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20 pages, 7153 KiB  
Article
Integrative Transcriptome and Metabolome Analysis Reveals Candidate Genes Related to Terpenoid Synthesis in Amylostereum areolatum (Russulales: Amylostereaceae)
by Lixia Wang, Ningning Fu, Ming Wang, Zhongyi Zhan, Youqing Luo, Jianrong Wu and Lili Ren
J. Fungi 2025, 11(5), 383; https://doi.org/10.3390/jof11050383 - 16 May 2025
Viewed by 447
Abstract
Amylostereum areolatum (Chaillet ex Fr.) Boidin (Russulales: Amylostereaceae) is a symbiotic fungus of Sirex noctilio Fabricius that has ecological significance. Terpenoids are key mediators in fungal–insect interactions, yet the biosynthetic mechanisms of terpenoids in this species remain unclear. Under nutritional conditions [...] Read more.
Amylostereum areolatum (Chaillet ex Fr.) Boidin (Russulales: Amylostereaceae) is a symbiotic fungus of Sirex noctilio Fabricius that has ecological significance. Terpenoids are key mediators in fungal–insect interactions, yet the biosynthetic mechanisms of terpenoids in this species remain unclear. Under nutritional conditions that mimic natural growth, A. areolatum was sampled during the lag phase (day 7), exponential phase (day 14), and stationary phase (day 21). Metabolome (solid-phase microextraction (SPME) combined with gas chromatography–mass spectrometry (GC-MS) and liquid chromatography–mass spectrometry (LC-MS)) and transcriptome (Illumina NovaSeq) profiles were integrated to investigate terpenoid–gene correlations. This analysis identified 103 terpenoids in A. areolatum, substantially expanding the known repertoire of terpenoid compounds in this species. Total terpenoid abundance progressively increased across three developmental stages, with triterpenoids and sesquiterpenoids demonstrating the highest diversity and abundance levels. Transcriptomic profiling (61.66 Gb clean data) revealed 26 terpenoid biosynthesis-associated genes, establishing a comprehensive transcriptional framework for fungal terpenoid metabolism. Among 11 differentially expressed genes (DEGs) (|log2Fold Change| ≥ 1, adjusted p < 0.05), HMGS1, HMGR2, and AaTPS1-3 emerged as key regulators potentially governing terpenoid biosynthesis. These findings provide foundational insights into the molecular mechanisms underlying terpenoid production in A. areolatum and related basidiomycetes. Full article
(This article belongs to the Special Issue Fungal Metabolomics and Genomics)
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18 pages, 718 KiB  
Article
Investigation of the Possible Antibacterial Effects of Corticioid Fungi Against Different Bacterial Species
by Eugene Yurchenko, Małgorzata Krasowska, Małgorzata Kowczyk-Sadowy and Ewa Zapora
Int. J. Mol. Sci. 2025, 26(7), 3292; https://doi.org/10.3390/ijms26073292 - 2 Apr 2025
Viewed by 442
Abstract
Extracts from 58 species of corticioid fungi (phylum Basidiomycota), mainly belonging to the orders Hymenochaetales, Polyporales and Russulales, were tested for their inhibitory activity against five species of bacteria: Corynebacterium striatum, Haemophilus influenzae, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Staphylococcus [...] Read more.
