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Keywords = karst tiankeng

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16 pages, 3503 KiB  
Article
Evidence for the Use of Karst Tiankengs as Shelters: The Effect of Karst Tiankengs on Genetic Diversity and Population Differentiation in Manglietia aromatica
by Yishan Yang, Jianmin Tang, Xianliang Zhu, Lipo Pan, Rong Zou, Yunsheng Jiang and Xiao Wei
Forests 2024, 15(4), 576; https://doi.org/10.3390/f15040576 - 22 Mar 2024
Cited by 3 | Viewed by 4486
Abstract
Karst tiankengs in China are globally significant locations for studying ecological environments and plant diversity. However, there are few reports on how the unique geographical environment of tiankengs affects plant genetic diversity and genetic structure. This study used Hyper-seq gene sequencing technology to [...] Read more.
Karst tiankengs in China are globally significant locations for studying ecological environments and plant diversity. However, there are few reports on how the unique geographical environment of tiankengs affects plant genetic diversity and genetic structure. This study used Hyper-seq gene sequencing technology to develop large-scale genomic SNPs of Manglietia aromatica, both within and outside the tiankengs. Its aim was to investigate the impact of tiankengs on the genetic diversity and genetic structure of the M. aromatica population. The analysis results indicate that the genetic diversity of the populations within the tiankeng (π = 0.2044) is higher than that of the populations outside of it (π = 0.1671), indicating that the tiankengs have a positive impact on species diversity. The genetic differentiation coefficient (FST) between the populations inside and outside the tiankeng was 0.0534 and the FST values of populations within the tiankeng were 0.077, 0.082, and 0.141, meaning that the genetic variation in the tiankengs is very high. The genetic similarity outside the tiankengs is also very high, indicating that the tiankengs are effectively preserving the genetic diversity of M. aromatica. Furthermore, the gene introgression analysis results gave no proof of gene flow between the three tiankeng populations. This suggests that the tiankengs not only protect species diversity, but also hinder gene flow between populations to some extent. However, this hindrance may gradually subside with the evolution of the tiankengs. The genetic structure analysis revealed that the M. aromatica population in Guangxi, China, can be classified into three subpopulations. The first is the tiankeng subpopulation, including all the populations in tiankengs. The second subpopulation consists of populations surrounding the tiankengs. These two subpopulations are distributed in Leye County in northwestern Guangxi, China, and are very close to each other. The third is the Huanjiang subpopulation, which is located far away from the tiankengs. Considering the direction of gene flow and genetic structure, it is speculated that the populations in the tiankengs evolved from the populations near the pit mouth. This study confirms that the tiankengs are shelters and provide a suitable habitat for the endangered plant M. aromatica, because its genetic diversity is well conserved and the species is well adapted to the habitat within the tiankengs. Full article
(This article belongs to the Special Issue Forest Biodiversity Conservation)
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23 pages, 4213 KiB  
Essay
Correlation and Community Stability Analysis of Herbaceous Plants in Dashiwei Tiankeng Group, China
by Ming Chen, Fuyan Mo, Lili Zheng, Guoliang Bin, Ziyu Zou, Peiqi Chen and Yuegui Xue
Forests 2023, 14(6), 1244; https://doi.org/10.3390/f14061244 - 15 Jun 2023
Cited by 6 | Viewed by 2451
Abstract
Studying the interspecific association and stability of herbaceous communities in different developmental stages of tiankeng is helpful to understand the relationship between tiankeng vegetation and the environment, and can provide an important theoretical basis for the protection and restoration of the karst tiankeng [...] Read more.
Studying the interspecific association and stability of herbaceous communities in different developmental stages of tiankeng is helpful to understand the relationship between tiankeng vegetation and the environment, and can provide an important theoretical basis for the protection and restoration of the karst tiankeng ecosystem. In this study, the herbaceous community of the Dashiwei Tiankeng Group in Guangxi was studied to analyze the interspecific relationships and community stability of herbaceous plants in four different habitats (the earlier stage, middle stage, late stage and the external forest of tiankeng), and to explore whether the herbaceous community structure gradually stabilized with the development of tiankeng. The variance ratio (VR), X2 test, association coefficient (JI) and the Spearman rank correlation coefficient test were used to analyze the interspecific association of the main herbaceous plants in different developmental stages of tiankeng. The stability of the herbaceous community was analyzed by the stability measurement method of M. Godron. The results showed that: (1) the logarithm of the middle stage of tiankeng negatively correlated species was the highest (56.7%), and the logarithm of the later stage of tiankeng positively correlated species was the highest (57.2%). The positive and negative correlation ratio of main herbs decreased first and then increased, indicating that the middle stage of development was the period of high competition among herbs and the biggest difference in resource utilization. The ecological habits of herbaceous plants will be changed from sciophiles to hygrophytes to heliophiles and drought-enduring plants. (2) The earlier stage and middle stage of tiankeng overall relevance had a significant negative correlation, the later stage and external forest of tiankeng overall correlation were not significant positive correlation, and the X2 test and the Spearman rank correlation coefficient of different developmental stages of tiankeng most major herbaceous species were not significant correlation, suggesting that the major herbs in tiankengs had weak association and strong independence. (3) The distance from the intersection point to the stable point (20, 80) was 19.799, 17.867, 18.922 and 17.706, respectively, of the four regression models of tiankengs herb community, which further indicated that the forest herb layers were in an unstable state. The forest outside is relatively more stable than the herbaceous community inside the tiankeng. Full article
(This article belongs to the Special Issue Forest Biodiversity and Ecosystem Stability)
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23 pages, 9256 KiB  
Article
Is an Unmanned Aerial Vehicle (UAV) Suitable for Extracting the Stand Parameters of Inaccessible Underground Forests of Karst Tiankeng?
