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Keywords = Jackknife replication method

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16 pages, 255 KB  
Article
Wearable Device Adoption, Physical Activity, and Health Data Sharing Among U.S. Cancer Survivors: Evidence from HINTS-7
by Zarmina Amin, Jessh Mavoungou, John Oginni and Zan Gao
J. Clin. Med. 2026, 15(10), 3984; https://doi.org/10.3390/jcm15103984 - 21 May 2026
Viewed by 359
Abstract
Background/Objectives: Wearable devices are increasingly used to support physical activity (PA), yet national patterns of use and their relationship with PA among cancer survivors remain unclear. Integration of wearable data into clinical care is also poorly understood. This study examined wearable use, its [...] Read more.
Background/Objectives: Wearable devices are increasingly used to support physical activity (PA), yet national patterns of use and their relationship with PA among cancer survivors remain unclear. Integration of wearable data into clinical care is also poorly understood. This study examined wearable use, its association with meeting PA guidelines, and health data-sharing with providers among U.S. adults with and without cancer. Methods: A cross-sectional analysis of the Health Information National Trends Survey (HINTS-7), a nationally representative survey of U.S. adults, was conducted. Survey weights and jackknife replication methods generated population-level estimates. Wearable use (yes/no), meeting PA guidelines (≥150 min/week moderate activity), and data-sharing behaviors were assessed. Weighted logistic regression evaluated associations between wearable use and meeting PA guidelines, including interaction by cancer history. Analyses also examined willingness to share and actual data-sharing. Results: The sample included 6084 U.S. adults. Wearable use was lower among cancer survivors (34.0%) than those without cancer (41.4%). Individuals using wearable devices were more likely to meet PA guidelines (ORs: 1.79–1.97), with the association being stronger among cancer survivors. Among cancer-surviving wearable users, willingness to share data with providers was high (77.5%), but actual sharing was substantially lower (35.4%). Few predictors of willingness were identified. Conclusions: Wearable use is associated with meeting PA guidelines at the population level, with potential relevance for cancer survivors. However, despite high willingness to share data, clinical integration remains limited, highlighting a gap between digital engagement and healthcare use. Strategies to improve integration of patient-generated data into care are needed. Full article
(This article belongs to the Section Sports Medicine)
15 pages, 1593 KB  
Article
Influence of Sampling Effort and Taxonomic Resolution on Benthic Macroinvertebrate Taxa Richness and Bioassessment in a Non-Wadable Hard-Bottom River (China)
by Jiaxuan Liu, Hongjia Shan, Chengxing Xia and Sen Ding
Biology 2025, 14(10), 1444; https://doi.org/10.3390/biology14101444 - 20 Oct 2025
Cited by 1 | Viewed by 996
Abstract
Benthic macroinvertebrates are widely used for river ecosystem health monitoring, yet challenges remain in non-wadable rivers, particularly regarding sampling effort. We evaluated hand-net sampling efficiency at three sites along the Danjiang River (a Yangtze River tributary) by analyzing taxa richness across taxonomic levels [...] Read more.
Benthic macroinvertebrates are widely used for river ecosystem health monitoring, yet challenges remain in non-wadable rivers, particularly regarding sampling effort. We evaluated hand-net sampling efficiency at three sites along the Danjiang River (a Yangtze River tributary) by analyzing taxa richness across taxonomic levels under varying replicate numbers. In total, 61 taxa (41 families) of benthic macroinvertebrates were identified. Non-metric multidimensional scaling analysis indicated no significant spatiotemporal variation in community composition. However, sampling effort increased, and the benthic macroinvertebrate taxa richness at both genus/species and family levels also increased. At eight sample replicates, the taxa accumulation curve at the genus/species level did not show an asymptote, with the observed richness reaching 67–80% of the predicted values calculated by Jackknife 1. In contrast, the family-level curve exhibited a clear asymptotic trend, with the observed richness reaching 82–100% of the predicted values. As sampling effort increased, bias decreased and accuracy improved, particularly for family-level taxa. Additionally, the BMWP scores also increased with the sampling effort. When the replicate number was no less than six, the BMWP reached stable assessment grades for all cases. From the perspective of bioassessment in non-wadable rivers, the hand net is suitable for collecting benthic macroinvertebrates. However, there is a risk of underestimating taxa richness due to insufficient sampling effort. Using family-level taxa can partially mitigate the impacts caused by insufficient sampling efforts to a certain extent, but further validation is needed for other non-wadable rivers (e.g., those with soft substrates). In conclusion, our research results indicate that six replicate hand-net samplings in non-wadable hard-bottom rivers can be regarded as a cost-effective and reliable sampling method for benthic macroinvertebrate BMWP assessment. This strategy provides a relatively practical reference for the monitoring of benthic macroinvertebrate in the same type of rivers in China. Full article
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15 pages, 311 KB  
Article
Viral Quasispecies Inference from Single Observations—Mutagens as Accelerators of Quasispecies Evolution
by Josep Gregori, Miquel Salicrú, Marta Ibáñez-Lligoña, Sergi Colomer-Castell, Carolina Campos, Alvaro González-Camuesco and Josep Quer
Microorganisms 2025, 13(9), 2029; https://doi.org/10.3390/microorganisms13092029 - 30 Aug 2025
Cited by 1 | Viewed by 1540
Abstract
RNA virus populations exist as quasispecies-complex, dynamic clouds of closely related but genetically diverse variants generated by high mutation rates during replication. Assessing quasispecies structure and diversity is crucial for understanding viral evolution, adaptation, and response to antiviral treatments. However, comparing single quasispecies [...] Read more.
