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Keywords = fluorescence decays from dimer states

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22 pages, 4619 KB  
Article
Contribution of Protonation to the Dielectric Relaxation Arising from Bacteriopheophytin Reductions in the Photosynthetic Reaction Centers of Rhodobacter sphaeroides
by Gábor Sipka and Péter Maróti
Biomolecules 2024, 14(11), 1367; https://doi.org/10.3390/biom14111367 - 27 Oct 2024
Viewed by 1251
Abstract
The pH dependence of the free energy level of the flash-induced primary charge pair P+IA was determined by a combination of the results from the indirect charge recombination of P+QA and from the delayed fluorescence [...] Read more.
The pH dependence of the free energy level of the flash-induced primary charge pair P+IA was determined by a combination of the results from the indirect charge recombination of P+QA and from the delayed fluorescence of the excited dimer (P*) in the reaction center of the photosynthetic bacterium Rhodobacter sphaeroides, where the native ubiquinone at the primary quinone binding site QA was replaced by low-potential anthraquinone (AQ) derivatives. The following observations were made: (1) The free energy state of P+IA was pH independent below pH 10 (–370 ± 10 meV relative to that of the excited dimer P*) and showed a remarkable decrease (about 20 meV/pH unit) above pH 10. A part of the dielectric relaxation of the P+IA charge pair that is not insignificant (about 120 meV) should come from protonation-related changes. (2) The single exponential decay character of the kinetics proves that the protonated/unprotonated P+IA and P+QA states are in equilibria and the rate constants of protonation konH +koffH are much larger than those of the charge back reaction kback ~103 s−1. (3) Highly similar pH profiles were measured to determine the free energy states of P+QA and P+IA, indicating that the same acidic cluster at around QB should respond to both anionic species. This was supported by model calculations based on anticooperative proton distribution in the cluster with key residues of GluL212, AspL213, AspM17, and GluH173, and the effect of the polarization of the aqueous phase on electrostatic interactions. The larger distance of IA from the cluster (25.2 Å) compared to that of QA (14.5 Å) is compensated by a smaller effective dielectric constant (6.5 ± 0.5 and 10.0 ± 0.5, respectively). (4) The P* → P+QA and IAQA → IAQA electron transfers are enthalpy-driven reactions with the exemption of very large (>60%) or negligible entropic contributions in cases of substitution by 2,3-dimethyl-AQ or 1-chloro-AQ, respectively. The possible structural consequences are discussed. Full article
(This article belongs to the Special Issue New Insights into the Membranes of Anoxygenic Phototrophic Bacteria)
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18 pages, 2670 KB  
Article
Symmetry Breaking Charge Transfer in DNA-Templated Perylene Dimer Aggregates
by Katelyn M. Duncan, Donald L. Kellis, Jonathan S. Huff, Matthew S. Barclay, Jeunghoon Lee, Daniel B. Turner, Paul H. Davis, Bernard Yurke, William B. Knowlton and Ryan D. Pensack
Molecules 2022, 27(19), 6612; https://doi.org/10.3390/molecules27196612 - 5 Oct 2022
Cited by 8 | Viewed by 3274
Abstract
Molecular aggregates are of interest to a broad range of fields including light harvesting, organic optoelectronics, and nanoscale computing. In molecular aggregates, nonradiative decay pathways may emerge that were not present in the constituent molecules. Such nonradiative decay pathways may include singlet fission, [...] Read more.
Molecular aggregates are of interest to a broad range of fields including light harvesting, organic optoelectronics, and nanoscale computing. In molecular aggregates, nonradiative decay pathways may emerge that were not present in the constituent molecules. Such nonradiative decay pathways may include singlet fission, excimer relaxation, and symmetry-breaking charge transfer. Singlet fission, sometimes referred to as excitation multiplication, is of great interest to the fields of energy conversion and quantum information. For example, endothermic singlet fission, which avoids energy loss, has been observed in covalently bound, linear perylene trimers and tetramers. In this work, the electronic structure and excited-state dynamics of dimers of a perylene derivative templated using DNA were investigated. Specifically, DNA Holliday junctions were used to template the aggregation of two perylene molecules covalently linked to a modified uracil nucleobase through an ethynyl group. The perylenes were templated in the form of monomer, transverse dimer, and adjacent dimer configurations. The electronic structure of the perylene monomers and dimers were characterized via steady-state absorption and fluorescence spectroscopy. Initial insights into their excited-state dynamics were gleaned from relative fluorescence intensity measurements, which indicated that a new nonradiative decay pathway emerges in the dimers. Femtosecond visible transient absorption spectroscopy was subsequently used to elucidate the excited-state dynamics. A new excited-state absorption feature grows in on the tens of picosecond timescale in the dimers, which is attributed to the formation of perylene anions and cations resulting from symmetry-breaking charge transfer. Given the close proximity required for symmetry-breaking charge transfer, the results shed promising light on the prospect of singlet fission in DNA-templated molecular aggregates. Full article
(This article belongs to the Special Issue Excitons in Molecular Aggregates)
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19 pages, 4312 KB  
Article
Effect of Dimer Structure and Inhomogeneous Broadening of Energy Levels on the Action of Flavomononucleotide in Rigid Polyvinyl Alcohol Films
by Hanna Grajek, Jacek Kubicki, Ignacy Gryczyński, Jerzy Karolczak, Grażyna Żurkowska, Agnieszka I. Piotrowicz-Cieślak and Piotr Bojarski
Int. J. Mol. Sci. 2021, 22(14), 7759; https://doi.org/10.3390/ijms22147759 - 20 Jul 2021
Cited by 1 | Viewed by 3199
Abstract
The results of time-resolved fluorescence measurements of flavin mononucleotide (FMN) in rigid polyvinyl alcohol films (PVA) demonstrate that fluorescence intensity decays are strongly accelerated in the presence of fluorescent dimers and nonradiative energy transfer processes. The fluorescence decay originating both from H and [...] Read more.
