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Keywords = ectopic flower formation

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19 pages, 47146 KB  
Article
Functional Conservation and Redundancy of Duplicated AGAMOUS Homologs in Regulating Floral Organ Development of Tagetes erecta
by Chunling Zhang, Chujun Huang, Ke Zhu, Hang Li, Shiyu Xu, Zhengguo Tao and Yanhong He
Agronomy 2025, 15(10), 2379; https://doi.org/10.3390/agronomy15102379 - 12 Oct 2025
Cited by 3 | Viewed by 734
Abstract
Asteraceae, as the largest angiosperm family, has an architecturally complex capitulum (inflorescences) composed of heteromorphic florets with distinct morphologies and functions. AGAMOUS (AG) MADS-box transcription factors act as key regulators in flower development and are essential for the formation of the characteristic capitulum [...] Read more.
Asteraceae, as the largest angiosperm family, has an architecturally complex capitulum (inflorescences) composed of heteromorphic florets with distinct morphologies and functions. AGAMOUS (AG) MADS-box transcription factors act as key regulators in flower development and are essential for the formation of the characteristic capitulum and florets. To explore the potential functions of the AG genes in Asteraceae, we conducted a genome-wide identification and analysis of 52 AG-like genes across 22 species within this family. Additionally, we studied the functions of the Tagetes erecta class C genes TeAG1 and TeAG2 by introducing these genes into T. erecta and Nicotiana tabacum. Gene structure and phylogenomic analyses indicated that AG-like genes may have conserved and specific biological functions in Asteraceae plants. Phenotypic analyses revealed that the T. erecta class C genes TeAG1 and TeAG2 played a conserved and redundant role in regulating stamen and carpel development. The simultaneous downregulation of TeAG1 and TeAG2 led to the homeotic transformation of both stamens and carpels into corolla-like structures. However, silencing TeAG1 or TeAG2 individually in T. erecta did not affect any floral organ development. Furthermore, the ectopic expression of TeAG1 and TeAG2 in N. tabacum resulted in the transformation of sepals into pistils and corollas into stamens, respectively. Additionally, qRT-PCR analyses revealed that TeAG1 and TeAG2 repressed the expression of class A genes. Our findings expand our understanding of the function of class C genes within Asteraceae and provide strategies for breeding double-flower cultivars. Full article
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20 pages, 16578 KB  
Article
Characterization of MADS-Box Gene Family in Isatis indigotica and Functional Study of IiAP1 in Regulating Floral Transition and Formation
by Yanqin Ma, Yanhong Lan, Ju Li, Haicheng Long, Yujie Zhou, Zhi Li, Mingjun Miao, Jian Zhong, Haie Wang, Wei Chang, Ziqin Xu and Liang Yang
Plants 2025, 14(1), 129; https://doi.org/10.3390/plants14010129 - 4 Jan 2025
Cited by 2 | Viewed by 1638
Abstract
In flowering plants, MADS-box genes play regulatory roles in flower induction, floral initiation, and floral morphogenesis. Isatis indigotica (I. indigotica) is a traditional Chinese medicinal plant. However, available information concerning MADS-box genes in I. indigotica is insufficient. Based on [...] Read more.
In flowering plants, MADS-box genes play regulatory roles in flower induction, floral initiation, and floral morphogenesis. Isatis indigotica (I. indigotica) is a traditional Chinese medicinal plant. However, available information concerning MADS-box genes in I. indigotica is insufficient. Based on the sequencing data of the I. indigotica transcriptome, we identified MADS-box gene-encoding transcription factors that have been shown to play critical roles in developmental processes. In this study, 102 I. indigotica MADS-box genes were identified and categorized into type I (Mα, Mβ, and Mγ) and type II (MIKCC and MIKC*) subfamilies. IiMADS proteins in the same cluster had similar motifs and gene structures. In total, 102 IiMADS-box genes were unevenly distributed across seven chromosomes. APETALA1 (AP1) encodes a MADS-box transcription factor which plays a pivotal role in determining floral meristem identity and also modulates developmental processes within the perianth. We then selected IiAP1 for functional studies and found that it is localized to the nucleus and highly expressed in inflorescence, sepals, and petals. The ectopic expression of IiAP1 in Arabidopsis resulted in early flowering and abnormal development of floral organs. Taken together, this research study carried out a systematic identification of MADS-box genes in I. indigotica and demonstrated that IiAP1 takes part in the regulation of floral transition and formation. Full article
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12 pages, 5545 KB  
Article
Cloning, Identification, and Functional Analysis of the Chalcone Isomerase Gene from Astragalus sinicus
by Xian Zhang, Jing Xu, Linlin Si, Kai Cao, Yuge Wang, Hua Li and Jianhong Wang
Genes 2023, 14(7), 1400; https://doi.org/10.3390/genes14071400 - 5 Jul 2023
Cited by 4 | Viewed by 2325
Abstract
Astragalus sinicus is an important winter-growing cover crop. It is widely utilized, not only as a cover crop for its benefits in fertilizing the soil but also as a landscape ground cover plant. Anthocyanins are involved in the pigmentation of plants in leaves [...] Read more.
