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Keywords = dDNP NMR

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16 pages, 6028 KB  
Article
Parahydrogen-Based Hyperpolarization for the Masses at Millitesla Fields
by Garrett L. Wibbels, Clementinah Oladun, Tanner Y. O’Hara, Isaiah Adelabu, Joshua E. Robinson, Firoz Ahmed, Zachary T. Bender, Anna Samoilenko, Joseph Gyesi, Larisa M. Kovtunova, Oleg G. Salnikov, Igor V. Koptyug, Boyd M. Goodson, W. Michael Snow, Eduard Y. Chekmenev and Roman V. Shchepin
Magnetochemistry 2025, 11(9), 80; https://doi.org/10.3390/magnetochemistry11090080 - 22 Sep 2025
Cited by 2 | Viewed by 766
Abstract
Hyperpolarization (HP) techniques, such as Parahydrogen-Induced Polarization (PHIP), Signal Amplification by Reversible Exchange (SABRE), and dissolution Dynamic Nuclear Polarization (d-DNP), significantly enhance the sensitivity of nuclear magnetic resonance (NMR) spectroscopy for chemical analysis and metabolic imaging. However, the high cost of equipment, ranging [...] Read more.
Hyperpolarization (HP) techniques, such as Parahydrogen-Induced Polarization (PHIP), Signal Amplification by Reversible Exchange (SABRE), and dissolution Dynamic Nuclear Polarization (d-DNP), significantly enhance the sensitivity of nuclear magnetic resonance (NMR) spectroscopy for chemical analysis and metabolic imaging. However, the high cost of equipment, ranging from tens of thousands to millions of dollars, limits accessibility of hyperpolarization for the broad scientific community. In this work, we aim to mitigate some of the challenges by developing a cost-effective solution for parahydrogen (pH2)-based PHIP and SABRE HP methods. A custom coil-winding machine was designed to fabricate solenoid magnet coils, which were then evaluated for their magnetic field profiles, demonstrating a high degree of magnetic field homogeneity. A model 1H SABRE experiment successfully implemented the constructed solenoid, achieving efficient hyperpolarization. Additionally, the solenoid magnet can be utilized for in situ detection of hyperpolarization when integrated with a low-field NMR spectrometer, reducing the total setup cost to a few thousand dollars. These findings suggest that our approach makes HP technology more affordable and accessible, potentially broadening its applications in chemical and biomedical research, as well as educational settings involving undergraduate student researchers. This work provides a practical pathway to lower the financial barriers associated with pH2 HP setups. Full article
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22 pages, 1999 KB  
Review
Revealing the Complexity of Polysaccharides: Advances in NMR Spectroscopy for Structural Elucidation and Functional Characterization
by Yaqin Liu, Lina Gao and Zeling Yu
Appl. Sci. 2025, 15(10), 5246; https://doi.org/10.3390/app15105246 - 8 May 2025
Cited by 3 | Viewed by 2350
Abstract
Polysaccharides are important biomolecules, which play a key role in biological, medical, and industrial processes due to their diverse structures and important functions. This paper looks into the significant progress made in the structural and functional analysis of polysaccharides by nuclear magnetic resonance [...] Read more.
Polysaccharides are important biomolecules, which play a key role in biological, medical, and industrial processes due to their diverse structures and important functions. This paper looks into the significant progress made in the structural and functional analysis of polysaccharides by nuclear magnetic resonance (NMR) spectroscopy. NMR spectroscopy, including solution-state and solid-state technology, has revolutionized this field through detailed molecular insights into the structure, conformation, and dynamics of polysaccharides at the molecular level. There have been some important historical breakthroughs in 1D and 2D NMR, which have led to modern methods like multidimensional NMR and nuclear dynamic polarization (DNP). These modern methods offer a high level of resolution and sensitivity and have made it easier to come up with innovative applications. The applications range from the structural elucidation of microbial and plant structures of polysaccharides to improving food texture, developing therapies, and creating sustainable materials. Despite challenges such as signal overlap and limited sensitivity, emerging solutions are making significant progress. Computational modeling, isotope labeling, and integrated methods that combine complementary technologies are driving the boundaries of polysaccharide research. This review demonstrates the transformative role of NMR in revealing the complexity of polysaccharides and its potential to promote future discoveries and new ideas in the dynamic field. Full article
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18 pages, 9732 KB  
Article
Hyperpolarized 13C NMR Reveals Pathway Regulation in Lactococcus lactis and Metabolic Similarities and Differences Across the Tree of Life
by Sebastian Meier, Alexandra L. N. Zahid, Lucas Rebien Jørgensen, Ke-Chuan Wang, Peter Ruhdal Jensen and Pernille Rose Jensen
Molecules 2024, 29(17), 4133; https://doi.org/10.3390/molecules29174133 - 30 Aug 2024
Cited by 5 | Viewed by 1991
Abstract
The control of metabolic networks is incompletely understood, even for glycolysis in highly studied model organisms. Direct real-time observations of metabolic pathways can be achieved in cellular systems with 13C NMR using dissolution Dynamic Nuclear Polarization (dDNP NMR). The method relies on [...] Read more.