by Wei Shui, Hui Li, Yongyong Zhang, Cong Jiang, Sufeng Zhu, Qianfeng Wang, Yuanmeng Liu, Sili Zong, Yunhui Huang and Meiqi Ma
Remote Sens. 2022, 14(17), 4128; https://doi.org/10.3390/rs14174128 - 23 Aug 2022
Cited by 6 | Viewed by 2365
Abstract
Unmanned aerial vehicle (UAV) remote sensing technology is gradually playing a role alternative to traditional field survey methods in monitoring plant functional traits of forest ecology. Few studies focused on monitoring functional trait ecology of underground forests of inaccessible negative terrain with UAV. [...] Read more.
Unmanned aerial vehicle (UAV) remote sensing technology is gradually playing a role alternative to traditional field survey methods in monitoring plant functional traits of forest ecology. Few studies focused on monitoring functional trait ecology of underground forests of inaccessible negative terrain with UAV. The underground forests of tiankeng were discovered and are known as the inaccessible precious ecological refugia of extreme negative terrain. The aim of this research proposal is to explore the suitability of UAV technology for extracting the stand parameters of underground forests’ functional traits in karst tiankeng. Based on the multi-scale segmentation algorithm and object-oriented classification method, the canopy parameters (crown width and densities) of underground forests in degraded karst tiankeng were extracted by UAV remote sensing image data and appropriate features collection. First, a multi-scale segmentation algorithm was applied to attain the optimal segmentation scale to obtain the single wood canopy. Second, feature space optimization was used to construct the optimal feature space set for the image and then the k-nearest neighbor(k-NN) classifier was used to classify the image features. The features were classified into five types: canopy, grassland, road, gap, and bare land. Finally, both the crown densities and average crown width of the trees were calculated, and their accuracy were verified. The results showed that overall accuracy of object-oriented image feature classification was 85.60%, with 0.72 of kappa coefficient. The accuracy of tree canopy density extraction was 82.34%, for which kappa coefficient reached 0.91. The average canopy width of trees in the samples from the tiankeng-inside was 5.38 m, while that of the outside samples was 4.83 m. In conclusion, the canopy parameters in karst tiankeng were higher than those outside the tiankeng. Stand parameters extraction of karst tiankeng underground forests based on UAV remote sensing was relatively satisfactory. Thus, UAV technology provides a new approach to explore forest resources in inaccessible negative terrain such as karst tiankengs. In the future, we need to consider UAVs with more bands of cameras to extract more plant functional traits to promote the application of UAV for underground forest ecology research of more inaccessible negative terrain. Full article
(This article belongs to the Special Issue Trends in UAV Remote Sensing Applications: Part II)
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13 pages, 3313 KiB  
Article
Species Abundance Distributions Patterns between Tiankeng Forests and Nearby Non-Tiankeng Forests in Southwest China
by Linjuan Huang, Hao Yang, Xiaofei An, Yanmei Yu, Linlan Yu, Gui Huang, Xinyu Liu, Ming Chen and Yuegui Xue
Diversity 2022, 14(2), 64; https://doi.org/10.3390/d14020064 - 19 Jan 2022
Cited by 12 | Viewed by 3546
Abstract
Identifying the species abundance distributions (SADs) in Tiankeng forests is crucial for restoring and managing degraded karst ecosystem, whereas previous studies rarely explored the differences and response of vegetation dynamics to environmental variations. The species composition and SADs of the inner and outer [...] Read more.