The results of time-resolved fluorescence measurements of flavin mononucleotide (FMN) in rigid polyvinyl alcohol films (PVA) demonstrate that fluorescence intensity decays are strongly accelerated in the presence of fluorescent dimers and nonradiative energy transfer processes. The fluorescence decay originating both from H and J dimer states of FMN was experimentally observed for the first time. The mean fluorescence lifetimes for FMN dimers were obtained: τfl = 2.66 ns (at λexc = 445 nm) and τfl = 2.02 (at λexc = 487 nm) at λobs = 600 nm and T = 253 K from H and J state of dimers, respectively. We show that inhomogeneous orientational broadening of energy levels (IOBEL) affects the shape of the fluorescence decay and leads to the dependence of the average monomer fluorescence lifetime on excitation wavelength. IOBEL affected the nonradiative energy transfer and indicated that different flavin positioning in the protein pocket could (1) change the spectroscopic properties of flavins due to the existence of “blue” and “red” fluorescence centers, and (2) diminish the effectiveness of energy transfer between FMN molecules. Full article
(This article belongs to the Collection Feature Papers in Molecular Biophysics)
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22 pages, 3181 KB  
Article
P∩N Bridged Cu(I) Dimers Featuring Both TADF and Phosphorescence. From Overview towards Detailed Case Study of the Excited Singlet and Triplet States
by Thomas Hofbeck, Thomas A. Niehaus, Michel Fleck, Uwe Monkowius and Hartmut Yersin
Molecules 2021, 26(11), 3415; https://doi.org/10.3390/molecules26113415 - 4 Jun 2021
Cited by 20 | Viewed by 4274
Abstract
We present an overview over eight brightly luminescent Cu(I) dimers of the type Cu2X2(P∩N)3 with X = Cl, Br, I and P∩N = 2-diphenylphosphino-pyridine (Ph2Ppy), 2-diphenylphosphino-pyrimidine (Ph2Ppym), 1-diphenylphosphino-isoquinoline (Ph2Piqn) including three new [...] Read more.
We present an overview over eight brightly luminescent Cu(I) dimers of the type Cu2X2(P∩N)3 with X = Cl, Br, I and P∩N = 2-diphenylphosphino-pyridine (Ph2Ppy), 2-diphenylphosphino-pyrimidine (Ph2Ppym), 1-diphenylphosphino-isoquinoline (Ph2Piqn) including three new crystal structures (Cu2Br2(Ph2Ppy)3 1-Br, Cu2I2(Ph2Ppym)3 2-I and Cu2I2(Ph2Piqn)3 3-I). However, we mainly focus on their photo-luminescence properties. All compounds exhibit combined thermally activated delayed fluorescence (TADF) and phosphorescence at ambient temperature. Emission color, decay time and quantum yield vary over large ranges. For deeper characterization, we select Cu2I2(Ph2Ppy)3, 1-I, showing a quantum yield of 81%. DFT and SOC-TDDFT calculations provide insight into the electronic structures of the singlet S1 and triplet T1 states. Both stem from metal+iodide-to-ligand charge transfer transitions. Evaluation of the emission decay dynamics, measured from 1.2 ≤ T ≤ 300 K, gives ∆E(S1-T1) = 380 cm−1 (47 meV), a transition rate of k(S1→S0) = 2.25 × 106 s−1 (445 ns), T1 zero-field splittings, transition rates from the triplet substates and spin-lattice relaxation times. We also discuss the interplay of S1-TADF and T1-phosphorescence. The combined emission paths shorten the overall decay time. For OLED applications, utilization of both singlet and triplet harvesting can be highly favorable for improvement of the device performance. Full article
(This article belongs to the Special Issue 25th Anniversary of Molecules—Recent Advances in Applied Chemistry)
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19 pages, 2914 KB  
Article
Spectroscopic Studies of a Phosphonium Ionic Liquid in Supercritical CO2
by Mark P. Heitz, Zackary C. Putney and Joel Campaign
ChemEngineering 2020, 4(2), 20; https://doi.org/10.3390/chemengineering4020020 - 27 Mar 2020
Cited by 1 | Viewed by 3605
Abstract
Fluorescence spectroscopy was used to study a solution comprised of coumarin 153 (C153)+ trihexyltetradecylphosphonium bis(trifluoromethylsulfonyl)imide ([P6,6,6,14]+ [Tf2N])+ supercritical CO2 (scCO2). We compare the spectroscopy of C153 in neat scCO2 to that of [...] Read more.