Extracts from 58 species of corticioid fungi (phylum Basidiomycota), mainly belonging to the orders Hymenochaetales, Polyporales and Russulales, were tested for their inhibitory activity against five species of bacteria: Corynebacterium striatum, Haemophilus influenzae, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Staphylococcus aureus. Twenty-four of the species we analyzed in this study were tested for antibacterial activity for the first time. The fruiting bodies of the fungi were collected from dead wood in the forests of north-eastern Poland, and macerated in methanol. Dried extracts were redissolved in dimethyl sulfoxide and applied to broth cultures of the bacteria, which were then inoculated on agar plates. Noblesia crocea demonstrated moderate inhibitory activity against all five tested bacteria; Amylocorticium subincarnatum, Laxitextum bicolor, Peniophora laeta, P. rufomarginata, Phanerochaete sordida, and Xylobolus frustulatus inhibited four bacterial species. The extracts from 14 fungal species tested were moderately active against only two bacteria, P. aeruginosa and C. striatum; 17 species were active against C. striatum only. The full inhibition was observed with concentrations of extract 25 or 50 mg/mL. Full article
(This article belongs to the Special Issue Novel Antimicrobial Agents)
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14 pages, 2505 KiB  
Article
Finding Spalting Fungi in the Peruvian Tropical Premontane Cloud Forest on Peruvian Native Wood Species
by Javier F. Illescas Guevara, Kevin P. Candiotti Martinez, Patricia T. Vega Gutierrez, Martin Araujo Flores and Sarath M. Vega Gutierrez
Forests 2024, 15(12), 2078; https://doi.org/10.3390/f15122078 - 25 Nov 2024
Cited by 1 | Viewed by 1227
Abstract
Tropical montane and premontane forests are diverse, including fungi. However, little is known about spalting fungi (decay fungi that change the color of wood) in tropical regions despite the economic importance they could bring by enhancing wood esthetics. To increase the knowledge of [...] Read more.
Tropical montane and premontane forests are diverse, including fungi. However, little is known about spalting fungi (decay fungi that change the color of wood) in tropical regions despite the economic importance they could bring by enhancing wood esthetics. To increase the knowledge of the diversity of spalting fungi, a sampling of fallen logs, branches (exposing xylem to identify potential pigmenting and zone line-producing fungi), and fruiting bodies (on wood) was conducted in the premontane moist forest in the district of San Ramon, Junín, Peru. The fungi were collected, cultured, isolated, and sequenced. Also, the identified species were used in a novel test to confirm they were producing spalting on Guazuma crinita. The species found belong to the Ascomycota orders Xylariales and Diaporthales and the Basidiomycota orders Agaricales, Polyporales, and Russulales. The fungi collected produced bleaching, different colors of zone lines, and pigmentation in laboratory conditions. The results increase the database of spalted fungi in Peru, and the test used in this research could be the basis for a quick test to identify spalting fungi. Full article
(This article belongs to the Special Issue Phenomenon of Wood Colour)
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20 pages, 8558 KiB  
Article
Notes on the Ecology and Distribution of Species of the Genera of Bondarzewiaceae (Russulales and Basidiomycota) with an Emphasis on Amylosporus
by Shah Hussain, Moza Al-Kharousi, Dua’a Al-Maqbali, Arwa A. Al-Owaisi, Rethinasamy Velazhahan, Abdullah M. Al-Sadi and Mohamed N. Al-Yahya’ei
J. Fungi 2024, 10(9), 625; https://doi.org/10.3390/jof10090625 - 1 Sep 2024
Cited by 2 | Viewed by 1632
Abstract
The family Bondarzewiaceae is an important and diverse group of macrofungi associated with wood as white rotting fungi, and some species are forest tree pathogens. Currently, there are nine genera and approximately 89 species in the family, distributed in tropical, subtropical, and temperate [...] Read more.