Astragalus sinicus is an important winter-growing cover crop. It is widely utilized, not only as a cover crop for its benefits in fertilizing the soil but also as a landscape ground cover plant. Anthocyanins are involved in the pigmentation of plants in leaves and flowers, which is a crucial characteristic trait for A. sinicus. The formation of anthocyanins depends significantly on the enzyme chalcone isomerase (CHI). However, research on the CHI gene of A. sinicus remains unexplored. The rapid amplification of cDNA ends (RACE) approach was used in this research to clone the CHI sequence from A. sinicus (AsiCHI). The expression profiles of the AsiCHI gene in multiple tissues of A. sinicus were subsequently examined by qRT-PCR (Quantitative Real-Time PCR). Furthermore, the function of the AsiCHI was identified by the performance of ectopic expression in Arabidopsis (Arabidopsis thaliana). The outcomes revealed that the full-length cDNA of the AsiCHI gene (GeneBank: OQ870547) measured 972 bp in length and included an open reading frame of 660 bp. The encoded protein contains 219 amino acids with a molecular weight of 24.14 kDa and a theoretical isoelectric point of 5.11. In addition, the remarkable similarity between the AsiCHI protein and the CHI proteins of other Astragalus species was demonstrated by the sequence alignment and phylogenetic analysis. Moreover, the highest expression level of AsiCHI was observed in leaves and showed a positive correlation with anthocyanin content. The functional analysis further revealed that the overexpression of AsiCHI enhanced the anthocyanidin accumulation in the transgenic lines. This study provided a better understanding of AsiCHI and elucidated its role in anthocyanin production. Full article
(This article belongs to the Special Issue Application of Bioinformatics in Plants and Animals)
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11 pages, 5095 KB  
Article
Overexpression of Liriodenron WOX5 in Arabidopsis Leads to Ectopic Flower Formation and Altered Root Morphology
by Dandan Wang, Xiaoxiao Ma, Zhaodong Hao, Xiaofei Long, Jisen Shi and Jinhui Chen
Int. J. Mol. Sci. 2023, 24(2), 906; https://doi.org/10.3390/ijms24020906 - 4 Jan 2023
Cited by 13 | Viewed by 3798
Abstract
Roots are essential for plant growth, and studies on root-related genes, exemplified by WUSCHEL-RELATED HOMEOBOX5 (WOX5), have mainly concentrated on model organisms with less emphasis on the function of these genes in woody plants. Here, we report that overexpression of the [...] Read more.
