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Keywords = micro-electrode dot array (MEDA)

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15 pages, 1615 KB  
Article
Simultaneous Routing with Washing Droplets Based on Shape-Dependent Velocity Model in MEDA Biochips
by Chiharu Shiro, Hiroki Nishikawa, Xiangbo Kong, Hiroyuki Tomiyama and Shigeru Yamashita
Biosensors 2025, 15(8), 533; https://doi.org/10.3390/bios15080533 - 14 Aug 2025
Viewed by 582
Abstract
Micro Electrode Dot Array (MEDA) biochips have recently attracted considerable attention in the biochemical and medical industries. MEDA biochips manipulate micro droplets for biochemical experiments such as DNA analysis. Droplets on MEDA biochips are moved using the Electrowetting on Dielectric (EWOD) effect, but [...] Read more.
Micro Electrode Dot Array (MEDA) biochips have recently attracted considerable attention in the biochemical and medical industries. MEDA biochips manipulate micro droplets for biochemical experiments such as DNA analysis. Droplets on MEDA biochips are moved using the Electrowetting on Dielectric (EWOD) effect, but a portion of a droplet may remain on a cell after passing through, contaminating the cell. Other droplets cannot pass through a contaminated cell. In previous studies, contaminated cells were considered unavailable for droplet routing. As the number of contaminated cells increases, droplets may be prevented from moving to the desired position. Therefore, we propose a method for simultaneous routing of target functional and washing droplets based on a shape-dependent velocity model. In a simulation, the proposed method reduced the routing time by about 10% compared with an existing method. Full article
(This article belongs to the Special Issue Microfluidics for Biomedical Applications (3rd Edition))
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17 pages, 1763 KB  
Article
Target-Guided Droplet Routing on MEDA Biochips Considering Shape-Dependent Velocity Models and Droplet Splitting
by Yuta Hamachiyo, Chiharu Shiro, Hiroki Nishikawa, Hiroyuki Tomiyama and Shigeru Yamashita
Biosensors 2025, 15(8), 500; https://doi.org/10.3390/bios15080500 - 3 Aug 2025
Viewed by 756
Abstract
In recent years, digital microfluidic biochips (DMFBs), based on microfluidic technology, have attracted attention as compact and flexible experimental devices. DMFBs are widely applied in biochemistry and medical fields, including point-of-care clinical diagnostics and PCR testing. Among them, micro electrode dot array (MEDA) [...] Read more.
In recent years, digital microfluidic biochips (DMFBs), based on microfluidic technology, have attracted attention as compact and flexible experimental devices. DMFBs are widely applied in biochemistry and medical fields, including point-of-care clinical diagnostics and PCR testing. Among them, micro electrode dot array (MEDA) biochips, composed of numerous microelectrodes, have overcome the limitations of conventional chips by enabling finer droplet manipulation and real-time sensing, thus significantly improving experimental efficiency. While various studies have been conducted to enhance the utilization of MEDA biochips, few have considered the shape-dependent velocity characteristics of droplets in routing. Moreover, methods that do take such characteristics into account often face significant challenges in solving time. This study proposes a fast droplet routing method for MEDA biochips that incorporates shape-dependent velocity characteristics by utilizing the distance information to the target cell. The experimental results demonstrate that the proposed method achieves approximately a 67.5% reduction in solving time compared to existing methods, without compromising solution quality. Full article
(This article belongs to the Special Issue Feature Papers of Biosensors)
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10 pages, 7585 KB  
Article
Monitoring Escherichia coli in Water through Real-Time Loop-Mediated Isothermal Amplification on Biochips
by Yuxin Wang, Yun-Sheng Chan, Eugene Lee, Donglu Shi, Chen-Yi Lee and Jiajie Diao
Micromachines 2024, 15(9), 1112; https://doi.org/10.3390/mi15091112 - 31 Aug 2024
Cited by 2 | Viewed by 2852
Abstract
Access to clean water is fundamental to public health and safety, serving as the cornerstone of well-being in communities. Despite the significant investments of millions of dollars in water testing and treatment processes, the United States continues to grapple with over 7 million [...] Read more.
Access to clean water is fundamental to public health and safety, serving as the cornerstone of well-being in communities. Despite the significant investments of millions of dollars in water testing and treatment processes, the United States continues to grapple with over 7 million waterborne-related cases annually. This persistent challenge underscores the pressing need for the development of a new, efficient, rapid, low-cost, and reliable method for ensuring water quality. The urgency of this endeavor cannot be overstated, as it holds the potential to safeguard countless lives and mitigate the pervasive risks associated with contaminated water sources. In this study, we introduce a biochip LAMP assay tailored for water source monitoring. Our method swiftly detects even extremely low concentrations of Escherichia coli (E. coli) in water, and 10 copies/μL of E. coli aqueous solution could yield positive results within 15 min on a PC-MEDA biochip. This innovation marks a significant departure from the current reliance on lab-dependent methods, which typically necessitate several days for bacterial culture and colony counting. Our multifunctional biochip system not only enables the real-time LAMP testing of crude E. coli samples but also holds promise for future modifications to facilitate on-site usage, thereby revolutionizing water quality assessment and ensuring rapid responses to potential contamination events. Full article
(This article belongs to the Special Issue Microfluidic Systems for Biomedical Analysis, Detection and Diagnosis)
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10 pages, 4584 KB  
Article
Programmable Digital-Microfluidic Biochips for SARS-CoV-2 Detection
by Yuxin Wang, Yun-Sheng Chan, Matthew Chae, Donglu Shi, Chen-Yi Lee and Jiajie Diao
Bioengineering 2023, 10(8), 923; https://doi.org/10.3390/bioengineering10080923 - 3 Aug 2023
Cited by 5 | Viewed by 3332
Abstract
Biochips, a novel technology in the field of biomolecular analysis, offer a promising alternative to conventional testing equipment. These chips integrate multiple functions within a single system, providing a compact and efficient solution for various testing needs. For biochips, a pattern-control micro-electrode-dot-array (MEDA) [...] Read more.