The family Bondarzewiaceae is an important and diverse group of macrofungi associated with wood as white rotting fungi, and some species are forest tree pathogens. Currently, there are nine genera and approximately 89 species in the family, distributed in tropical, subtropical, and temperate climates. To address the phylogenetic relationships among the genera, a combined ITS-28S dataset was subjected to maximum likelihood (ML), Bayesian inference (BI), and time divergence analyses using the BEAST package. Both ML and BI analyses revealed two major clades, where one major clade consisted of Amylosporus, Stecchericium, and Wrightoporia austrosinensisa. The second major clade is composed of Bondarzewia, Heterobasidion, Gloiodon, Laurilia, Lauriliella, and Wrightoporia, indicating that these genera are phylogenetically similar. Wrightoporia austrosinensisa recovered outside of Wrightoporia, indicating that this species is phylogenetically different from the rest of the species of the genus. Similarly, time divergence analyses suggest that Bondarzewiaceae diversified around 114 million years ago (mya), possibly during the Early Cretaceous Epoch. The genus Amylosporus is well resolved within the family, with an estimated stem age of divergent around 62 mya, possibly during the Eocene Epoch. Further, the species of the genus are recovered in two sister clades. One sister clade consists of species with pileate basidiomata and generative hyphae with clamp connections, corresponding to the proposed section Amylosporus sect. Amylosporus. The other consists of species having resupinate basidiomata and generative hyphae without clamps, which is treated here as Amylosporus sect. Resupinati. We provided the key taxonomic characters, known distribution, number of species, and stem age of diversification of each section. Furthermore, we also described a new species, Amylosporus wadinaheezicus, from Oman, based on morphological characters of basidiomata and multigene sequence data of ITS, 28S, and Tef1-α. With pileate basidiomata and phylogenetic placement, the new species is classified under the proposed A. sect. Amylosporus. An identification key to the known species of Amylosporus is presented. Ecology and distribution of species of the genera in the family are discussed. Full article
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27 pages, 44592 KiB  
Article
Four New Fungal Species in Forest Ecological System from Southwestern China
by Yinglian Deng, Jinfa Li, Changlin Zhao and Jian Zhao
J. Fungi 2024, 10(3), 194; https://doi.org/10.3390/jof10030194 - 2 Mar 2024
Cited by 11 | Viewed by 2335
Abstract
Four new wood-inhabiting fungi were found in Southwestern China within the genera Phanerochaete, Phlebiopsis, Asterostroma, and Vararia of the families Phanerochaetaceae and Peniophoraceae, belonging to the orders Polyporales and Russulales individually. Combined with their morphological characteristics and molecular biological evidence, [...] Read more.
Four new wood-inhabiting fungi were found in Southwestern China within the genera Phanerochaete, Phlebiopsis, Asterostroma, and Vararia of the families Phanerochaetaceae and Peniophoraceae, belonging to the orders Polyporales and Russulales individually. Combined with their morphological characteristics and molecular biological evidence, the present study describes them as new fungal taxa. Asterostroma yunnanense is characterized by the resupinate, membranaceous to pellicular basidiomata with a cream to salmon-buff hymenial surface, hyphal system dimitic bearing simple-septa, thin- to thick-walled, yellowish brown asterosetae with acute tips, and thin-walled, echinulate, amyloid, globose basidiospores. Phanerochaete tongbiguanensis is characterized by the resupinate basidiomata with a white to cream hymenial surface, a monomitic hyphal system with simple-septa generative hyphae, the presence of subclavate cystidia covered with a lot of crystals, and oblong ellipsoid basidiospores (6–9 × 3–4.5 µm). Phlebiopsis fissurata is characterized by the membranaceous, tuberculate basidiomata with a buff to slightly brown hymenial surface, a monomitic hyphal system with simple-septa, conical cystidia, and broadly ellipsoid. Vararia yingjiangensis is characterized by a corky basidiomata with a pinkish buff to cinnamon-buff hymenial surface, cracking, yellowish dichohyphae with slightly curved tips, subulate gloeocystidia, and thick-walled, ellipsoid basidiospores (6.5–11.5 × 5–7 µm). The phylogenetic analyses of ITS + nLSU revealed that the two new species were nested into the genera Phanerochaete and Phlebiopsis within the family Phanerochaetaceae (Polyporales), in which Phanerochaete tongbiguanensis was sister to P. daliensis; Phlebiopsis fissurata was grouped with P. lamprocystidiata. Two new species were clustered into the genera Asterostroma and Vararia within the family Peniophoraceae (Russulales), in which Asterostroma yunnanense was sister to A. cervicolor; Vararia yingjiangensis formed a single branch. Full article
(This article belongs to the Special Issue Polyphasic Identification of Fungi 3.0)
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18 pages, 7154 KiB  
Article
Three New Species of Russulaceae (Russulales, Basidiomycota) from Southern China
by Sen Liu, Mengjia Zhu, Nemat O. Keyhani, Ziyi Wu, Huajun Lv, Zhiang Heng, Ruiya Chen, Yuxiao Dang, Chenjie Yang, Jinhui Chen, Pengyu Lai, Weibin Zhang, Xiayu Guan, Yanbin Huang, Yuxi Chen, Hailan Su and Junzhi Qiu
J. Fungi 2024, 10(1), 70; https://doi.org/10.3390/jof10010070 - 15 Jan 2024
Cited by 7 | Viewed by 2544
Abstract
The characterization of natural fungal diversity impacts our understanding of ecological and evolutionary processes and can lead to novel bioproduct discovery. Russula and Lactarius, both in the order Russulales, represent two large genera of ectomycorrhizal fungi that include edible as well as [...] Read more.
