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Keywords = Km,n-complement

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11 pages, 288 KiB  
Article
The Generalized Characteristic Polynomial of the Km,n-Complement of a Bipartite Graph
by Weiliang Zhao and Helin Gong
Symmetry 2025, 17(3), 328; https://doi.org/10.3390/sym17030328 - 21 Feb 2025
Viewed by 541
Abstract
The generalized matrix of a graph G is defined as M(G)=A(G)tD(G) (tR, and A(G) and D(G), respectively, denote [...] Read more.
The generalized matrix of a graph G is defined as M(G)=A(G)tD(G) (tR, and A(G) and D(G), respectively, denote the adjacency matrix and the degree matrix of G), and the generalized characteristic polynomial of G is merely the characteristic polynomial of M(G). Let Km,n be the complete bipartite graph. Then, the Km,n-complement of a subgraph G in Km,n is defined as the graph obtained by removing all edges of an isomorphic copy of G from Km,n. In this paper, by using a determinant expansion on the sum of two matrices (one of which is a diagonal matrix), a general method for computing the generalized characteristic polynomial of the Km,n-complement of a bipartite subgraph G is provided. Furthermore, when G is a graph with rank no more than 4, the explicit formula for the generalized characteristic polynomial of the Km,n-complements of G is given. Full article
(This article belongs to the Special Issue Advances in Graph Theory Ⅱ)
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14 pages, 1053 KiB  
Article
N-Carbamoylputrescine Amidohydrolase of Bacteroides thetaiotaomicron, a Dominant Species of the Human Gut Microbiota
by Hiromi Shimokawa, Mikiyasu Sakanaka, Yuki Fujisawa, Hirokazu Ohta, Yuta Sugiyama and Shin Kurihara
Biomedicines 2023, 11(4), 1123; https://doi.org/10.3390/biomedicines11041123 - 7 Apr 2023
Cited by 7 | Viewed by 2927
Abstract
Polyamines are bioactive amines that play a variety of roles, such as promoting cell proliferation and protein synthesis, and the intestinal lumen contains up to several mM polyamines derived from the gut microbiota. In the present study, we conducted genetic and biochemical analyses [...] Read more.
Polyamines are bioactive amines that play a variety of roles, such as promoting cell proliferation and protein synthesis, and the intestinal lumen contains up to several mM polyamines derived from the gut microbiota. In the present study, we conducted genetic and biochemical analyses of the polyamine biosynthetic enzyme N-carbamoylputrescine amidohydrolase (NCPAH) that converts N-carbamoylputrescine to putrescine, a precursor of spermidine in Bacteroides thetaiotaomicron, which is one of the most dominant species in the human gut microbiota. First, ncpah gene deletion and complemented strains were generated, and the intracellular polyamines of these strains cultured in a polyamine-free minimal medium were analyzed using high-performance liquid chromatography. The results showed that spermidine detected in the parental and complemented strains was depleted in the gene deletion strain. Next, purified NCPAH-(His)6 was analyzed for enzymatic activity and found to be capable of converting N-carbamoylputrescine to putrescine, with a Michaelis constant (Km) and turnover number (kcat) of 730 µM and 0.8 s−1, respectively. Furthermore, the NCPAH activity was strongly (>80%) inhibited by agmatine and spermidine, and moderately (≈50%) inhibited by putrescine. This feedback inhibition regulates the reaction catalyzed by NCPAH and may play a role in intracellular polyamine homeostasis in B. thetaiotaomicron. Full article
(This article belongs to the Special Issue The Role of Polyamines in Human Health and Disease)
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12 pages, 3107 KiB  
Article
Overlap and Segregation among Multiple 3D Home Ranges: A Non-Pairwise Metric with Demonstrative Application to the Lesser Kestrel Falco naumanni
by Alessandro Ferrarini, Giuseppe Giglio, Stefania Caterina Pellegrino and Marco Gustin
Biology 2023, 12(1), 77; https://doi.org/10.3390/biology12010077 - 2 Jan 2023
Cited by 4 | Viewed by 2229
Abstract
In this study we solved the issue of measuring the degree of overlap/segregation among an arbitrarily large number (n ≥ 2) of 3D volumetric home ranges (i.e., x, y, and hg; where hg is height above ground [...] Read more.
