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Keywords = perennial ryegrass persistence

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19 pages, 2090 KiB  
Article
Predicting Perennial Ryegrass Cultivars and the Presence of an Epichloë Endophyte in Seeds Using Near-Infrared Spectroscopy (NIRS)
by Simone Vassiliadis, Kathryn M. Guthridge, Priyanka Reddy, Emma J. Ludlow, Inoka K. Hettiarachchige and Simone J. Rochfort
Sensors 2025, 25(4), 1264; https://doi.org/10.3390/s25041264 - 19 Feb 2025
Viewed by 610
Abstract
Perennial ryegrass is an important temperate grass used for forage and turf worldwide. It forms symbiotic relationships with endophytic fungi (endophytes), conferring pasture persistence and resistance to herbivory. Endophyte performance can be influenced by the host genotype, as well as environmental factors such [...] Read more.
Perennial ryegrass is an important temperate grass used for forage and turf worldwide. It forms symbiotic relationships with endophytic fungi (endophytes), conferring pasture persistence and resistance to herbivory. Endophyte performance can be influenced by the host genotype, as well as environmental factors such as seed storage conditions. It is therefore critical to confirm seed quality and purity before a seed is sown. DNA-based methods are often used for quality control purposes. Recently, near-infrared spectroscopy (NIRS) coupled with hyperspectral imaging was used to discriminate perennial ryegrass cultivars and endophyte presence in individual seeds. Here, a NIRS-based analysis of bulk seeds was used to develop models for discriminating perennial ryegrass cultivars (Alto, Maxsyn, Trojan and Bronsyn), each hosting a suite of eight to eleven different endophyte strains. Sub-sampling, six per bag of seed, was employed to minimize misclassification error. Using a nested PLS-DA approach, cultivars were classified with an overall accuracy of 94.1–98.6% of sub-samples, whilst endophyte presence or absence was discriminated with overall accuracies between 77.8% and 96.3% of sub-samples. Hierarchical classification models were developed to discriminate bulked seed samples quickly and easily with minimal misclassifications of cultivars (<8.9% of sub-samples) or endophyte status within each cultivar (<11.3% of sub-samples). In all cases, greater than four of the six sub-samples were correctly classified, indicating that innate variation within a bag of seeds can be overcome using this strategy. These models could benefit turf- and pasture-based industries by providing a tool that is easy, cost effective, and can quickly discriminate seed bulks based on cultivar and endophyte content. Full article
(This article belongs to the Special Issue Spectroscopy for Biochemical Imaging and Sensing)
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19 pages, 4264 KiB  
Article
Evaluation of the Relationship between Cultivar, Endophyte and Environment on the Expression of Persistence in Perennial Ryegrass Populations Using High-Throughput Phenotyping
by Chinthaka Jayasinghe, Joe Jacobs, Anna Thomson and Kevin Smith
Agronomy 2023, 13(9), 2292; https://doi.org/10.3390/agronomy13092292 - 30 Aug 2023
Cited by 4 | Viewed by 1826
Abstract
Perennial ryegrass (Lolium perenne L.) is a commonly grown pasture species in temperate agriculture, mainly serving as a primary energy source for dairy cows. However, its limited persistence often leads to missed production potential and early resowing, especially in countries that experience [...] Read more.