The characterization of natural fungal diversity impacts our understanding of ecological and evolutionary processes and can lead to novel bioproduct discovery. Russula and Lactarius, both in the order Russulales, represent two large genera of ectomycorrhizal fungi that include edible as well as toxic varieties. Based on morphological and phylogenetic analyses, including nucleotide sequences of the internal transcribed spacer (ITS), the 28S large subunit of ribosomal RNA (LSU), the second largest subunit of RNA polymerase II (RPB2), the ribosomal mitochondrial small subunit (mtSSU), and the translation elongation factor 1-α (TEF1-α) gene sequences, we here describe and illustrate two new species of Russula and one new species of Lactarius from southern China. These three new species are: R. junzifengensis (R. subsect. Virescentinae), R. zonatus (R. subsect. Crassotunicatae), and L. jianyangensis (L. subsect. Zonarii). Full article
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15 pages, 1483 KiB  
Article
Mechanical Egg Activation and Rearing of First Instar Larvae of Sirex noctilio (Hymenoptera: Siricidae)
by Elmarie van der Merwe, Bernard Slippers and Gudrun Dittrich-Schröder
Insects 2023, 14(12), 931; https://doi.org/10.3390/insects14120931 - 7 Dec 2023
Cited by 4 | Viewed by 2830
Abstract
Egg activation is a cellular transition of an arrested mature oocyte into a developing embryo through a coordinated series of events. Previous studies in Hymenoptera have indicated that mechanical pressure can induce egg activation. In this study, we developed the first egg activation [...] Read more.
Egg activation is a cellular transition of an arrested mature oocyte into a developing embryo through a coordinated series of events. Previous studies in Hymenoptera have indicated that mechanical pressure can induce egg activation. In this study, we developed the first egg activation protocol for the haplodiploid insect pest, Sirex noctilio (Hymenoptera: Siricidae), from two climatically different regions in South Africa to demonstrate the broad applicability of the method. In addition, activated eggs were exposed to three treatments involving water, pine sawdust, and the fungal symbiont of S. noctilio, Amylostereum areolatum (Russulales: Amylostereaceae), to determine if the symbiotic fungus is a requirement for egg development in an artificial laboratory environment, as the symbiotic fungus has been hypothesised to be necessary for egg and early larval development in a natural environment. A rearing protocol was developed for the first instar larvae using a modified Anoplophora glabripennis (Coleoptera: Cerambycidae) artificial diet. A significant difference between the mean survival rates of activated eggs from the two different regions was observed. Amylostereum areolatum was shown to be unnecessary for egg survival and adversely affected egg eclosion in an artificial laboratory environment. The maximum larval survival duration on the artificial diet was 92 days. The egg activation and rearing protocol developed in this study enables opportunities for research on the physiology, ecology, symbioses, and genetics of S. noctilio, which can be exploited for new genetic pest management strategies. Full article
(This article belongs to the Section Insect Physiology, Reproduction and Development)
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14 pages, 4028 KiB  
Article
Alteration of Colonic Bacterial and Fungal Composition and Their Inter- and Intra-Kingdom Interaction in Patients with Adenomas with Low-Grade Dysplasia
by Ding Heng, Min Zhang, Yuhan Yuan and Xinyun Qiu
Microorganisms 2023, 11(5), 1327; https://doi.org/10.3390/microorganisms11051327 - 18 May 2023
Cited by 1 | Viewed by 1952
Abstract
Colorectal cancer (CRC) develops from pre-cancerous cellular lesions in the gut epithelium and mainly originates from specific types of colonic adenomas with dysplasia. However, gut microbiota signatures among sampling sites in patients with colorectal adenomas with low-grade dysplasia (ALGD) and normal control (NC) [...] Read more.