Identifying the species abundance distributions (SADs) in Tiankeng forests is crucial for restoring and managing degraded karst ecosystem, whereas previous studies rarely explored the differences and response of vegetation dynamics to environmental variations. The species composition and SADs of the inner and outer fringe areas of Tiankeng forest and nearby non-Tiankeng forest were compared in Southwest China. Six models were adopted to compare SADs of three habitats. Kolmogrov–Smirnov (K–S) test was selected to compare the discrepancy between the simulated and observed SAD patterns. The Akaike Information Criterion (AIC) test was adopted to compare the models, and the best model was indicated by the lowest AIC value. The results showed that (1) the species dispersal from the inside of Tiankeng forests to the nearby non-Tiankeng forests is limited, while species have unlimited dispersal from nearby non-Tiankeng forests to the inside of Tiankeng forests via the fringe of Tiankeng forests. (2) Species abundance, species rarity, richness, and species accumulation rate in the Tiankeng forests were significant in non-Tiankeng forests (p < 0.05), and most species in inner Tiankeng forests originated from nearby non-Tiankeng forests. (3) Based on the criterion of K-S values, all models have passed the K–S test (p > 0.05), which indicated that niche processes and neutral process worked together in the maintenance of community species diversity, the community in study area is a niche-neutral continuum. (4) Considered the lowest AIC value, the neutral (△mean AIC = 1.3) models performed better than the niche (△mean AIC = 22.7) models and statistical (△mean AIC = 2.7) in the Tiankeng forest, while the statistical models performed better than the niche and neutral models in the non-Tiankeng forests. The results suggested that the main driving force of Tiankeng forests is the neutral process. The negative terrain in Tiankeng restricted the species dispersal due to topographic constraints. However, the species dispersal from the nearby non-Tiankeng forests could promote the species succession in the inner Tiankeng. Therefore, we propose that nearby non-Tiankeng forests should be emphasized for protecting the biodiversity of Tiankeng forests. Full article
(This article belongs to the Special Issue Ecology, Evolution and Diversity of Plants)
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17 pages, 2666 KiB  
Article
Characteristics of the Soil Microbial Communities in Different Slope Positions along an Inverted Stone Slope in a Degraded Karst Tiankeng
by Cong Jiang, Jie Feng, Su-Feng Zhu and Wei Shui
Biology 2021, 10(6), 474; https://doi.org/10.3390/biology10060474 - 27 May 2021
Cited by 17 | Viewed by 3094
Abstract
The underground forests developed on inverted stone slopes in degraded karst tiankengs are important areas for biodiversity conservation, but the microbial community profiles have not been sufficiently characterized. Thus, we investigated the soil microbial communities at four sites (at the bottom of the [...] Read more.
The underground forests developed on inverted stone slopes in degraded karst tiankengs are important areas for biodiversity conservation, but the microbial community profiles have not been sufficiently characterized. Thus, we investigated the soil microbial communities at four sites (at the bottom of the slope (BS), in the middle of the slope (MS), in the upper part of the slope (US) and outside the tiankeng (OT)) in the Shenxiantang tiankeng. The dominant phyla in the inverted stone slope were Proteobacteria, Actinobacteria, and Acidobacteria, and the relative abundance were different in different slope positions. The Shannon–Wiener diversity index of the microbial community was significantly greater for the US site than for the MS or BS sites. The metabolism functional pathways (including C/N cycle) were more abundant at the BS site. Total nitrogen and pH were the dominant factors in determining the distribution of the microbial community along an inverted stone slope. These results suggest that topographic heterogeneity can influence the variations in the soil microbial structure, diversity, and function in degraded karst tiankengs and emphasized the ecological value of inverted stone slopes within karst tiankengs. Full article
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18 pages, 4384 KiB  
Article
Profiling the Bacterial Diversity in a Typical Karst Tiankeng of China
by Gaozhong Pu, Yanna Lv, Lina Dong, Longwu Zhou, Kechao Huang, Danjuan Zeng, Ling Mo and Guangping Xu
Biomolecules 2019, 9(5), 187; https://doi.org/10.3390/biom9050187 - 14 May 2019
Cited by 22 | Viewed by 6259
Abstract
While karst tiankengs have a higher capacity to act as safe havens for biodiversity in changing climates, little is known about their soil microorganisms. To fill this gap, we investigate the distribution and driving factors of the bacterial community in karst tiankeng systems. [...] Read more.
While karst tiankengs have a higher capacity to act as safe havens for biodiversity in changing climates, little is known about their soil microorganisms. To fill this gap, we investigate the distribution and driving factors of the bacterial community in karst tiankeng systems. There is a significant difference in the soil characteristics between the inside and the outside of a karst tiankeng. At the karst tiankeng considered in this study, the bacterial composition, in terms of the operational taxonomic unit (OTU), was found to be significantly different in different soil samples, taken from diverse sampling sites within the collapsed doline or the external area, and showed a high habitat heterogeneity. The dominant phylum abundances vary with the sampling sites and have their own indicator taxa from phylum to genus. Unlike the primary controlling factors of plant diversity, the microclimate (soil moisture and temperature), soil pH, and slope dominated the distribution of the bacterial community in karst tiankeng systems. Our results firstly showed the distribution characteristics of bacterial communities and then revealed the importance of microhabitats in predicting the microbial distribution in karst tiankeng systems. Full article
(This article belongs to the Special Issue Biology, Biotechnology and Bioprospecting of Microbial Biomolecules)
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