Roots are essential for plant growth, and studies on root-related genes, exemplified by WUSCHEL-RELATED HOMEOBOX5 (WOX5), have mainly concentrated on model organisms with less emphasis on the function of these genes in woody plants. Here, we report that overexpression of the WOX5 gene from Liriodendron hybrid (LhWOX5) in Arabidopsis leads to significant morphological changes in both the aerial and subterranean organs. In the Arabidopsis aerial parts, overexpression of LhWOX5 results in the production of ectopic floral meristems and leaves, possibly via the ectopic activation of CLV3 and LFY. In addition, in the Arabidopsis root, overexpression of LhWOX5 alters root apical meristem morphology, leading to a curled and shortened primary root. Importantly, these abnormal phenotypes in the aerial and subterranean organs caused by constitutive ectopic expression of LhWOX5 mimic the observed phenotypes when overexpressing AtWUS and AtWOX5 in Arabidopsis, respectively. Taken together, we propose that the LhWOX5 gene, originating from the Magnoliaceae plant Liriodendron, is a functional homolog of the AtWUS gene from Arabidopsis, while showing the highest degree of sequence similarity with its ortholog, AtWOX5. Our study provides insight into the potential role of LhWOX5 in the development of both the shoot and root. Full article
(This article belongs to the Section Molecular Plant Sciences)
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19 pages, 3763 KB  
Article
Functional Divergence Analysis of AGL6 Genes in Prunus mume
by Lei Wang, Jinhai Song, Xu Han, Yunyan Yu, Qikui Wu, Shuai Qi and Zongda Xu
Plants 2023, 12(1), 158; https://doi.org/10.3390/plants12010158 - 29 Dec 2022
Cited by 6 | Viewed by 2811
Abstract
The AGAMOUS-LIKE6 (AGL6) lineage is an important clade of MADS-box transcription factors that play essential roles in floral organ development. The genome of Prunus mume contains two homoeologous AGL6 genes that are replicated as gene fragments. In this study, two AGL6 homologs, PmAGL6-1 [...] Read more.
The AGAMOUS-LIKE6 (AGL6) lineage is an important clade of MADS-box transcription factors that play essential roles in floral organ development. The genome of Prunus mume contains two homoeologous AGL6 genes that are replicated as gene fragments. In this study, two AGL6 homologs, PmAGL6-1 and PmAGL6-2, were cloned from P. mume and then functionally characterized. Sequence alignment and phylogenetic analyses grouped both genes into the AGL6 lineage. The expression patterns and protein–protein interaction patterns showed significant differences between the two genes. However, the ectopic expression of the two genes in Arabidopsis thaliana resulted in similar phenotypes, including the promotion of flowering, alteration of floral organ structure, participation in the formation of the floral meristem and promotion of pod bending. Therefore, gene duplication has led to some functional divergence of PmAGL6-1 and PmAGL6-2 but their functions are similar. We thus speculated that AGL6 genes play a crucial role in flower development in P. mume. Full article
(This article belongs to the Special Issue Advancement of Ornamental Flowering Plants)
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18 pages, 3724 KB  
Article
Arabidopsis thaliana SHOOT MERISTEMLESS Substitutes for Medicago truncatula SINGLE LEAFLET1 to Form Complex Leaves and Petals
by Véronique Pautot, Ana Berbel, Thibaud Cayla, Alexis Eschstruth, Bernard Adroher, Pascal Ratet, Francisco Madueño and Patrick Laufs
Int. J. Mol. Sci. 2022, 23(22), 14114; https://doi.org/10.3390/ijms232214114 - 15 Nov 2022
Cited by 5 | Viewed by 2995
Abstract
LEAFY plant-specific transcription factors, which are key regulators of flower meristem identity and floral patterning, also contribute to meristem activity. Notably, in some legumes, LFY orthologs such as Medicago truncatula SINGLE LEAFLET (SGL1) are essential in maintaining an undifferentiated and proliferating fate [...] Read more.
LEAFY plant-specific transcription factors, which are key regulators of flower meristem identity and floral patterning, also contribute to meristem activity. Notably, in some legumes, LFY orthologs such as Medicago truncatula SINGLE LEAFLET (SGL1) are essential in maintaining an undifferentiated and proliferating fate required for leaflet formation. This function contrasts with most other species, in which leaf dissection depends on the reactivation of KNOTTED-like class I homeobox genes (KNOXI). KNOXI and SGL1 genes appear to induce leaf complexity through conserved downstream genes such as the meristematic and boundary CUP-SHAPED COTYLEDON genes. Here, we compare in M. truncatula the function of SGL1 with that of the Arabidopsis thaliana KNOXI gene, SHOOT MERISTEMLESS (AtSTM). Our data show that AtSTM can substitute for SGL1 to form complex leaves when ectopically expressed in M. truncatula. The shared function between AtSTM and SGL1 extended to the major contribution of SGL1 during floral development as ectopic AtSTM expression could promote floral organ identity gene expression in sgl1 flowers and restore sepal shape and petal formation. Together, our work reveals a function for AtSTM in floral organ identity and a higher level of interchangeability between meristematic and floral identity functions for the AtSTM and SGL1 transcription factors than previously thought. Full article
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18 pages, 3243 KB  
Article
Overexpression of Liriodendron tulipifera JAG Gene (LtuJAG) Changes Leaf Shapes in Transgenic Arabidopsis thaliana
by Lingmin Wei, Shaoying Wen, Zhonghua Tu, Yanqing Zhao and Huogen Li
Int. J. Mol. Sci. 2022, 23(3), 1322; https://doi.org/10.3390/ijms23031322 - 25 Jan 2022
Cited by 7 | Viewed by 3625
Abstract
In Arabidopsis thaliana, JAGGED (JAG) is a transcription inhibitor that controls the development of leaf polarity and regulates the expression of genes controlling lateral organ formation. Liriodendron tulipifera is an ornamental tree with extraordinary tulip-shaped flowers and goose web-like leaves, [...] Read more.