The control of metabolic networks is incompletely understood, even for glycolysis in highly studied model organisms. Direct real-time observations of metabolic pathways can be achieved in cellular systems with 13C NMR using dissolution Dynamic Nuclear Polarization (dDNP NMR). The method relies on a short-lived boost of NMR sensitivity using a redistribution of nuclear spin states to increase the alignment of the magnetic moments by more than four orders of magnitude. This temporary boost in sensitivity allows detection of metabolism with sub-second time resolution. Here, we hypothesized that dDNP NMR would be able to investigate molecular phenotypes that are not easily accessible with more conventional methods. The use of dDNP NMR allows real-time insight into carbohydrate metabolism in a Gram-positive bacterium (Lactoccocus lactis), and comparison to other bacterial, yeast and mammalian cells shows differences in the kinetic barriers of glycolysis across the kingdoms of life. Nevertheless, the accumulation of non-toxic precursors for biomass at kinetic barriers is found to be shared across the kingdoms of life. We further find that the visualization of glycolysis using dDNP NMR reveals kinetic characteristics in transgenic strains that are not evident when monitoring the overall glycolytic rate only. Finally, dDNP NMR reveals that resting Lactococcus lactis cells use the influx of carbohydrate substrate to produce acetoin rather than lactate during the start of glycolysis. This metabolic regime can be emulated using suitably designed substrate mixtures to enhance the formation of the C4 product acetoin more than 400-fold. Overall, we find that dDNP NMR provides analytical capabilities that may help to clarify the intertwined mechanistic determinants of metabolism and the optimal usage of biotechnologically important bacteria. Full article
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18 pages, 10019 KB  
Article
Conversion of Similar Xenochemicals to Dissimilar Products: Exploiting Competing Reactions in Whole-Cell Catalysis
by Francesca Sannelli, Nikoline Corell Sindahl, Stefan S. Warthegau, Pernille Rose Jensen and Sebastian Meier
Molecules 2023, 28(13), 5157; https://doi.org/10.3390/molecules28135157 - 1 Jul 2023
Viewed by 2172
Abstract
Many enzymes have latent activities that can be used in the conversion of non-natural reactants for novel organic conversions. A classic example is the conversion of benzaldehyde to a phenylacetyl carbinol, a precursor for ephedrine manufacture. It is often tacitly assumed that purified [...] Read more.
Many enzymes have latent activities that can be used in the conversion of non-natural reactants for novel organic conversions. A classic example is the conversion of benzaldehyde to a phenylacetyl carbinol, a precursor for ephedrine manufacture. It is often tacitly assumed that purified enzymes are more promising catalysts than whole cells, despite the lower cost and easier maintenance of the latter. Competing substrates inside the cell have been known to elicit currently hard-to-predict selectivities that are not easily measured inside the living cell. We employ NMR spectroscopic assays to rationally combine isomers for selective reactions in commercial S. cerevisiae. This approach uses internal competition between alternative pathways of aldehyde clearance in yeast, leading to altered selectivities compared to catalysis with the purified enzyme. In this manner, 4-fluorobenzyl alcohol and 2-fluorophenylacetyl carbinol can be formed with selectivities in the order of 90%. Modification of the cellular redox state can be used to tune product composition further. Hyperpolarized NMR shows that the cellular reaction and pathway usage are affected by the xenochemical. Overall, we find that the rational construction of ternary or more complex substrate mixtures can be used for in-cell NMR spectroscopy to optimize the upgrading of similar xenochemicals to dissimilar products with cheap whole-cell catalysts. Full article
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13 pages, 18086 KB  
Article
Linearly Polarized High-Purity Gaussian Beam Shaping and Coupling for 330 GHz/500 MHz DNP-NMR Application
by Xingchen Yang, Chaohai Du, Ziwen Zhang, Juanfeng Zhu, Tiejun Huang and Pukun Liu
Electronics 2021, 10(13), 1508; https://doi.org/10.3390/electronics10131508 - 22 Jun 2021
Cited by 1 | Viewed by 2497
Abstract
Terahertz waves generated by vacuum electron devices have been successfully applied in dynamic nuclear polarization enhanced nuclear magnetic resonance (DNP-NMR) technology to significantly enhance the sensitivity of high-field NMR. To reduce the magnetic field interference, the high-power terahertz wave source and the NMR [...] Read more.