Colorectal cancer (CRC) develops from pre-cancerous cellular lesions in the gut epithelium and mainly originates from specific types of colonic adenomas with dysplasia. However, gut microbiota signatures among sampling sites in patients with colorectal adenomas with low-grade dysplasia (ALGD) and normal control (NC) remain uncharacterized. To characterize gut microbial and fungal profiles in ALGD and normal colorectal mucosa tissues. We used 16S and ITS1-2 rRNA gene sequencing and bioinformatics analysis on the microbiota of ALGD and normal colorectal mucosa from 40 subjects. Bacterial sequences in the ALGD group showed an increase in Rhodobacterales, Thermales, Thermaceae, Rhodobacteraceae, and several genera, including Thermus, Paracoccus, Sphingobium, and Pseudomonas, compared to the NC group. Fungal sequences in the ALGD group showed an increase in Helotiales, Leotiomycetes, and Basidiomycota, while several orders, families, and genera, including Verrucariales, Russulales, and Trichosporonales, were decreased. The study found various interactions between intestinal bacteria and fungi. The bacterial functional analysis showed increased glycogen and vanillin degradation pathways in the ALGD group. Meanwhile, the fungal functional analysis showed a decrease in pathways related to the biosynthesis of gondoate and stearate, as well as degradation of glucose, starch, glycogen, sucrose, L-tryptophan, and pantothenate, and an increase in the octane oxidation pathway in the ALGD group. The mucosal microbiota in ALGD exhibits altered fungal and microbial composition compared to the NC mucosa, potentially contributing to the development of intestinal cancer by regulating specific metabolic pathways. Therefore, these changes in microbiota and metabolic pathways may be potential markers for diagnosing and treating colorectal adenoma and carcinoma. Full article
(This article belongs to the Special Issue Gut Microbiota in Disease)
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17 pages, 3790 KiB  
Review
Afforestation of Land Abandoned by Farmers Poses Threat to Forest Sustainability Due to Heterobasidion spp.
by Tomasz Oszako, Olga Kukina, Valentyna Dyshko, Warren Keith Moser, Sławomir Ślusarski, Adam Okorski and Piotr Borowik
Forests 2023, 14(5), 954; https://doi.org/10.3390/f14050954 - 5 May 2023
Cited by 4 | Viewed by 2204
Abstract
Heterobasidion annosum (Fr.) Bref. sensu lato (s.l.) is a dangerous forest pathogen causing root and butt rot disease in most conifers of the northern hemisphere. This pathogen is most widespread in the forests of Europe and North America. The economic impact on forestry [...] Read more.
Heterobasidion annosum (Fr.) Bref. sensu lato (s.l.) is a dangerous forest pathogen causing root and butt rot disease in most conifers of the northern hemisphere. This pathogen is most widespread in the forests of Europe and North America. The economic impact on forestry related to tree mortality, reduction in timber yield, and wood rot is calculated in millions of dollars and euros. The genus Heterobasidion (Basidiomycota; Russulales) has been relatively recently separated into three genetically distinct groups (H. annosum, H. insulare and H. araucariae) comprising a total of 12 species and one newly described hybrid taxon. These species are the best studied in terms of the ecology, the physiology of control methods, and the tree’s resistance to the pathogen. The article gives an overview of the symptoms and the etiology of the disease and provides information on ways to recognize the disease and limit the economic damage. Full article
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23 pages, 6819 KiB  
Article
A Contribution to Knowledge of Russula Section Ingratae (Russulales, Russulaceae) in China: Two New Taxa and Amended Descriptions of One Known Species
by Yunxiao Han, Zhiqun Liang and Niankai Zeng
Forests 2023, 14(4), 695; https://doi.org/10.3390/f14040695 - 28 Mar 2023
Cited by 2 | Viewed by 2015
Abstract
Russula, one of the main genera of Russulaceae (Russulales), is both ecologically and economically important. It is a large and complex genus including eight subgenera. Although many studies have focused on Russula in China, the diversity still remains incompletely understood. In the [...] Read more.
