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Keywords = drought-driven recruitment

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22 pages, 2870 KB  
Article
Nature Already Did the Screening: Drought-Driven Rhizosphere Recruitment Enables Inoculant Discovery in Tomato and Reveals a Candidate Novel Paracoccus Species
by Kusum Niraula, Maria Leonor Costa, Lilas Wolff, Henrique Cabral, Millia McQuade, Lucas Amoroso Lopes de Carvalho, Daniel Silva, André Sousa and Juan Ignacio Vilchez
Microorganisms 2026, 14(4), 747; https://doi.org/10.3390/microorganisms14040747 - 26 Mar 2026
Viewed by 766
Abstract
Drought is a major constraint on crop productivity, and microbial inoculants are increasingly explored to mitigate plant water stress. However, most inoculant discovery pipelines rely on trait-based screening performed outside the ecological context in which beneficial plant-microbe interactions naturally arise. In natural soils, [...] Read more.
Drought is a major constraint on crop productivity, and microbial inoculants are increasingly explored to mitigate plant water stress. However, most inoculant discovery pipelines rely on trait-based screening performed outside the ecological context in which beneficial plant-microbe interactions naturally arise. In natural soils, drought-exposed plants can reshape the rhizosphere environment by altering carbon allocation and root exudation, thereby selectively recruiting microorganisms compatible with water-limited conditions and effectively performing an ecological pre-selection. Here, we captured this process during early seedling establishment and leveraged drought-driven rhizosphere recruitment as a nature-guided strategy to nominate bacterial inoculant candidates. Tomato seedlings were grown in natural agricultural soil microcosms under well-watered and drought-stressed regimes, and cultivable bacteria were comparatively isolated from rhizosphere and bulk soil fractions. Recruitment-prioritized isolates were subsequently characterized through biochemical assays and genome-informed analyses to provide functional and taxonomic context and were evaluated in early inoculation assays under water stress. Drought-recruited isolates displayed distinct plant-associated responses, and genome-scale taxonomy indicated that one drought-associated isolate represents a genomically distinct lineage within the genus Paracoccus. Together, these findings highlight drought-driven rhizosphere recruitment as an ecologically grounded framework for identifying stress-compatible bacterial candidates and uncovering previously undescribed rhizosphere diversity. Full article
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14 pages, 2172 KB  
Article
Demographic Drivers of Population Decline in the Endangered Korean Fir (Abies koreana): Insights from a Bayesian Integral Projection Model
by Jeong-Soo Park, Jaeyeon Lee and Chung-Weon Yun
Plants 2025, 14(23), 3686; https://doi.org/10.3390/plants14233686 - 3 Dec 2025
Viewed by 853
Abstract
Understanding the demographic mechanisms underlying the decline of endangered tree species is essential for developing effective conservation strategies. This study aimed to quantify the population trajectory and its demographic drivers in the Korean fir (Abies koreana), a subalpine conifer endemic to [...] Read more.
Understanding the demographic mechanisms underlying the decline of endangered tree species is essential for developing effective conservation strategies. This study aimed to quantify the population trajectory and its demographic drivers in the Korean fir (Abies koreana), a subalpine conifer endemic to South Korea and listed as endangered by the IUCN, using a Bayesian Integral Projection Model (IPM). Based on eight years of field monitoring of survival, growth, and recruitment, the Bayesian IPM estimated the population growth rate (λs) and quantified its uncertainty under interannual environmental variation. The results indicated that interannual variation in drought, represented by the Standardized Precipitation–Evapotranspiration Index (SPEI), was a key driver of demographic changes. The mean population growth rate (λ = 0.983) suggests a slow decline, primarily driven by high mortality among intermediate-sized individuals, which are vital for maintaining population stability. In contrast, the growth of small to medium trees showed a weak but positive elasticity, implying that management actions targeting these size classes could benefit population persistence. Accordingly, effective conservation of A. koreana should focus on mitigating drought stress through reducing competition and improving soil moisture and structure. Full article
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16 pages, 7148 KB  
Article
Variety-Driven Effect of Rhizosphere Microbial-Specific Recruitment on Drought Tolerance of Medicago ruthenica (L.)
by Jing Xing, Wenqiang Fan, Jiani Wang and Fengling Shi
Microorganisms 2023, 11(12), 2851; https://doi.org/10.3390/microorganisms11122851 - 24 Nov 2023
Cited by 11 | Viewed by 2177
Abstract
As one of the environmental factors that seriously affect plant growth and crop production, drought requires an efficient but environmentally neutral approach to mitigate its harm to plants. Soil microbiomes can interact with plants and soil to improve the adverse effects of drought. [...] Read more.
