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Keywords = biogeoscience

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26 pages, 2897 KB  
Article
Molecular Diversity and Biochemical Content in Two Invasive Alien Species: Looking for Chemical Similarities and Bioactivities
by Julia Vega, Teresa S. Catalá, Jorge García-Márquez, Linn G. Speidel, Salvador Arijo, Niklas Cornelius Kunz, Christoph Geisler and Félix L. Figueroa
Mar. Drugs 2023, 21(1), 5; https://doi.org/10.3390/md21010005 - 22 Dec 2022
Cited by 25 | Viewed by 6388
Abstract
The biochemical composition, molecular diversity, and two different bioactivities of Asparagopsis armata and Rugulopteryx okamurae (two alien species with different invasive patterns in the southern Iberian Peninsula) were analyzed through spectrophotometric methods and Fourier transform ion cyclotron mass spectroscopy (FT-ICR-MS). A total of [...] Read more.
The biochemical composition, molecular diversity, and two different bioactivities of Asparagopsis armata and Rugulopteryx okamurae (two alien species with different invasive patterns in the southern Iberian Peninsula) were analyzed through spectrophotometric methods and Fourier transform ion cyclotron mass spectroscopy (FT-ICR-MS). A total of 3042 molecular formulas were identified from the different extracts. The dH2O extracts were the most molecularly different. A. armata presented the highest content of nitrogenous compounds (proteins, CHON) and sulphur content, whereas R. okamurae was rich in carbonated compounds (total carbon, lipids, CHO, and CHOP). Antioxidant capacity and phenolic content were higher in R. okamurae than in A. armata. Antimicrobial activity was detected from both species. A. armata showed capacity to inhibit human and fish pathogens (e.g., Staphylococcus aureus or Vibrio anguillarum), whereas R. okamurae only showed inhibition against human bacteria (Staphylococcus aureus and Cutibacterium acnes). In R. okamurae, molecules with a great number of pharmaceutical activities (e.g., anti-inflammatory or antitumoral), antibacterial, biomaterial, and other utilities were found. The main molecules of A. armata had also pharmaceutical applications (e.g., antimalarian, antithrombotic, anti-inflammatory, or antiarthritis). The valorization of these species can help to counteract the environmental effects of the bioinvasions. Full article
(This article belongs to the Special Issue Marine Invasive Species and Their Bioactive Metabolites)
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21 pages, 2196 KB  
Article
Soil Respiration Is Influenced by Seasonality, Forest Succession and Contrasting Biophysical Controls in a Tropical Dry Forest in Northwestern Mexico
by Martha L. Vargas-Terminel, Dulce Flores-Rentería, Zulia M. Sánchez-Mejía, Nidia E. Rojas-Robles, Maritza Sandoval-Aguilar, Bruno Chávez-Vergara, Agustín Robles-Morua, Jaime Garatuza-Payan and Enrico A. Yépez
Soil Syst. 2022, 6(4), 75; https://doi.org/10.3390/soilsystems6040075 - 26 Sep 2022
Cited by 18 | Viewed by 5971
Abstract
Soil respiration (RS) is an important component of the C cycle because it contributes significant CO2 emissions to the atmosphere that result from metabolism and respiration of its autotrophic and heterotrophic components. However, the relative importance of different biophysical controls [...] Read more.
Soil respiration (RS) is an important component of the C cycle because it contributes significant CO2 emissions to the atmosphere that result from metabolism and respiration of its autotrophic and heterotrophic components. However, the relative importance of different biophysical controls that drive the variability of this flux and their influence along forest succession pathways is still unknown. We incorporate multiyear RS, ecosystem flux and meteorological measurements in old-growth (OG), mid-secondary (MS) and early-secondary (ES) tropical dry forests (TDFs) with the goal of assessing the temporal variation of RS and identifying the biophysical controls at each site by applying structural equation models (SEM). Along forest succession, RS followed the pattern of precipitation events; we identified by the end of the wet season that RS was sustained by a longer period at OG, while in MS and ES, RS decreased according to the soil moisture availability. According to SEM, soil moisture and soil temperature exert an effect on the variability of RS in all sites. However, we found that RS was also controlled by the vapor pressure deficit at MS and gross primary production at OG and ES. Our results suggest that seasonality has a different impact on RS along forest succession in TDFs found in northwestern Mexico and highlights the relevance of considering additional biophysical controls of RS for a better understanding this critical process of the C cycle. Full article
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22 pages, 3493 KB  
Review
Magnetotactic Bacteria and Magnetosomes: Basic Properties and Applications
by Kamil G. Gareev, Denis S. Grouzdev, Petr V. Kharitonskii, Andrei Kosterov, Veronika V. Koziaeva, Elena S. Sergienko and Maxim A. Shevtsov
Magnetochemistry 2021, 7(6), 86; https://doi.org/10.3390/magnetochemistry7060086 - 18 Jun 2021
Cited by 47 | Viewed by 21435
Abstract
Magnetotactic bacteria (MTB) belong to several phyla. This class of microorganisms exhibits the ability of magneto-aerotaxis. MTB synthesize biominerals in organelle-like structures called magnetosomes, which contain single-domain crystals of magnetite (Fe3O4) or greigite (Fe3S4) characterized [...] Read more.