Russula, one of the main genera of Russulaceae (Russulales), is both ecologically and economically important. It is a large and complex genus including eight subgenera. Although many studies have focused on Russula in China, the diversity still remains incompletely understood. In the present study, several collections of Russula subgen. Heterophyllidiae sect. Ingratae from China were studied based on morphology and molecular phylogenetic analyses. Three species were recognized, two of them described as new, R. fujianensis and R. oraria, and one of them already a known taxon, R. rufobasalis. Detailed descriptions, color photos of fresh basidiomata, and line-drawings of microstructures of the three species are presented. Full article
(This article belongs to the Special Issue Fungal Biodiversity, Systematics, and Evolution)
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20 pages, 3788 KiB  
Article
Taxonomy and Phylogeny of Peniophora Sensu Lato (Russulales, Basidiomycota)
by Yun-Lin Xu, Yan Tian and Shuang-Hui He
J. Fungi 2023, 9(1), 93; https://doi.org/10.3390/jof9010093 - 8 Jan 2023
Cited by 8 | Viewed by 3458
Abstract
Peniophora is an old corticioid genus, from which two small satellite genera, Dendrophora and Duportella, were derived based on morphological differences. Molecular systematic studies showed that they belong to Peniophoraceae, Russulales, but the inter- and intra-generic phylogenetic relationships are still unclear. Moreover, [...] Read more.
Peniophora is an old corticioid genus, from which two small satellite genera, Dendrophora and Duportella, were derived based on morphological differences. Molecular systematic studies showed that they belong to Peniophoraceae, Russulales, but the inter- and intra-generic phylogenetic relationships are still unclear. Moreover, the species diversity of this group in subtropical and tropical Asia has not been sufficiently investigated and studied. In this study, we carried out an intensive taxonomic and phylogenetic study on Peniophora sensu lato based on analyses of concatenated ITS1-5.8S-ITS2 (ITS, Internal Transcribed Spacer) and 28S (D1–D2 domains of nuc 28S rDNA) sequence data of all available species worldwide. In the phylogenetic trees, species of Peniophora s. l. (sensu lato) including types of Peniophora s.s. (sensu stricto), Dendrophora and Duportella were interspersed within a strongly supported clade. It means that the morphological delimitations of the three genera are not reliable, and they should be regarded as a large genus. As a result, eight species of Duportella were transferred to Peniophora, although five of them have not been sequenced. Four new distinct lineages, corresponding to Peniophora cremicolor, P. major, P. shenghuae and P. vietnamensis spp. nov., were recovered in the trees. Peniophora taiwanensis is treated as a later synonym of P. malaiensis based on morphological and molecular evidence. Duportella renispora is excluded from Peniophoraceae, because BLAST results of the ITS and 28S sequences of the holotype showed that it is closely related to Amylostereum. Descriptions and illustrations are provided for the four new species, and an identification key is given for all 25 species of Peniophora in China. Our results indicated that the species diversity of the corticioid fungi in Asia is rich and deserves further study. Full article
(This article belongs to the Special Issue Phylogeny and Diversity of Forestry Fungi)
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17 pages, 5767 KiB  
Article
Screening of Antibacterial Activity of Some Resupinate Fungi, Reveal Gloeocystidiellum lojanense sp. nov. (Russulales) against E. coli from Ecuador
by Andrea Jaramillo-Riofrío, Cony Decock, Juan Pablo Suárez, Ángel Benítez, Gabriel Castillo and Darío Cruz
J. Fungi 2023, 9(1), 54; https://doi.org/10.3390/jof9010054 - 29 Dec 2022
Cited by 2 | Viewed by 3885
Abstract
Bacterial resistance to antibiotics is a serious public health problem that needs new antibacterial compounds for control. Fungi, including resupinated fungi, are a potential source to discover new bioactive compounds efficient again to bacteria resistant to antibiotics. The inhibitory capacity against the bacterial [...] Read more.