Biochips, a novel technology in the field of biomolecular analysis, offer a promising alternative to conventional testing equipment. These chips integrate multiple functions within a single system, providing a compact and efficient solution for various testing needs. For biochips, a pattern-control micro-electrode-dot-array (MEDA) is a new, universally viable design that can replace microchannels and other micro-components. In a Micro Electrode Dot Array (MEDA), each electrode can be programmatically controlled or dynamically grouped, allowing a single chip to fulfill the diverse requirements of different tests. This capability not only enhances flexibility, but also contributes to cost reduction by eliminating the need for multiple specialized chips. In this paper, we present a visible biochip testing system for tracking the entire testing process in real time, and describe our application of the system to detect SARS-CoV-2. Full article
(This article belongs to the Section Nanobiotechnology and Biofabrication)
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13 pages, 2080 KB  
Article
Minimization of MEDA Biochip-Size in Droplet Routing
by Chiharu Shiro, Hiroki Nishikawa, Xiangbo Kong, Hiroyuki Tomiyama and Shigeru Yamashita
Biosensors 2022, 12(5), 277; https://doi.org/10.3390/bios12050277 - 27 Apr 2022
Cited by 4 | Viewed by 2718
Abstract
With the increasing demand for fast, accurate, and reliable biological sensor systems, miniaturized systems have been aimed at droplet-based sensor systems and have been promising. A micro-electrode dot array (MEDA) biochip, which is one kind of the miniaturized systems for biochemical protocols such [...] Read more.
With the increasing demand for fast, accurate, and reliable biological sensor systems, miniaturized systems have been aimed at droplet-based sensor systems and have been promising. A micro-electrode dot array (MEDA) biochip, which is one kind of the miniaturized systems for biochemical protocols such as dispensing, dilutions, mixing, and so on, has become widespread due to enabling dynamical control of the droplets in microfluidic manipulations. In MEDA biochips, the electrowetting-on-dielectric (EWOD) technique stands out since it can actuate droplets with nano/picoliter volumes. Microelectrode cells on MEDA actuate multiple droplets simultaneously to route locations for the purpose of the biochemical operations. Taking advantage of the feature, droplets are often routed in parallel to achieve high-throughput outcomes. Regarding parallel manipulation of multiple droplets, however, the droplets are known to be initially placed at a distant position to avoid undesirable mixing. The droplets thus result in traveling a long way for a manipulation, and the required biochip size for routing is also enlarged. This paper proposes a routing method for droplets to reduce the biochip size on a MEDA biochip with the allowance of splitting during routing operations. We mathematically derive the routing problem, and the experiments demonstrate that our proposal can significantly reduce the biochip size by 70.8% on average, compared to the state-of-the-art method. Full article
(This article belongs to the Section Biosensor and Bioelectronic Devices)
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22 pages, 1305 KB  
Review
Advances in Testing Techniques for Digital Microfluidic Biochips
by Vineeta Shukla, Fawnizu Azmadi Hussin, Nor Hisham Hamid and Noohul Basheer Zain Ali
Sensors 2017, 17(8), 1719; https://doi.org/10.3390/s17081719 - 27 Jul 2017
Cited by 18 | Viewed by 10596
Abstract
With the advancement of digital microfluidics technology, applications such as on-chip DNA analysis, point of care diagnosis and automated drug discovery are common nowadays. The use of Digital Microfluidics Biochips (DMFBs) in disease assessment and recognition of target molecules had become popular during [...] Read more.
With the advancement of digital microfluidics technology, applications such as on-chip DNA analysis, point of care diagnosis and automated drug discovery are common nowadays. The use of Digital Microfluidics Biochips (DMFBs) in disease assessment and recognition of target molecules had become popular during the past few years. The reliability of these DMFBs is crucial when they are used in various medical applications. Errors found in these biochips are mainly due to the defects developed during droplet manipulation, chip degradation and inaccuracies in the bio-assay experiments. The recently proposed Micro-electrode-dot Array (MEDA)-based DMFBs involve both fluidic and electronic domains in the micro-electrode cell. Thus, the testing techniques for these biochips should be revised in order to ensure proper functionality. This paper describes recent advances in the testing technologies for digital microfluidics biochips, which would serve as a useful platform for developing revised/new testing techniques for MEDA-based biochips. Therefore, the relevancy of these techniques with respect to testing of MEDA-based biochips is analyzed in order to exploit the full potential of these biochips. Full article
(This article belongs to the Special Issue Microfluidic Sensors and Control Devices)
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