Terahertz waves generated by vacuum electron devices have been successfully applied in dynamic nuclear polarization enhanced nuclear magnetic resonance (DNP-NMR) technology to significantly enhance the sensitivity of high-field NMR. To reduce the magnetic field interference, the high-power terahertz wave source and the NMR spectrometer need to be separated by a few meters apart. Corrugated horns and directional couplers are key components for shaping high linearly polarized terahertz Gaussian beam and accurately coupling electromagnetic power in the transmission system. In this paper, a corrugated TE11-HE11 mode converter and a three-port directional coupler realized by its inner cylindrical wire array are proposed for a 330 GHz/500 MHz DNP-NMR system. The output mode of the mode converter presents a characteristic of highly linear polarization, which is 98.8% at 330 GHz for subsequent low loss transmission. The designed three-port directional coupler can produce approximately −33 dB electromagnetic wave power on port 3 in the frequency range between 300–360 GHz stably, which can be used to measure the electromagnetic wave power of the transmission line in real-time. The designed mode converter and direction coupler can be installed and replaced easily in the corrugated waveguide transmission system. Full article
(This article belongs to the Special Issue High-Frequency Vacuum Electron Devices)
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10 pages, 1693 KB  
Article
Structural Analysis and Immuno-Stimulating Activity of an Acidic Polysaccharide from the Stems of Dendrobium nobile Lindl.
by Jun-Hui Wang, Shu-Rong Zuo and Jian-Ping Luo
Molecules 2017, 22(4), 611; https://doi.org/10.3390/molecules22040611 - 10 Apr 2017
Cited by 35 | Viewed by 5666
Abstract
Dendrobium nobile Lindl., an epiphytic herb distributed in the Southeast Asia, is used as a tonic and antipyretic herbal medicine in China. In this study, a water-soluble acidic heteropolysaccharide, DNP-W4, containing mannose, glucose, galactose, xylose, rhamnose, and galacturonic acid, in the molar ratios [...] Read more.
Dendrobium nobile Lindl., an epiphytic herb distributed in the Southeast Asia, is used as a tonic and antipyretic herbal medicine in China. In this study, a water-soluble acidic heteropolysaccharide, DNP-W4, containing mannose, glucose, galactose, xylose, rhamnose, and galacturonic acid, in the molar ratios of 1.0:4.9:2.5:0.5:1.0:0.9, was obtained from the stems of Dendrobium nobile Lindl. Using methylation analysis, partial acid hydrolysis, pectolyase treatment, NMR, and ESI-MS, the structure of DNP-W4 was elucidated. The obtained data indicated that DNP-W4 was a complex heteropolysaccharide and possessed a backbone composed of (1→4)-linked β-d-Glcp, (1→6)-linked β-d-Glcp, and (1→6)-linked β-d-Galp, with substitutes at O-4/6 of Glcp residues and O-3 of Galp. The branches of DNP-W4 were composed of terminal Manp, (1→6)-linked β-d-Manp, (1→3)-linked β-d-Glcp, β-d-Glcp, β-d-Galp, (1→4)-linked α-d-GalAp, (1→2)-linked α-L-Rhap, and Xylp. DNP-W4 had little immunological activities, but its derivatives had immuno-stimulating activities to some extent. Full article
(This article belongs to the Special Issue Natural Polysaccharides)
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11 pages, 1831 KB  
Article
1H and 15N NMR Analyses on Heparin, Heparan Sulfates and Related Monosaccharides Concerning the Chemical Exchange Regime of the N-Sulfo-Glucosamine Sulfamate Proton
by Vitor H. Pomin
Pharmaceuticals 2016, 9(3), 58; https://doi.org/10.3390/ph9030058 - 7 Sep 2016
Cited by 11 | Viewed by 7837
Abstract
Heparin and heparan sulfate are structurally related glycosaminoglycans (GAGs). Both GAGs present, although in different concentrations, N-sulfo-glucosamine (GlcNS) as one of their various composing units. The conditional fast exchange property of the GlcNS sulfamate proton in these GAGs has been pointed as [...] Read more.
Heparin and heparan sulfate are structurally related glycosaminoglycans (GAGs). Both GAGs present, although in different concentrations, N-sulfo-glucosamine (GlcNS) as one of their various composing units. The conditional fast exchange property of the GlcNS sulfamate proton in these GAGs has been pointed as the main barrier to its signal detection via NMR experiments, especially 1H-15N HSQC. Here, a series of NMR spectra is collected on heparin, heparan sulfate and related monosaccharides. The N-acetyl glucosamine-linked uronic acid types of these GAGs were properly assigned in the 1H-15N HSQC spectra. Dynamic nuclear polarization (DNP) was employed in order to facilitate 1D spectral acquisition of the sulfamate 15N signal of free GlcNS. Analyses on the multiplet pattern of scalar couplings of GlcNS 15N has helped to understand the chemical properties of the sulfamate proton in solution. The singlet peak observed for GlcNS happens due to fast chemical exchange of the GlcNS sulfamate proton in solution. Analyses on kinetics of alpha-beta anomeric mutarotation via 1H NMR spectra have been performed in GlcNS as well as other glucose-based monosaccharides. 1D 1H and 2D 1H-15N HSQC spectra recorded at low temperature for free GlcNS dissolved in a proton-rich solution showed signals from all exchangeable protons, including those belonging to the sulfamate group. This work suits well to the current grand celebration of one-century-anniversary of the discovery of heparin. Full article
(This article belongs to the Special Issue Grand Celebration: 100th Anniversary of the Discovery of Heparin)
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