Bacterial resistance to antibiotics is a serious public health problem that needs new antibacterial compounds for control. Fungi, including resupinated fungi, are a potential source to discover new bioactive compounds efficient again to bacteria resistant to antibiotics. The inhibitory capacity against the bacterial species was statistically evaluated. All the species (basidiomata and strains) were molecularly characterized with the ITS1-5.8S-ITS2 barcoding marker. The strains Ceraceomyces sp., Fuscoporia sp., Gloeocystidiellum sp., Oliveonia sp., Phanerochaete sp., and Xenasmatella sp. correspond to resupinate Basidiomycetes, and only the strain Hypocrea sp. is an Ascomycete, suggesting contamination to the basidiome of Tulasnella sp. According to the antagonistic test, only the Gloeocystidiellum sp. strain had antibacterial activity against the bacterial species Escherichia coli of clinical interest. Statistically, Gloeocystidiellum sp. was significantly (<0.001) active against two E. coli pathotypes (O157:H7 and ATCC 25922). Contrarily, the antibacterial activity of fungi against other pathotypes of E. coli and other strains such as Serratia sp. was not significant. The antibacterial activity between 48 and 72 h increased according to the measurement of the inhibition halos. Because of this antibacterial activity, Gloeocystidiellum sp. was taxonomically studied in deep combined morphological and molecular characterization (ITS1-5.8S-ITS2; partial LSU D1/D2 of nrDNA). A new species Gloeocystidiellum lojanense, a resupinate and corticioid fungus from a tropical montane rainforest of southern Ecuador, with antibacterial potential against E. coli, is proposed to the science. Full article
(This article belongs to the Section Fungal Evolution, Biodiversity and Systematics)
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33 pages, 15116 KiB  
Article
Morphological Characteristics and Phylogeny Reveal Six New Species in Russula Subgenus Russula (Russulaceae, Russulales) from Yanshan Mountains, North China
by Hao Zhou, Gui-Qiang Cheng, Qiu-Tong Wang, Mei-Jun Guo, Lan Zhuo, Hui-Fang Yan, Guo-Jie Li and Cheng-Lin Hou
J. Fungi 2022, 8(12), 1283; https://doi.org/10.3390/jof8121283 - 7 Dec 2022
Cited by 15 | Viewed by 3540
Abstract
Species of the genus Russula are key components of ectomycorrhizal ecosystems worldwide, some of which are famous edible fungi. Although many new species have been described in China, their diversity in North China is still poorly known. Based on the morphology observation of [...] Read more.
Species of the genus Russula are key components of ectomycorrhizal ecosystems worldwide, some of which are famous edible fungi. Although many new species have been described in China, their diversity in North China is still poorly known. Based on the morphology observation of specimens and molecular phylogenetic analyses, combined with the current classification frame of Russula, six new species of Russula subgenus Russula are proposed from the Yanshan Mountains in northern Beijing and northern Hebei Province of China in this study: viz. Russula miyunensis (subsection Chamaeleontinae), R. plana (subsection Chamaeleontinae), R. sinoparva (subsection Puellarinae), R. sinorobusta (subsection Puellarinae), R. subversatilis (subsection Roseinae), and R. yanshanensis (subsection Puellarinae). This is the first report of the species of Russula subgenus Russula from the Yanshan Mountains. This study enriches the species diversity of Russula in North China and provides new data support for the systematic study of Russula in subsequent research, including research and development on edibility. Full article
(This article belongs to the Special Issue Edible and Medicinal Macrofungi)
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23 pages, 13078 KiB  
Article
Four New Wood-Inhabiting Fungal Species of Peniophoraceae (Russulales, Basidiomycota) from the Yunnan-Guizhou Plateau, China
by Lei Zou, Xiaolu Zhang, Yinglian Deng and Changlin Zhao
J. Fungi 2022, 8(11), 1227; https://doi.org/10.3390/jof8111227 - 21 Nov 2022
Cited by 13 | Viewed by 2537
Abstract
Four new fungi of the family Peniophoraceae, viz., Peniophora roseoalba, P. yunnanensis, Vararia daweishanensis, and V. fragilis are herein proposed, based on a combination of morphological features and molecular evidence. Peniophora roseoalba is characterized by resupinate, membranaceous basidiomata with a [...] Read more.