As one of the environmental factors that seriously affect plant growth and crop production, drought requires an efficient but environmentally neutral approach to mitigate its harm to plants. Soil microbiomes can interact with plants and soil to improve the adverse effects of drought. Medicago ruthenica (L.) is an excellent legume forage with strong drought tolerance, but the key role of microbes in fighting drought stress remains unclear. What kind of flora plays a key role? Is the recruitment of such flora related to its genotype? Therefore, we selected three varieties of M. ruthenica (L.) for drought treatment, analyzed their growth and development as well as their physiological and biochemical characteristics, and performed 16S rRNA high-throughput sequencing analysis on their rhizosphere soils to clarify the variety-mediated response of rhizosphere bacteria to drought stress. It was found that among the three varieties of M. ruthenica (L.), Mengnong No.2, Mengnong No.1 and Zhilixing were subjected to drought stress and showed a reduction in plant height increment of 24.86%, 34.37%, and 31.97% and in fresh weight of 39.19%, 50.22%, and 41.12%, respectively, whereas dry weight was reduced by 23.26%, 26.10%, and 24.49%, respectively. At the same time, we found that the rhizosphere microbial community of Mengnong No. 2 was also less affected by drought, and it was able to maintain the diversity of rhizosphere soil microflora stable after drought stress, while Mennong No. 1 and Zhilixing were affected by drought stress, resulting in a decrease in rhizosphere soil bacterial community diversity indices to 92.92% and 82.27%, respectively. Moreover, the rhizosphere of Mengnon No. 2 was enriched with more nitrogen-fixing bacteria Rhizobium than the other two varieties of M. ruthenica (L.), which made it still have a good ability to accumulate aboveground biomass after drought stress. In conclusion, this study proves that the enrichment process of bacteria is closely related to plant genotype, and different varieties enrich different types of bacteria in the rhizosphere to help them adapt to drought stress, and the respective effects are quite different. Our results provide new evidence for the study of bacteria to improve the tolerance of plants to drought stress and lay a foundation for the screening and study mechanism of drought-tolerant bacteria in the future. Full article
(This article belongs to the Section Plant Microbe Interactions)
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14 pages, 1381 KB  
Article
Projected Climate and Hydroregime Variability Constrain Ephemeral Wetland-Dependent Amphibian Populations in Simulations of Southern Toads
by Jill A. Awkerman and Cathryn H. Greenberg
Ecologies 2022, 3(2), 235-248; https://doi.org/10.3390/ecologies3020018 - 17 Jun 2022
Cited by 6 | Viewed by 3123
Abstract
Amphibian populations are threatened globally by stressors, including diminishing availability of suitable wetland breeding sites, altered hydroregimes driven by changing weather patterns, and exposure to contaminants. Ecological risk assessment should encompass spatial and temporal scales that capture influential ecological processes and demographic responses. [...] Read more.
Amphibian populations are threatened globally by stressors, including diminishing availability of suitable wetland breeding sites, altered hydroregimes driven by changing weather patterns, and exposure to contaminants. Ecological risk assessment should encompass spatial and temporal scales that capture influential ecological processes and demographic responses. Following the PopGUIDE framework of population model development for risk assessment, we used matrix population models, in conjunction with existing hydroregime predictions, under a climate change scenario to evaluate the effects of environmental stochasticity and aquatic pesticide exposure on amphibians that are dependent on ephemeral wetlands. Using southern toads (Anaxyrus terrestris) as an example, we simulated population dynamics with breeding success dependent on hydroregime suitability. Years were defined as optimal, marginal, or insufficient for successful toad recruitment, based on the duration of their potential breeding season and rate of larval development to metamorphosis. We simulated both probabilistic and chronologically specific population projections, including variable annual fecundity, based on hydroregime suitability and reduced larval survival from carbaryl exposure. In our simulations, populations were more negatively impacted by prolonged drought, and consequently multiple sequential years of reproductive failure, than by aquatic pesticide exposure. These results highlight the necessity of reliable climate projections to accurately represent the effects of altered hydroregimes on amphibian populations. Risk assessment approaches could be improved with flexible modifications that allow inclusion of various extrinsic stressors and identification of demographic and ecological vulnerabilities when precise data are lacking. Full article
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21 pages, 368 KB  
Article
Dynamics of Invertebrate Diversity in a Tropical Stream
by Richard G. Pearson
Diversity 2014, 6(4), 771-791; https://doi.org/10.3390/d6040771 - 5 Dec 2014
Cited by 20 | Viewed by 8844
Abstract
Regional studies of biotic communities are important for characterising their normal spatial and temporal variation, but there are few such studies of tropical streams. This paper describes changes in invertebrate communities in Yuccabine Creek, a seasonal upland rainforest stream in tropical Australia, over [...] Read more.
Regional studies of biotic communities are important for characterising their normal spatial and temporal variation, but there are few such studies of tropical streams. This paper describes changes in invertebrate communities in Yuccabine Creek, a seasonal upland rainforest stream in tropical Australia, over three-year and decadal periods. Invertebrate abundance, richness and evenness were temporally stable, except after major drying or wet-season flows, from which they recovered quickly; however, three wet seasons contrasted in abundance patterns. Species’ responses to flood or drought varied depending on life-histories and habitat dynamics. Communities showed contrasts between wet, early-dry and late-dry seasons, with different characteristic species. Current velocity, leaf litter and substratum particle size were the main environmental correlates with species abundances and multivariate scores. Between-decade contrasts were due to antecedent rainfall and loss of canopy cover. Trophic composition varied seasonally, driven by abundances of predators and detritivores. Yuccabine Creek differs from comparable temperate streams in its high diversity of invertebrates, continual recruitment and spring-dominated continual leaf fall; and from some other tropical streams in its seasonal flow regime. Interpretation of invertebrate metrics in these streams needs to account for historical, antecedent and current conditions, but biannual samples would adequately characterise the fauna. Full article
(This article belongs to the Special Issue Global Freshwater Biodiversity)
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