In Arabidopsis thaliana, JAGGED (JAG) is a transcription inhibitor that controls the development of leaf polarity and regulates the expression of genes controlling lateral organ formation. Liriodendron tulipifera is an ornamental tree with extraordinary tulip-shaped flowers and goose web-like leaves, this is one of the suitable plants for morphological development research. To investigate the potential functions of the LtuJAG gene, we isolated the full-length LtuJAG from L. tulipifera, transferred it into A. thaliana via agrobacterium-mediated transformation, and monitored its expression pattern. Subcellular localization showed that LtuJAG was located in the nucleus. RT-qPCR assays indicated that LtuJAG was expressed mainly in leaf buds and flowers, but not in mature leaves and stems. GUS staining results showed that LtuJAG was expressed in the shoot apical meristem (SAM). Overexpressing LtuJAG changed A. thaliana leaf shapes, causing a moderate serration and a slight asymmetric distribution in the medio-lateral and proximal-distal axes. Ectopic expression of LtuJAG induced the expression of lateral organ boundary suppressors JAGGED LATERAL ORGANS (JLO) and ARABIDOPSIS THALIANA HOMEOBOX1 (ATH1). It also repressed the expression of the apical meristem suppressor class-1 KNOX gene (KNOX I) and altered endogenous hormone levels. Our results suggest that LtuJAG plays a role in negatively regulating leaf polarity formation in L. tulipifera. Full article
(This article belongs to the Collection Genetics and Molecular Breeding in Plants)
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19 pages, 3508 KB  
Article
Overexpression of MADS-box Gene AGAMOUS-LIKE 12 Activates Root Development in Juglans sp. and Arabidopsis thaliana
by Grégory Montiel, Muriel Gaudet, Françoise Laurans, Philippe Rozenberg, Matthieu Simon, Pascal Gantet, Christian Jay-Allemand and Christian Breton
Plants 2020, 9(4), 444; https://doi.org/10.3390/plants9040444 - 2 Apr 2020
Cited by 12 | Viewed by 3960
Abstract
Until recently, the roles of plant MADS-box genes have mainly been characterized during inflorescence and flower differentiation. In order to precise the roles of AGAMOUS-LIKE 12, one of the few MADS-box genes preferentially expressed in roots, we placed its cDNA under the [...] Read more.
Until recently, the roles of plant MADS-box genes have mainly been characterized during inflorescence and flower differentiation. In order to precise the roles of AGAMOUS-LIKE 12, one of the few MADS-box genes preferentially expressed in roots, we placed its cDNA under the control of the double 35S CaMV promoter to produce transgenic walnut tree and Arabidopsis plants. In Juglans sp., transgenic somatic embryos showed significantly higher germination rates but abnormal development of their shoot apex prevented their conversion into plants. In addition, a wide range of developmental abnormalities corresponding to ectopic root-like structures affected the transgenic lines suggesting partial reorientations of the embryonic program toward root differentiation. In Arabidopsis, AtAGL12 overexpression lead to the production of faster growing plants presenting dramatically wider and shorter root phenotypes linked to increased meristematic cell numbers within the root apex. In the upper part of the roots, abnormal cell divisions patterns within the pericycle layer generated large ectopic cell masses that did not prevent plants to grow. Taken together, our results confirm in both species that AGL12 positively regulates root meristem cell division and promotes overall root vascular tissue formation. Genetic engineering of AGL12 expression levels could be useful to modulate root architecture and development. Full article
(This article belongs to the Special Issue Root Development)
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