Four new fungi of the family Peniophoraceae, viz., Peniophora roseoalba, P. yunnanensis, Vararia daweishanensis, and V. fragilis are herein proposed, based on a combination of morphological features and molecular evidence. Peniophora roseoalba is characterized by resupinate, membranaceous basidiomata with a rose pink to pale pinkish grey hymenophore, a monomitic hyphal system with clamped generative hyphae, the presence of cystidia, and ellipsoid basidiospores. However, P. yunnanensis differs in being tuberculate, with a pale cream to cream hymenial surface, small lamprocystidia (18–29 × 4.5–7 µm), and subcylindrical basidiospores. Vararia daweishanensis is characterized by resupinate, membranous basidiomata with a pale yellowish hymenial surface, a dimitic hyphal system with clamped generative hyphae, strongly dextrinoid dichohyphae, and allantoid basidiospores; V. fragilis is characterized by resupinate, brittle basidiomata, with a buff to ochraceous hymenial surface and small ellipsoid basidiospores measuring 3.5–5.5 × 2.5–3.5 µm. Sequences of the ITS and nLSU rRNA markers of the studied samples were generated, and phylogenetic analyses were performed with the maximum likelihood, maximum parsimony, and Bayesian inference methods. The nLSU analysis revealed that the four new species can be clustered into the family Peniophoraceae (Russulales), in the genera Peniophora and Vararia. Further studies based on the ITS dataset showed that four fungi of the family Peniophoraceae were new to science. Full article
(This article belongs to the Special Issue Fungal Diversity in Various Environments)
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17 pages, 1774 KiB  
Article
Comparative Analysis of Peniophora lycii and Trametes hirsuta Exoproteomes Demonstrates “Shades of Gray” in the Concept of White-Rotting Fungi
by Alexander V. Shabaev, Konstantin V. Moiseenko, Olga A. Glazunova, Olga S. Savinova and Tatyana V. Fedorova
Int. J. Mol. Sci. 2022, 23(18), 10322; https://doi.org/10.3390/ijms231810322 - 7 Sep 2022
Cited by 16 | Viewed by 2374
Abstract
White-rot basidiomycete fungi are a unique group of organisms that evolved an unprecedented arsenal of extracellular enzymes for an efficient degradation of all components of wood such as cellulose, hemicelluloses and lignin. The exoproteomes of white-rot fungi represent a natural enzymatic toolbox for [...] Read more.
White-rot basidiomycete fungi are a unique group of organisms that evolved an unprecedented arsenal of extracellular enzymes for an efficient degradation of all components of wood such as cellulose, hemicelluloses and lignin. The exoproteomes of white-rot fungi represent a natural enzymatic toolbox for white biotechnology. Currently, only exoproteomes of a narrow taxonomic group of white-rot fungi—fungi belonging to the Polyporales order—are extensively studied. In this article, two white-rot fungi, Peniophora lycii LE-BIN 2142 from the Russulales order and Trametes hirsuta LE-BIN 072 from the Polyporales order, were compared and contrasted in terms of their enzymatic machinery used for degradation of different types of wood substrates—alder, birch and pine sawdust. Our findings suggested that the studied fungi use extremely different enzymatic systems for the degradation of carbohydrates and lignin. While T. hirsuta LE-BIN 072 behaved as a typical white-rot fungus, P. lycii LE-BIN 2142 demonstrated substantial peculiarities. Instead of using cellulolytic and hemicellulolytic hydrolytic enzymes, P. lycii LE-BIN 2142 primarily relies on oxidative polysaccharide-degrading enzymes such as LPMO and GMC oxidoreductase. Moreover, exoproteomes of P. lycii LE-BIN 2142 completely lacked ligninolytic peroxidases, a well-known marker of white-rot fungi, but instead contained several laccase isozymes and previously uncharacterized FAD-binding domain-containing proteins. Full article
(This article belongs to the Special Issue Proteomic Analysis of Microorganisms)
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