In this study we solved the issue of measuring the degree of overlap/segregation among an arbitrarily large number (n ≥ 2) of 3D volumetric home ranges (i.e., x, y, and hg; where hg is height above ground level) for the first time. For this purpose, we introduced the novel non-pairwise index MVOI (Multiple Volumetric Overlap Index) and its complement to 100 MVSI (Multiple Volumetric Segregation Index). Regardless of the number of 3D volumetric home ranges, the MVOI and MVSI generate a single score of overlap/segregation between 0 and 100, making ecological interpretation much easier and more meaningful when compared to n × n pairwise overlap indices. As a case study, we applied the MVOI and MVSI to 12,081 GPS points of five lesser kestrels (Falco naumanni) during the nesting period at Santeramo in Colle (Apulia region; Italy) in an area with the most elevated density of lesser kestrels in urban colonies worldwide. The 3D volumetric home ranges ranged between 1.79 km3 and 8.19 km3. We found that the tracked birds had different vertical profiles, possibly to limit intraspecific competition, resulting in a 3D home range overlap that was only 61.1% of the 2D overlap and 52.8% of the probabilistic one. Full article
(This article belongs to the Special Issue 3D and 4D Animal Space Use and Overlap)
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6 pages, 324 KiB  
Article
Universal Nuclear Equation of State Introducing the Hypothetical X17 Boson
by Martin Veselský, Vlasios Petousis, Jozef Leja and Laura Navarro
Symmetry 2023, 15(1), 49; https://doi.org/10.3390/sym15010049 - 24 Dec 2022
Cited by 4 | Viewed by 1775
Abstract
Within the scope of the Symmetry journal special issue on: “The Nuclear Physics of Neutron Stars”, we complemented the nuclear equation of state (EoS) with a hypothetical 17 MeV boson and observed that only instances with an admixture of 30%–40% satisfy all of [...] Read more.
Within the scope of the Symmetry journal special issue on: “The Nuclear Physics of Neutron Stars”, we complemented the nuclear equation of state (EoS) with a hypothetical 17 MeV boson and observed that only instances with an admixture of 30%–40% satisfy all of the constraints. The successful EoS resulted in a radius of around 13 km for a neutron star with mass MNS1.4M and in a maximum mass of around MNS2.5M. The value of the radius is in agreement with the recent measurement by NICER. The maximum mass is also in agreement with the mass of the remnant of the gravitational wave event GW190814. Thus, it appears that these EoSs satisfy all of the existing experimental constraints and can be considered as universal nuclear equations of state. Full article
(This article belongs to the Special Issue The Nuclear Physics of Neutron Stars)
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23 pages, 4575 KiB  
Article
Soil Moisture Estimation Synergy Using GNSS-R and L-Band Microwave Radiometry Data from FSSCat/FMPL-2
by Joan Francesc Munoz-Martin, David Llaveria, Christoph Herbert, Miriam Pablos, Hyuk Park and Adriano Camps
Remote Sens. 2021, 13(5), 994; https://doi.org/10.3390/rs13050994 - 5 Mar 2021
Cited by 29 | Viewed by 5127
Abstract
The Federated Satellite System mission (FSSCat) was the winner of the 2017 Copernicus Masters Competition and the first Copernicus third-party mission based on CubeSats. One of FSSCat’s objectives is to provide coarse Soil Moisture (SM) estimations by means of passive microwave measurements collected [...] Read more.