Perennial ryegrass (Lolium perenne L.) is a commonly grown pasture species in temperate agriculture, mainly serving as a primary energy source for dairy cows. However, its limited persistence often leads to missed production potential and early resowing, especially in countries that experience summer drought, e.g., Australia and New Zealand. Therefore, understanding the factors influencing perennial ryegrass pasture persistence is crucial for sustainable land management and climate resilience in pasture-based animal production systems. Significant gaps in knowledge exist regarding the factors influencing pasture persistence, as the number of conducted studies in this area remains limited. This study aimed to investigate the factors influencing the expression of persistence in perennial ryegrass populations using airborne and ground-based sensors. A field experiment was conducted in the southwest region of Victoria, Australia, involving ten commercial perennial ryegrass cultivar–endophyte combinations in two different populations. Persistence was evaluated using sensor-based and conventional pasture measurements over two consecutive autumns. The results revealed significant fixed effects of cultivar, endophyte, and environment and their interactions on persistence traits of perennial ryegrass. Cultivars Alto, Samson, and One50 exhibited high levels of persistence when infected with novel endophyte strains. Furthermore, prolonged environmental stresses were found to drive directional selection within pasture populations. The findings emphasise the importance of selecting appropriate cultivar–endophyte combinations and early detection of signs of poor persistence to optimise sward longevity and financial returns from pasture-based animal production systems. This study fills a knowledge gap regarding the factors influencing pasture persistence and provides valuable insights for sustainable pasture management strategies. Full article
(This article belongs to the Special Issue Grassland and Pasture Ecological Management and Utilization)
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14 pages, 1216 KiB  
Article
Incorporating Plantain with Perennial Ryegrass-White Clover in a Dairy Grazing System: Dry Matter Yield, Botanical Composition, and Nutritive Value Response to Sowing Rate, Plantain Content and Season
by Thi Truong Nguyen, Soledad Navarrete, David J. Horne, Daniel J. Donaghy and Peter D. Kemp
Agronomy 2022, 12(11), 2789; https://doi.org/10.3390/agronomy12112789 - 9 Nov 2022
Cited by 17 | Viewed by 3463
Abstract
Incorporating plantain with perennial ryegrass and white clover (RGWC) can improve the quality and quantity of grazing pastures; however, the sowing rate could affect the persistence of plantain, pasture yield, and nutritive value in different seasons. The objective of this study was to [...] Read more.
Incorporating plantain with perennial ryegrass and white clover (RGWC) can improve the quality and quantity of grazing pastures; however, the sowing rate could affect the persistence of plantain, pasture yield, and nutritive value in different seasons. The objective of this study was to evaluate the effect of increasing sowing rates of plantain when established with RGWC on the dry matter (DM) yield, botanical composition, nutritive value, and bioactive compounds of the pasture over the first two years after sowing; and to determine the relationship between plantain content and nutritive characteristics in different seasons. The pasture treatments were RGWC, RGWC + low plantain rate (PLL), RGWC + medium plantain rate (PLM), and RGWC + high plantain rate (PLH). The results showed that annual DM yield was similar between treatments. The average plantain content (including leaves and reproductive stem) was 32, 44, and 48% in PLL, PLM, and PLH, respectively. The plantain composition increased in the first 15 months, then declined rapidly to about 20–30% at day 705 after sowing. Compared with RGWC, the plantain-RGWC pastures (PLL, PLM, PLH) had a higher content of organic matter digestibility (OMD), ash, starch, non-structural carbohydrates (NSC), P, S, Ca, Mg, Na, Cl, Zn, B, Co, aucubin, acteoside, and catalpol, while they contained a lower composition of DM%, acid detergent fibre (ADF), neutral detergent fibre (NDF), crude fat (CF), Fe, and Mn. These differences were linearly associated with the content of plantain leaves in the pasture and were higher in summer and autumn than in spring. In conclusion, incorporating plantain into the RGWC pasture can improve herbage nutritive quality, thus potentially increasing farm productivity and environmental benefits. However, further work is required to investigate management interventions to sustain plantain content beyond two years from sowing. Full article
(This article belongs to the Section Grassland and Pasture Science)
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15 pages, 502 KiB  
Article
A Retrospective Analysis of White Clover (Trifolium repens L.) Content Fluctuation in Perennial Ryegrass (Lolium perenne L.) Swards under 4 Years of Intensive Rotational Dairy Grazing
by Áine Murray, Luc Delaby, Trevor J. Gilliland, Bríd McClearn, Michael Dineen, Clare Guy and Brian McCarthy
Agriculture 2022, 12(4), 549; https://doi.org/10.3390/agriculture12040549 - 12 Apr 2022
Cited by 7 | Viewed by 3807
Abstract
The objective of this study was to examine fluctuations in white clover (Trifolium repens L.) content in perennial ryegrass (Lolium perenne L.) swards within a high nitrogen (250 kg N/ha) input grazing dairy system. The data came from a larger, overall [...] Read more.