Fluorescence spectroscopy was used to study a solution comprised of coumarin 153 (C153)+ trihexyltetradecylphosphonium bis(trifluoromethylsulfonyl)imide ([P6,6,6,14]+ [Tf2N])+ supercritical CO2 (scCO2). We compare the spectroscopy of C153 in neat scCO2 to that of C153/scCO2 with the addition of ionic liquid (IL). Excitation and emission peak frequencies of C153 in scCO2 and in IL/scCO2 diverged at reduced densities (ρr = ρ/ρc) below the CO2 critical density. At low fluid density, spectral changes in the IL/scCO2 solutions showed evidence that C153 experiences a very different microenvironment—one that is unlike neat scCO2. The data show that the presence of IL clearly influences the C153 excitation and emission profiles. Excitation was broadened and red shifted by >2000 cm−1 and the presence of an additional low-energy emission component that was red shifted by ~3000 cm−1 was clearly visible and not observed in neat scCO2. The solution heterogeneity was controlled by changing the scCO2 density and at high fluid density, both the excitation and emission spectra were more similar to those in neat scCO2. Steady-state anisotropy also showed that at low fluid density, the C153 emission was significantly polarized. Aggregation of C153 has been reported in the literature and this led us to hypothesize the possibility that C153 dimer (aggregation) formation may be occurring in scCO2. Another possible explanation is that dye–IL aggregates may dissolve into the scCO2 phase due to C153 acting as a “co-solvent” for the IL. Time-resolved intensity decay measurements yielded only slightly non-exponential decays with accompanying time constants of ~3–4 ns that were significantly shorter than the 5–6 ns time constants in neat scCO2, which are suggestive of C153–IL interactions. However, these data did not conclusively support dimer formation. Pre-exponential factors of the time constants showed that almost all of the emission was due to monomeric C153. Full article
(This article belongs to the Special Issue Advanced Ionic Liquid-Based Mixed Solvent Systems)
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17 pages, 1951 KB  
Article
Dissolution of Trihexyltetradecylphosphonium Chloride in Supercritical CO2
by Mark P. Heitz, Kristina L. Fuller and Kaitlin A. Ordiway
ChemEngineering 2017, 1(2), 12; https://doi.org/10.3390/chemengineering1020012 - 3 Nov 2017
Cited by 1 | Viewed by 6276
Abstract
We present steady-state and time-resolved fluorescence spectroscopic data derived from coumarin 153 (C153) in a binary solution comprised of trihexyltetradecylphosphonium chloride ([P6,6,6,14]+Cl) and supercritical CO2 (scCO2). Steady-state fluorescence of C153 was measured in neat [...] Read more.
We present steady-state and time-resolved fluorescence spectroscopic data derived from coumarin 153 (C153) in a binary solution comprised of trihexyltetradecylphosphonium chloride ([P6,6,6,14]+Cl) and supercritical CO2 (scCO2). Steady-state fluorescence of C153 was measured in neat scCO2 and ionic liquid (IL)-modified scCO2 solutions. The steady-state excitation and emission peak frequency data in neat scCO2 and IL/scCO2 diverge at low fluid density (ρr = ρ/ρc < 1). The prominent spectral differences at low fluid density provided clear evidence that C153 reports different microenvironments, and suggested that the IL is solubilized in the bulk scCO2 and heterogeneity of the C153 microenvironment is readily controlled by scCO2 density. C153 dimers have been reported in the literature, and this formed the basis of the hypothesis that dimerization is occurring in scCO2. Time-dependent density functional theory (TD-DFT) electronic structure calculations yielded transition energies that were consistent with excitation spectra and provided supporting evidence for the dimer hypothesis. Time-resolved fluorescence measurements yielded triple exponential decays with time constants that further supported dimer formation. The associated fractional contributions showed that the dominant contribution to the intensity decay was from C153 monomers, and that in high density scCO2 there was minimal contribution from C153 dimers. Full article
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