The Federated Satellite System mission (FSSCat) was the winner of the 2017 Copernicus Masters Competition and the first Copernicus third-party mission based on CubeSats. One of FSSCat’s objectives is to provide coarse Soil Moisture (SM) estimations by means of passive microwave measurements collected by Flexible Microwave Payload-2 (FMPL-2). This payload is a novel CubeSat based instrument combining an L1/E1 Global Navigation Satellite Systems-Reflectometer (GNSS-R) and an L-band Microwave Radiometer (MWR) using software-defined radio. This work presents the first results over land of the first two months of operations after the commissioning phase, from 1 October to 4 December 2020. Four neural network algorithms are implemented and analyzed in terms of different sets of input features to yield maps of SM content over the Northern Hemisphere (latitudes above 45° N). The first algorithm uses the surface skin temperature from the European Centre of Medium-Range Weather Forecast (ECMWF) in conjunction with the 16 day averaged Normalized Difference Vegetation Index (NDVI) from the Moderate Resolution Imaging Spectroradiometer (MODIS) to estimate SM and to use it as a comparison dataset for evaluating the additional models. A second approach is implemented to retrieve SM, which complements the first model using FMPL-2 L-band MWR antenna temperature measurements, showing a better performance than in the first case. The error standard deviation of this model referred to the Soil Moisture and Ocean Salinity (SMOS) SM product gridded at 36 km is 0.074 m3/m3. The third algorithm proposes a new approach to retrieve SM using FMPL-2 GNSS-R data. The mean and standard deviation of the GNSS-R reflectivity are obtained by averaging consecutive observations based on a sliding window and are further included as additional input features to the network. The model output shows an accurate SM estimation compared to a 9 km SMOS SM product, with an error of 0.087 m3/m3. Finally, a fourth model combines MWR and GNSS-R data and outperforms the previous approaches, with an error of just 0.063 m3/m3. These results demonstrate the capabilities of FMPL-2 to provide SM estimates over land with a good agreement with respect to SMOS SM. Full article
(This article belongs to the Special Issue Applications of GNSS Reflectometry for Earth Observation II)
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21 pages, 9050 KiB  
Article
Evaluation of Arctic Water Vapor Profile Observations from a Differential Absorption Lidar
by Zen Mariani, Shannon Hicks-Jalali, Kevin Strawbridge, Jack Gwozdecky, Robert W. Crawford, Barbara Casati, François Lemay, Raisa Lehtinen and Pekko Tuominen
Remote Sens. 2021, 13(4), 551; https://doi.org/10.3390/rs13040551 - 4 Feb 2021
Cited by 9 | Viewed by 3149
Abstract
The continuous measuring of the vertical profile of water vapor in the boundary layer using a commercially available differential absorption lidar (DIAL) has only recently been made possible. Since September 2018, a new pre-production version of the Vaisala DIAL system has operated at [...] Read more.
The continuous measuring of the vertical profile of water vapor in the boundary layer using a commercially available differential absorption lidar (DIAL) has only recently been made possible. Since September 2018, a new pre-production version of the Vaisala DIAL system has operated at the Iqaluit supersite (63.74°N, 68.51°W), commissioned by Environment and Climate Change Canada (ECCC) as part of the Canadian Arctic Weather Science project. This study presents its evaluation during the extremely dry conditions experienced in the Arctic by comparing it with coincident radiosonde and Raman lidar observations. Comparisons over a one year period were strongly correlated (r > 0.8 at almost all heights) and exhibited an average bias of +0.13 ± 0.01 g/kg (DIAL-sonde) and +0.18 ± 0.02 g/kg (DIAL-Raman). Larger differences exhibiting distinct artifacts were found between 250 and 400 m above ground level (AGL). The DIAL’s observations were also used to conduct a verification case study of operational numerical weather prediction (NWP) models during the World Meteorological Organization’s Year of Polar Prediction. Comparisons to ECCC’s global environmental multiscale model (GEM-2.5 km and GEM-10 km) indicate good agreement with an average bias < 0.16 g/kg for the higher-resolution (GEM-2.5 km) models. All models performed significantly better during the winter than the summer, likely due to the winter’s lower water vapor concentrations and decreased variability. This study provides evidence in favor of using high temporal resolution lidar water vapor profile measurements to complement radiosonde observations and for NWP model verification and process studies. Full article
(This article belongs to the Section Atmospheric Remote Sensing)
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17 pages, 4490 KiB  
Article
A Prospective Study of the Exploitation of Pelagic Sargassum spp. as a Solid Biofuel Energy Source
by Luis Bernardo López-Sosa, José Juan Alvarado-Flores, Juan Carlos Corral-Huacuz, Arturo Aguilera-Mandujano, Rosa E. Rodríguez-Martínez, Santiago José Guevara-Martínez, Jorge Víctor Alcaraz-Vera, José Guadalupe Rutiaga-Quiñones, Juan Zárate-Medina, María Liliana Ávalos-Rodríguez and Mario Morales-Máximo
Appl. Sci. 2020, 10(23), 8706; https://doi.org/10.3390/app10238706 - 4 Dec 2020
Cited by 33 | Viewed by 5936
Abstract
This study presents a prospective study for the potential exploitation of pelagic Sargassum spp. as a solid biofuel energy source. It was carried out in three stages. First we conducted a morphological, physical-chemical, and structural characterization using scanning electron microscopy (SEM), infrared spectroscopy [...] Read more.
