associated processes, among others, in hypocotyl hook development. Regulated auxin transport is ensured by several transporters (PINs, [...] Read more.
Seedling establishment following germination requires the fine tuning of plant hormone levels including that of auxin. Directional movement of auxin has a central role in the associated processes, among others, in hypocotyl hook development. Regulated auxin transport is ensured by several transporters (PINs, AUX1, ABCB) and their tight cooperation. Here we describe the regulatory role of the Arabidopsis thaliana CRK5 protein kinase during hypocotyl hook formation/opening influencing auxin transport and the auxin-ethylene-GA hormonal crosstalk. It was found that the Atcrk5-1 mutant exhibits an impaired hypocotyl hook establishment phenotype resulting only in limited bending in the dark. The Atcrk5-1 mutant proved to be deficient in the maintenance of local auxin accumulation at the concave side of the hypocotyl hook as demonstrated by decreased fluorescence of the auxin sensor DR5::GFP. Abundance of the polar auxin transport (PAT) proteins PIN3, PIN7, and AUX1 were also decreased in the Atcrk5-1 hypocotyl hook. The AtCRK5 protein kinase was reported to regulate PIN2 protein activity by phosphorylation during the root gravitropic response. Here it is shown that AtCRK5 can also phosphorylate in vitro the hydrophilic loops of PIN3. We propose that AtCRK5 may regulate hypocotyl hook formation in Arabidopsis thaliana through the phosphorylation of polar auxin transport (PAT) proteins, the fine tuning of auxin transport, and consequently the coordination of auxin-ethylene-GA levels. Full article
(This article belongs to the Special Issue Kinase Signal Transduction 1.0)
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20 pages, 8173 KiB  
Article
Ontogenetic Changes in Auxin Biosynthesis and Distribution Determine the Organogenic Activity of the Shoot Apical Meristem in pin1 Mutants
by Alicja Banasiak, Magdalena Biedroń, Alicja Dolzblasz and Mateusz Adam Berezowski
Int. J. Mol. Sci. 2019, 20(1), 180; https://doi.org/10.3390/ijms20010180 - 6 Jan 2019
Cited by 17 | Viewed by 5419
Abstract
In the shoot apical meristem (SAM) of Arabidopsis, PIN1-dependent polar auxin transport (PAT) regulates two crucial developmental processes: organogenesis and vascular system formation. However, the knockout mutation in the PIN1 gene does not fully inhibit these two processes. Therefore, we investigated a [...] Read more.
In the shoot apical meristem (SAM) of Arabidopsis, PIN1-dependent polar auxin transport (PAT) regulates two crucial developmental processes: organogenesis and vascular system formation. However, the knockout mutation in the PIN1 gene does not fully inhibit these two processes. Therefore, we investigated a potential source of auxin for organogenesis and vascularization during inflorescence stem development. We analyzed auxin distribution in wild-type (WT) and pin1 mutant plants using a refined protocol of auxin immunolocalization; auxin activity, with the response reporter pDR5:GFP; and expression of auxin biosynthesis genes YUC1 and YUC4. Our results revealed that regardless of the functionality of PIN1-mediated PAT, auxin is present in the SAM and vascular strands. In WT plants, auxin always accumulates in all cells of the SAM, whereas in pin1 mutants, its localization within the SAM changes ontogenetically and is related to changes in the structure of the vascular system, organogenic activity of SAM, and expression levels of YUC1 and YUC4 genes. Our findings indicate that the presence of auxin in the meristem of pin1 mutants is an outcome of at least two PIN1-independent mechanisms: acropetal auxin transport from differentiated tissues with the use of vascular strands and auxin biosynthesis within the SAM. Full article
(This article belongs to the Special Issue Auxins and Cytokinins in Plant Development)
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21 pages, 1852 KiB  
Article
Functional Analysis of the Arabidopsis thaliana CDPK-Related Kinase Family: AtCRK1 Regulates Responses to Continuous Light
by Abu Imran Baba, Gábor Rigó, Ferhan Ayaydin, Ateeq Ur Rehman, Norbert Andrási, Laura Zsigmond, Ildikó Valkai, János Urbancsok, Imre Vass, Taras Pasternak, Klaus Palme, László Szabados and Ágnes Cséplő
Int. J. Mol. Sci. 2018, 19(5), 1282; https://doi.org/10.3390/ijms19051282 - 25 Apr 2018
Cited by 32 | Viewed by 9096
Abstract
The Calcium-Dependent Protein Kinase (CDPK)-Related Kinase family (CRKs) consists of eight members in Arabidopsis. Recently, AtCRK5 was shown to play a direct role in the regulation of root gravitropic response involving polar auxin transport (PAT). However, limited information is available about [...] Read more.
The Calcium-Dependent Protein Kinase (CDPK)-Related Kinase family (CRKs) consists of eight members in Arabidopsis. Recently, AtCRK5 was shown to play a direct role in the regulation of root gravitropic response involving polar auxin transport (PAT). However, limited information is available about the function of the other AtCRK genes. Here, we report a comparative analysis of the Arabidopsis CRK genes, including transcription regulation, intracellular localization, and biological function. AtCRK transcripts were detectable in all organs tested and a considerable variation in transcript levels was detected among them. Most AtCRK proteins localized at the plasma membrane as revealed by microscopic analysis of 35S::cCRK-GFP (Green Fluorescence Protein) expressing plants or protoplasts. Interestingly, 35S::cCRK1-GFP and 35S::cCRK7-GFP had a dual localization pattern which was associated with plasma membrane and endomembrane structures, as well. Analysis of T-DNA insertion mutants revealed that AtCRK genes are important for root growth and control of gravitropic responses in roots and hypocotyls. While Atcrk mutants were indistinguishable from wild type plants in short days, Atcrk1-1 mutant had serious growth defects under continuous illumination. Semi-dwarf phenotype of Atcrk1-1 was accompanied with chlorophyll depletion, disturbed photosynthesis, accumulation of singlet oxygen, and enhanced cell death in photosynthetic tissues. AtCRK1 is therefore important to maintain cellular homeostasis during continuous illumination. Full article
(This article belongs to the Special Issue Plasma-Membrane Transport)
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12 pages, 526 KiB  
Review
Cellular Auxin Transport in Algae
by Suyun Zhang and Bert Van Duijn
Plants 2014, 3(1), 58-69; https://doi.org/10.3390/plants3010058 - 27 Jan 2014
Cited by 21 | Viewed by 7836
Abstract
The phytohormone auxin is one of the main directors of plant growth and development. In higher plants, auxin is generated in apical plant parts and transported from cell-to-cell in a polar fashion. Auxin is present in all plant phyla, and the existence of [...] Read more.
The phytohormone auxin is one of the main directors of plant growth and development. In higher plants, auxin is generated in apical plant parts and transported from cell-to-cell in a polar fashion. Auxin is present in all plant phyla, and the existence of polar auxin transport (PAT) is well established in land plants. Algae are a group of relatively simple, autotrophic, photosynthetic organisms that share many features with land plants. In particular, Charophyceae (a taxon of green algae) are closest ancestors of land plants. In the study of auxin function, transport and its evolution, the algae form an interesting research target. Recently, proof for polar auxin transport in Chara species was published and auxin related research in algae gained more attention. In this review we discuss auxin transport in algae with respect to land plants and suggest directions for future studies. Full article
(This article belongs to the Special Issue Auxin Signaling, Transport, and Metabolism)
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