Magnetotactic bacteria (MTB) belong to several phyla. This class of microorganisms exhibits the ability of magneto-aerotaxis. MTB synthesize biominerals in organelle-like structures called magnetosomes, which contain single-domain crystals of magnetite (Fe3O4) or greigite (Fe3S4) characterized by a high degree of structural and compositional perfection. Magnetosomes from dead MTB could be preserved in sediments (called fossil magnetosomes or magnetofossils). Under certain conditions, magnetofossils are capable of retaining their remanence for millions of years. This accounts for the growing interest in MTB and magnetofossils in paleo- and rock magnetism and in a wider field of biogeoscience. At the same time, high biocompatibility of magnetosomes makes possible their potential use in biomedical applications, including magnetic resonance imaging, hyperthermia, magnetically guided drug delivery, and immunomagnetic analysis. In this review, we attempt to summarize the current state of the art in the field of MTB research and applications. Full article
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16 pages, 1525 KB  
Article
Sub-Surface Carbon Stocks in Northern Taiga Landscapes Exposed in the Batagay Megaslump, Yana Upland, Yakutia
by Andrei G. Shepelev, Alexander Kizyakov, Sebastian Wetterich, Alexandra Cherepanova, Alexander Fedorov, Igor Syromyatnikov and Grigoriy Savvinov
Land 2020, 9(9), 305; https://doi.org/10.3390/land9090305 - 29 Aug 2020
Cited by 8 | Viewed by 9317
Abstract
The most massive and fast-eroding thaw slump of the Northern Hemisphere located in the Yana Uplands of Northern Yakutia was investigated to assess in detail the cryogenic inventory and carbon pools of two distinctive Ice Complex stratigraphic units and the uppermost cover deposits. [...] Read more.
The most massive and fast-eroding thaw slump of the Northern Hemisphere located in the Yana Uplands of Northern Yakutia was investigated to assess in detail the cryogenic inventory and carbon pools of two distinctive Ice Complex stratigraphic units and the uppermost cover deposits. Differentiating into modern and Holocene near-surface layers (active layer and shielding layer), highest total carbon contents were found in the active layer (18.72 kg m−2), while the shielding layer yielded a much lower carbon content of 1.81 kg m−2. The late Pleistocene upper Ice Complex contained 10.34 kg m−2 total carbon, and the mid-Pleistocene lower Ice Complex 17.66 kg m−2. The proportion of organic carbon from total carbon content is well above 70% in all studied units with 94% in the active layer, 73% in the shielding layer, 83% in the upper Ice Complex and 79% in the lower Ice Complex. Inorganic carbon is low in the overall structure of the deposits. Full article
(This article belongs to the Special Issue Permafrost Landscape)
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17 pages, 2281 KB  
Article
Response of Black Ash Wetland Gaseous Soil Carbon Fluxes to a Simulated Emerald Ash Borer Infestation
by Matthew Van Grinsven, Joseph Shannon, Nicholas Bolton, Joshua Davis, Nam Jin Noh, Joseph Wagenbrenner, Randall Kolka and Thomas Pypker
Forests 2018, 9(6), 324; https://doi.org/10.3390/f9060324 - 4 Jun 2018
Cited by 10 | Viewed by 4719
Abstract
The rapid and extensive expansion of emerald ash borer (EAB) in North America since 2002 may eliminate most existing ash stands, likely affecting critical ecosystem services associated with water and carbon cycling. To our knowledge, no studies have evaluated the coupled response of [...] Read more.
The rapid and extensive expansion of emerald ash borer (EAB) in North America since 2002 may eliminate most existing ash stands, likely affecting critical ecosystem services associated with water and carbon cycling. To our knowledge, no studies have evaluated the coupled response of black ash (Fraxinus nigra Marsh.) wetland water tables, soil temperatures, and soil gas fluxes to an EAB infestation. Water table position, soil temperature, and soil CO2 and CH4 fluxes were monitored in nine depressional headwater black ash wetlands in northern Michigan. An EAB disturbance was simulated by girdling (girdle) or felling (ash-cut) all black ash trees with diameters greater than 2.5 cm within treated wetlands (n = 3 per treatment). Soil gas fluxes were sensitive to water table position, temperature, and disturbance. Soil CO2 fluxes were significantly higher, and high soil CH4 fluxes occurred more frequently in disturbed sites. Soil CH4 fluxes in ash-cut were marginally significantly higher than girdle during post-treatment, yet both were similar to control sites. The strong connection between depressional black ash wetland study sites and groundwater likely buffered the magnitude of disturbance-related impact on water tables and carbon cycling. Full article
(This article belongs to the Special Issue Understanding and Managing Emerald Ash Borer Impacts on Ash Forests)
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