This study presents a prospective study for the potential exploitation of pelagic Sargassum spp. as a solid biofuel energy source. It was carried out in three stages. First we conducted a morphological, physical-chemical, and structural characterization using scanning electron microscopy (SEM), infrared spectroscopy (FTIR), and X-ray diffraction (DRX), respectively. Second we evaluated the material’s functional properties as a solid biofuel based on its calorific value and the quantification of polymeric components like hemicellulose, cellulose, and lignin, as well as thermogravimetric and differential analysis to study the kinetics of its pyrolysis and determine parameters like activation energy (Ea), reaction order (n), and the pre-exponential factor (Z). Third we analyzed the energetic potential considering the estimated volume of pelagic Sargassum spp. that was removed from beaches along the Mexican Caribbean coast in recent years. Results of the kinetic study indicate that Sargassum spp. has an enormous potential for use as a complement to other bioenergy sources. Other results show the high potential for exploiting these algae as an energy source due to the huge volumes that have inundated Caribbean, West African, and northern Brazil shorelines in recent years. As a solid biofuel, Sargassum spp. has a potential energy the order of 0.203 gigajoules (GJ)/m3. In the energy matrix of the residential sector in Mexico, its potential use as an energy source is comparable to the national consumption of firewood. The volume of beachcast Sargassum spp. that was removed from ~8 km of coastline around Puerto Morelos, Mexico in 2018–2019, could have generated over 40 terajoules/year of solid biofuel. Full article
(This article belongs to the Special Issue Biomass Energy Utilization Systems)
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17 pages, 2225 KiB  
Article
Proteomics-Based Detection of Immune Dysfunction in an Elite Adventure Athlete Trekking Across the Antarctica
by David C. Nieman, Arnoud J. Groen, Artyom Pugachev, Andrew J. Simonson, Kristine Polley, Karma James, Bassem F. El-Khodor, Saradhadevi Varadharaj and Claudia Hernández-Armenta
Proteomes 2020, 8(1), 4; https://doi.org/10.3390/proteomes8010004 - 3 Mar 2020
Cited by 17 | Viewed by 9724
Abstract
Proteomics monitoring of an elite adventure athlete (age 33 years) was conducted over a 28-week period that culminated in the successful, solo, unassisted, and unsupported two month trek across the Antarctica (1500 km). Training distress was monitored weekly using a 19-item, validated training [...] Read more.
Proteomics monitoring of an elite adventure athlete (age 33 years) was conducted over a 28-week period that culminated in the successful, solo, unassisted, and unsupported two month trek across the Antarctica (1500 km). Training distress was monitored weekly using a 19-item, validated training distress scale (TDS). Weekly dried blood spot (DBS) specimens were collected via fingerprick blood drops onto standard blood spot cards. DBS proteins were measured with nano-electrospray ionization liquid chromatography tandem mass spectrometry (nanoLC-MS/MS) in data-independent acquisition (DIA) mode, and 712 proteins were identified and quantified. The 28-week period was divided into time segments based on TDS scores, and a contrast analysis between weeks five and eight (low TDS) and between weeks 20 and 23 (high TDS, last month of Antarctica trek) showed that 31 proteins (n = 20 immune related) were upregulated and 35 (n = 17 immune related) were downregulated. Protein–protein interaction (PPI) networks supported a dichotomous immune response. Gene ontology (GO) biological process terms for the upregulated immune proteins showed an increase in regulation of the immune system process, especially inflammation, complement activation, and leukocyte mediated immunity. At the same time, GO terms for the downregulated immune-related proteins indicated a decrease in several aspects of the overall immune system process including neutrophil degranulation and the antimicrobial humoral response. These proteomics data support a dysfunctional immune response in an elite adventure athlete during a sustained period of mental and physical distress while trekking solo across the Antarctica. Full article
(This article belongs to the Special Issue Human Proteomics)
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9 pages, 359 KiB  
Article
Train Like You Compete? Physical and Physiological Responses on Semi-Professional Soccer Players
by Alfonso Castillo-Rodríguez, Francisco Javier Cano-Cáceres, António Figueiredo and José Carlos Fernández-García
Int. J. Environ. Res. Public Health 2020, 17(3), 756; https://doi.org/10.3390/ijerph17030756 - 24 Jan 2020
Cited by 26 | Viewed by 4233
Abstract
Background: Decision-making in soccer has repercussions and depends on the environment of training or competition. The demands on the players can reveal if the decision-making is similar or different from that required during competition. Objectives: The aim of this study was to assess [...] Read more.