The objective of this study was to examine fluctuations in white clover (Trifolium repens L.) content in perennial ryegrass (Lolium perenne L.) swards within a high nitrogen (250 kg N/ha) input grazing dairy system. The data came from a larger, overall system experiment within which all management and growing condition variables were categorised each year for the 40 paddocks that contained perennial ryegrass-white clover swards, over four growing years. Within that study, eight perennial ryegrass cultivars were examined, each sown individually with two white clover cultivars in a 50:50 mix of ‘Chieftain’ and ‘Crusader’. To determine management associations and meteorological patterns with white clover content and rate/direction of change, separate generalised linear models were used to analyse each individual management or meteorological variable. Paddocks with high white clover contents were associated with lower pre- and post-grazing sward heights, lower pasture cover over the winter period and shorter over-winter period. Perennial ryegrass cultivars with lower pre- and post-grazing height, lower pre-grazing pasture mass and pasture yield removed, all retained more white clover in their swards. Soil fertility remained a key factor that affected white clover persistence influencing the degree of responses in all treatments, particularly soil phosphorus (P) levels. Beyond this, higher white clover contents and lower rates of white clover decline were associated with paddocks that received lower rainfall, had higher soil moisture deficits and received more radiation into the base of the sward, particularly around the time of grazing. Full article
(This article belongs to the Section Agricultural Systems and Management)
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20 pages, 420 KiB  
Review
Antagonism to Plant Pathogens by Epichloë Fungal Endophytes—A Review
by Stuart D. Card, Daniel A. Bastías and John R. Caradus
Plants 2021, 10(10), 1997; https://doi.org/10.3390/plants10101997 - 24 Sep 2021
Cited by 35 | Viewed by 4869
Abstract
Epichloë is a genus of filamentous fungal endophytes that has co-evolved with cool-season grasses with which they form long-term, symbiotic associations. The most agriculturally important associations for pasture persistence for grazing livestock are those between asexual vertically transmitted Epichloë strains and the pasture [...] Read more.
Epichloë is a genus of filamentous fungal endophytes that has co-evolved with cool-season grasses with which they form long-term, symbiotic associations. The most agriculturally important associations for pasture persistence for grazing livestock are those between asexual vertically transmitted Epichloë strains and the pasture species, perennial ryegrass, and tall fescue. The fungus confers additional traits to their host grasses including invertebrate pest deterrence and drought tolerance. Selected strains of these mutualistic endophytes have been developed into highly efficacious biocontrol products and are widely utilized within the Americas, Australia, and New Zealand for pasture persistence. Less publicized is the antagonism Epichloë endophytes display towards multiple species of saprophytic and pathogenic microbes. This opinion piece will review the current literature on antimicrobial properties exhibited by this genus of endophyte and discuss the reasons why this trait has historically remained a research curiosity rather than a trait of commercial significance. Full article
(This article belongs to the Special Issue Fungal Endophytes against Plant Pathogenic Fungi)
19 pages, 5120 KiB  
Article
High-Throughput Ground Cover Classification of Perennial Ryegrass (Lolium Perenne L.) for the Estimation of Persistence in Pasture Breeding
by Chinthaka Jayasinghe, Pieter Badenhorst, Joe Jacobs, German Spangenberg and Kevin Smith
Agronomy 2020, 10(8), 1206; https://doi.org/10.3390/agronomy10081206 - 17 Aug 2020
Cited by 3 | Viewed by 4076
Abstract
Perennial ryegrass (Lolium perenne L.) is one of the most important forage grass species in temperate regions of Australia and New Zealand. However, it can have poor persistence due to a low tolerance to both abiotic and biotic stresses. A major challenge [...] Read more.
Perennial ryegrass (Lolium perenne L.) is one of the most important forage grass species in temperate regions of Australia and New Zealand. However, it can have poor persistence due to a low tolerance to both abiotic and biotic stresses. A major challenge in measuring persistence in pasture breeding is that the assessment of pasture survival depends on ranking populations based on manual ground cover estimation. Ground cover measurements may include senescent and living tissues and can be measured as percentages or fractional units. The amount of senescent pasture present in a sward may indicate changes in plant growth, development, and resistance to abiotic and biotic stresses. The existing tools to estimate perennial ryegrass ground cover are not sensitive enough to discriminate senescent ryegrass from soil. This study aimed to develop a more precise sensor-based phenomic method to discriminate senescent pasture from soil. Ground-based RGB images, airborne multispectral images, ground-based hyperspectral data, and ground truth samples were taken from 54 perennial ryegrass plots three years after sowing. Software packages and machine learning scripts were used to develop a pipeline for high-throughput data extraction from sensor-based platforms. Estimates from the high-throughput pipeline were positively correlated with the ground truth data (p < 0.05). Based on the findings of this study, we conclude that the RGB-based high-throughput approach offers a precision tool to assess perennial ryegrass persistence in pasture breeding programs. Improvements in the spatial resolution of hyperspectral and multispectral techniques would then be used for persistence estimation in mixed swards and other monocultures. Full article
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11 pages, 2172 KiB  
Article
An Object-Based Image Analysis Approach to Assess Persistence of Perennial Ryegrass (Lolium perenne L.) in Pasture Breeding
by Chinthaka Jayasinghe, Pieter Badenhorst, Junping Wang, Joe Jacobs, German Spangenberg and Kevin Smith
Agronomy 2019, 9(9), 501; https://doi.org/10.3390/agronomy9090501 - 30 Aug 2019
Cited by 9 | Viewed by 4068
Abstract
Perennial ryegrass (Lolium perenne L.) is one of the most important forage grass species in temperate regions of the world, but it is prone to having poor persistence due to the incidence of abiotic and biotic stresses. This creates a challenge for [...] Read more.