RNA virus populations exist as quasispecies-complex, dynamic clouds of closely related but genetically diverse variants generated by high mutation rates during replication. Assessing quasispecies structure and diversity is crucial for understanding viral evolution, adaptation, and response to antiviral treatments. However, comparing single quasispecies observations from individual biosamples, especially at different infection or treatment time points, presents statistical challenges. Traditional inferential tests are inapplicable due to the lack of replicate observations, and resampling-based approaches such as the bootstrap and jackknife are limited by biases and non-independence, particularly for diversity indices sensitive to rare haplotypes. In this study, we address these limitations by applying the delta method to derive analytical variances for a set of quasispecies structure indicators specifically designed to assess the quasispecies maturation state. We demonstrate the utility of this approach using high-depth next-generation sequencing data from hepatitis C virus (HCV) quasispecies evolving in vitro under various conditions, including free evolution and exposure to antiviral or mutagenic treatments. Our results reveal that with highly fit HCV quasispecies, sofosbuvir inhibits quasispecies genetic diversity, while mutagenic treatments accelerate maturation, compared to untreated controls. We emphasize the interpretation of results through absolute differences, log-fold changes, and standardized effect sizes, moving beyond mere statistical significance. This framework enables robust, quantitative comparisons of quasispecies diversity from single observations, providing valuable insights into viral adaptation and treatment response. The R code and session info with required libraries and versions is provided in the supplementary material. Full article
(This article belongs to the Special Issue Bioinformatics Research on Viruses)
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22 pages, 4222 KB  
Article
Occurrence Regionalization of Kiwifruit Brown Spot in Sichuan
by Yuhang Zhu, Kaikai Yao, Miaomiao Ma, Yongliang Cui, Jing Xu, Wen Chen, Rui Yang, Cuiping Wu and Guoshu Gong
J. Fungi 2023, 9(9), 899; https://doi.org/10.3390/jof9090899 - 31 Aug 2023
Cited by 6 | Viewed by 2389
Abstract
Kiwifruit brown spot caused by Corynespora cassiicola is the most significant fungal disease in Sichuan, resulting in premature defoliation, which had a significant impact on yield and fruit quality. The objective of the study was to determine the occurrence regularity and suitability of [...] Read more.
Kiwifruit brown spot caused by Corynespora cassiicola is the most significant fungal disease in Sichuan, resulting in premature defoliation, which had a significant impact on yield and fruit quality. The objective of the study was to determine the occurrence regularity and suitability of kiwifruit brown spot in Sichuan. The occurrence of the disease in the main producing region was continuously monitored, the maximum entropy (MaxEnt) model was used to predict its potential distribution, and the key environmental variables were identified using the jackknife method. The results indicated that kiwifruit brown spot was widely distributed across the entire producing region in Sichuan, predominantly affecting the variety “Hongyang”. The incidence (p < 0.01) and disease index (p < 0.05) showed a significant positive correlation with the cultivar, and decreased with the altitude increasing. The average area under the ROC curve (AUC) of 10 replicates was 0.933 ± 0.012, with an accuracy of 84.44% in a field test, confirming the reliability of the predicted results. The highly suitable distribution areas of kiwifruit brown spot were mainly located in the Chengdu and Ya’an regions. The entire Panzhihua region was an unsuitable distribution area, and the entire Pujiang County and Mingshan District were highly suitable distribution areas. The key environmental variables affecting the potential distribution of kiwifruit brown spot included isothermality (24.3–33.7%), minimum temperature in August (16.3–23.6 °C), maximum temperature in July (25.5–31.2 °C), minimum temperature in June (15.6–20.9 °C), precipitation in August (158–430 mm), and average temperature in October (15.6–18.8 °C). This study provides a theoretical basis for the reasonable layout of the cultivar and the precise prevention and control of the disease. Full article
(This article belongs to the Special Issue Modeling, Warning and Management Strategies of Crop Fungal Disease)
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19 pages, 10421 KB  
Article
Measuring Uncertainty for Poverty Indicators at Regional Level: The Case of Mediterranean Countries
by Ilaria Benedetti, Federico Crescenzi and Tiziana Laureti
Sustainability 2020, 12(19), 8159; https://doi.org/10.3390/su12198159 - 2 Oct 2020
Cited by 9 | Viewed by 3103
Abstract
Over the last years, there has been an increased interest in compiling poverty indicators as well as in providing uncertainty measures both at national and regional level. In this paper, we provide point and variance estimates of two widely used income-poverty indicators, which [...] Read more.
Over the last years, there has been an increased interest in compiling poverty indicators as well as in providing uncertainty measures both at national and regional level. In this paper, we provide point and variance estimates of two widely used income-poverty indicators, which belong to the class of the Foster-Greer-Thorbecke (FGT), and two widely used income-inequality indicators. We focused on Mediterranean countries since they have been severely hit by the Great Recession which increased poverty intensity and socio-economic inequalities. By using the 2018 EU-SILC data we analysed the spatial distribution of poverty by constructing maps at NUTS2 territorial level. Our estimation results reveal that national poverty indicators hide a high heterogeneity of poverty across regions within each country, especially for Italy and Spain. This study also provides computations of standard errors at regional level which have been explored only in a limited number of papers. To this aim we adopted the Jackknife replication method thanks to its convenient properties. As expected, the uncertainty measure is influenced by the reduced number of sampling units in each NUTS2 region especially in some regions of Spain and Italy. The Jackknife method proved to perform well in the case of income-inequality indicators especially for Greece, Italy, Croatia and Portugal. Full article
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