Background: Decision-making in soccer has repercussions and depends on the environment of training or competition. The demands on the players can reveal if the decision-making is similar or different from that required during competition. Objectives: The aim of this study was to assess the physical and physiological responses of players in training matches (TM) and official competition matches (CM) according to the playing position (external defenders, internal defenders, midfielders, and forwards/extremes). Methods: Twenty semi-professional male soccer players and 10 CM (n = 40) and 10 TM (n = 40) were studied using global positioning system technology, and paired and one-way ANOVA tests were carried out to compare physical (distances and number of sprints) and physiological (heart rates) responses with the factors a) match environments (TM and CM) and b) the playing position, respectively. Results: The results revealed that during CM, players covered higher total distance, partial distances, and sprints at different speeds (0–21 km/h) and produced higher physiological responses. Midfielders covered the greatest total distance in both TM (7227.6 m) and CM (11,225.9 m), in comparison to the other playing positions. However, forwards and extremes spent more time (56.8% of the CM [d = 0.78]) at 76% to 84% of their maximal heart rates. Conclusions: First, the physical and physiological responses in TM were significantly lower than in CM. Second, these responses were different according to the playing position, so this study was able to verify the exact amount of variation between the load produced in TM and CM. These results will help the coach and technical staff to design training tasks to complement the responses found in TM. Full article
20 pages, 5547 KiB  
Article
A Multi-Year Evaluation of Doppler Lidar Wind-Profile Observations in the Arctic
by Zen Mariani, Robert Crawford, Barbara Casati and François Lemay
Remote Sens. 2020, 12(2), 323; https://doi.org/10.3390/rs12020323 - 18 Jan 2020
Cited by 15 | Viewed by 4849
Abstract
Doppler light detection and ranging (lidar) wind profilers have proven their capability to measure vertical wind profiles with an accuracy comparable to anemometers and radiosondes. However, most of these comparisons were performed over short time periods or at mid-latitudes. This study presents a [...] Read more.
Doppler light detection and ranging (lidar) wind profilers have proven their capability to measure vertical wind profiles with an accuracy comparable to anemometers and radiosondes. However, most of these comparisons were performed over short time periods or at mid-latitudes. This study presents a multi-year assessment of the accuracy of Doppler lidar wind-profile measurements in the Arctic by comparing them with coincident radiosonde observations, and excellent agreement was observed. The suitability of the Doppler lidar for verification case studies of operational numerical weather prediction (NWP) models during the World Meteorological Organization’s Year of Polar Prediction is also demonstrated, by using Environment and Climate Change Canada’s (ECCC) global environmental multiscale model (GEM-2.5 km and GEM-10 km). Since 2016, identical scanning Doppler lidars were deployed at two supersites commissioned by ECCC as part of the Canadian Arctic Weather Science project. The supersites are located in Iqaluit (64°N, 69°W) and Whitehorse (61°N, 135°W) with a third Halo Doppler lidar located in Squamish (50°N, 123°W). Two lidar wind-profile measurement methodologies were investigated; the velocity-azimuth display method exhibited a smaller average bias (−0.27 ± 0.02 m/s) than the Doppler beam-swinging method (–0.46 ± 0.02 m/s) compared to the sonde. Comparisons to ECCC’s NWP models indicate good agreement, more so during the summer months, with an average bias < 0.71 m/s for the higher-resolution (GEM-2.5 km) ECCC models at Iqaluit. Larger biases were found in the mountainous terrain of Whitehorse and Squamish, likely due to difficulties in the model’s ability to resolve the topography. This provides evidence in favor of using high temporal resolution lidar wind-profile measurements to complement radiosonde observations and for NWP model verification and process studies. Full article
(This article belongs to the Special Issue Advances in Atmospheric Remote Sensing with Lidar)
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