Perennial ryegrass (Lolium perenne L.) is one of the most important forage grass species in temperate regions of the world, but it is prone to having poor persistence due to the incidence of abiotic and biotic stresses. This creates a challenge for livestock producers to use their agricultural lands more productively and intensively within sustainable limits. Breeding perennial ryegrass cultivars that are both productive and persistent is a target of forage breeding programs and will allow farmers to select appropriate cultivars to deliver the highest profitability over the lifetime of a sward. Conventional methods for the estimation of pasture persistence depend on manual ground cover estimation or counting the number of surviving plants or tillers in a given area. Those methods are subjective, time-consuming and/or labour intensive. This study aimed to develop a phenomic method to evaluate the persistence of perennial ryegrass cultivars in field plots. Data acquisition was conducted three years after sowing to estimate the persistence of perennial ryegrass using high-resolution aerial-based multispectral and ground-based red, green and blue(RGB) sensors, and subsequent image analysis. There was a strong positive relationship between manual ground cover and sensor-based ground cover estimates (p < 0.001). Although the manual plant count was positively correlated with sensor-based ground cover (p < 0.001) intra-plot plant size variation influenced the strength of this relationship. We conclude that object-based ground cover estimation is most suitable for use in large-scale breeding programs due to its higher accuracy, efficiency and repeatability. With further development, this technique could be used to assess temporal changes of perennial ryegrass persistence in experimental studies and on a farm scale. Full article
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16 pages, 853 KiB  
Article
Use and Effects of Different Brassica and Other Rotation Crops on Soilborne Diseases and Yield of Potato
by Robert P. Larkin and Ryan P. Lynch
Horticulturae 2018, 4(4), 37; https://doi.org/10.3390/horticulturae4040037 - 30 Oct 2018
Cited by 35 | Viewed by 5940
Abstract
Soilborne diseases are persistent problems in potato production, resulting in reductions in tuber quality and yield. Brassica rotation crops may reduce soilborne potato diseases, but how to best utilize Brassica crops in potato cropping systems has not been established. In this research, two [...] Read more.
Soilborne diseases are persistent problems in potato production, resulting in reductions in tuber quality and yield. Brassica rotation crops may reduce soilborne potato diseases, but how to best utilize Brassica crops in potato cropping systems has not been established. In this research, two two-year trials were established at three different sites with histories of soilborne diseases, and up to six different Brassica crops (canola, winter rapeseed, yellow and brown condiment mustards, oriental mustard, oilseed radish, and a mustard blend) and standard rotation crops (ryegrass and buckwheat) were evaluated as rotation and green manure crops. Tuber yield did not vary substantially among the rotation crops, but rotation treatments significantly affected incidence and severity of soilborne diseases at all sites. However, results were variable among sites and years. Perennial ryegrass and mustard blend rotations reduced powdery scab disease by 31–55% relative to other rotations in the only field where powdery scab was a serious problem. Mustard blend, ryegrass, and other Brassica rotations also reduced common scab, silver scurf, and black scurf at various sites, but not consistently at all sites. At one site, mustard blend and barley/ryegrass rotations reduced black scurf (by 21–58%) and common scab (by 13–34%) relative to no rotation. Overall, disease control was not correlated with biofumigation potential or rotation crop biomass production. Although both Brassica and non-Brassica rotations provided disease reduction in potato cropping systems, no single rotation crop performed consistently better than several others. Full article
(This article belongs to the Special Issue Horticultural Plant Pathology and Prevention)
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