Search Results (4)

The growing interest in bio-inspired materials is driven by the need for increasingly targeted and efficient devices that also have a low ecological impact. These devices often use specially developed materials (e.g., polymers, aptamers, monoclonal antibodies) capable of carrying out the process of recognizing and capturing a specific target in a similar way to biomaterials of natural origin. In this article, we present two case studies, in which the target is a biomolecule of medical interest, in particular, α-thrombin and cytokine IL-6. In these examples, different biomaterials are compared to establish, with a theoretical-computational procedure known as proteotronics, which of them has the greatest potential for use in a biodevice. Full article

In the perspective of an increasing attention to ecological aspects of science and technology, it is of interest to design devices based on architectures of modular, low cost, and low-pollutant elements, each of them able to perform simple duties. Elemental devices may be themselves green as, for example, proteins able to make simple actions, like sensing. To this aim, photosensitive proteins are often considered because of the possibility of transferring their specific reaction to visible light into electronic signals. Here, we investigate the expected electrical response of the photoactive protein Reaction Center (bRC) of Rhodobacter Sphaeroides within the proteotronics, a recent branch of molecular electronics that evaluates the electrical properties of a protein by using an impedance network protein analog based on the protein tertiary structure and the degree of electrical connectivity between neighboring amino acids. To this purpose, the linear and nonlinear regimes of the electrical response to an applied bias are studied when the protein is in its native state or in an active state. In the linear response regime, results evidence a significant difference in the electrical properties of bRC when the pH value of the solution in which the protein is embedded changes from acid to basic. In the non-linear response regime, the current-voltage characteristics experimentally reported in the recent literature are interpreted in terms of a sequential tunneling mechanism of charge transfer. The qualitative agreement of present findings with available experiments strongly suggests the use of this protein as a bio-rheostat or a pH sensor. Full article

Cytokines are a family of proteins which play a major role in the regulation of the immune system and the development of several diseases, from rheumatoid arthritis to cancer and, more recently, COVID-19. Therefore, many efforts are currently being developed to improve therapy and diagnosis, as well as to produce inhibitory drugs and biosensors for a rapid, minimally invasive, and effective detection. In this regard, even more efficient cytokine receptors are under investigation. In this paper we analyze a set of IL-6 cytokine receptors, investigating their topological features by means of a theoretical approach. Our results suggest a topological indicator that may help in the identification of those receptors having the highest complementarity with the protein, a feature expected to ensure a stable binding. Furthermore, we propose and discuss the use of these receptors in an idealized experimental setup. Full article

Aptamers are strands of DNA or RNA molecules, chemically synthetized and able to bind a wide range of targets, from small molecules to live cells, and even tissues, with high affinity and specificity. Due to their efficient targeting ability, they have many different kinds of applications. Particularly attractive is their use in biotechnology and disease therapy, in substitution of antibodies. They represent a promising way for early diagnosis (aptasensors), but also for delivering imaging agents and drugs and for inhibiting specific proteins (therapeutic aptamers). Starting by briefly reviewing the most recent literature concerning advances in biomedical applications of aptamers and aptasensors, the focus is on the issues of a theoretical/computational framework (proteotronics) for modelling the electrical properties of biomolecules. Some recent results of proteotronics concerning the electrical, topological and affinity properties of aptamers are reviewed. Full article