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Keywords = Burkholderia sensu stricto

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11 pages, 3099 KiB  
Article
Bioelectrochemical Purification of Biomass Polymer Derived Furfural Wastewater and Its Electric Energy Recovery
by Hailing Tian, Yue Quan, Zhenhao Yin, Chengri Yin and Yu Fu
Polymers 2023, 15(16), 3422; https://doi.org/10.3390/polym15163422 - 16 Aug 2023
Cited by 5 | Viewed by 1798
Abstract
With the increasing environmental pollution caused by waste polymers, the conversion of polymer components in biomass into valuable products is of great significance for waste management and resource recovery. A two-stage microbial fuel cell (MFC) was used to treat furfural wastewater in this [...] Read more.
With the increasing environmental pollution caused by waste polymers, the conversion of polymer components in biomass into valuable products is of great significance for waste management and resource recovery. A two-stage microbial fuel cell (MFC) was used to treat furfural wastewater in this study. The maximum output voltage was 240–250 mV and the power generation time in an operation cycle was 286 h. The degradation efficiency of furfural reached 99–100% (furfural concentration at 300–3000 mg/L) and was slightly reduced to 91% at 7000 mg/L. In addition, the BOD/COD ratio of the furfural wastewater increased from 0.31 to 0.48 after MFC processing. The molecular analysis of the anodic bacterial isolates indicated that the phylogenetic bacterial mixture was dominated by five active anaerobic bacteria with a similarity percentage above 99% for each strain: Burkholderia (B. burdella), Clostridium sensu stricto (Cymbidaceae), Klebsiella (Klebsiella), Ethanoligenens (anaerobic genus), and Acidocella (anaerobic genus); the mixture exhibited good properties to carry out bioelectricity generation in the microbial fuel cell. This indicates that the MFC has effectively degraded furfural for pollutant removal and power generation and is a promising clean method to treat furfural pollution in industry wastewater. Full article
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24 pages, 4105 KiB  
Review
Compilation of the Antimicrobial Compounds Produced by Burkholderia Sensu Stricto
by Mariana Rodríguez-Cisneros, Leslie Mariana Morales-Ruíz, Anuar Salazar-Gómez, Fernando Uriel Rojas-Rojas and Paulina Estrada-de los Santos
Molecules 2023, 28(4), 1646; https://doi.org/10.3390/molecules28041646 - 8 Feb 2023
Cited by 15 | Viewed by 5003
Abstract
Due to the increase in multidrug-resistant microorganisms, the investigation of novel or more efficient antimicrobial compounds is essential. The World Health Organization issued a list of priority multidrug-resistant bacteria whose eradication will require new antibiotics. Among them, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacteriaceae [...] Read more.
Due to the increase in multidrug-resistant microorganisms, the investigation of novel or more efficient antimicrobial compounds is essential. The World Health Organization issued a list of priority multidrug-resistant bacteria whose eradication will require new antibiotics. Among them, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacteriaceae are in the “critical” (most urgent) category. As a result, major investigations are ongoing worldwide to discover new antimicrobial compounds. Burkholderia, specifically Burkholderia sensu stricto, is recognized as an antimicrobial-producing group of species. Highly dissimilar compounds are among the molecules produced by this genus, such as those that are unique to a particular strain (like compound CF66I produced by Burkholderia cepacia CF-66) or antimicrobials found in a number of species, e.g., phenazines or ornibactins. The compounds produced by Burkholderia include N-containing heterocycles, volatile organic compounds, polyenes, polyynes, siderophores, macrolides, bacteriocins, quinolones, and other not classified antimicrobials. Some of them might be candidates not only for antimicrobials for both bacteria and fungi, but also as anticancer or antitumor agents. Therefore, in this review, the wide range of antimicrobial compounds produced by Burkholderia is explored, focusing especially on those compounds that were tested in vitro for antimicrobial activity. In addition, information was gathered regarding novel compounds discovered by genome-guided approaches. Full article
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19 pages, 579 KiB  
Article
Burkholderia Bacteria Produce Multiple Potentially Novel Molecules that Inhibit Carbapenem-Resistant Gram-Negative Bacterial Pathogens
by Eliza Depoorter, Evelien De Canck, Tom Coenye and Peter Vandamme
Antibiotics 2021, 10(2), 147; https://doi.org/10.3390/antibiotics10020147 - 2 Feb 2021
Cited by 19 | Viewed by 4690
Abstract
Antimicrobial resistance in Gram-negative pathogens represents a global threat to human health. This study determines the antimicrobial potential of a taxonomically and geographically diverse collection of 263 Burkholderia (sensu lato) isolates and applies natural product dereplication strategies to identify potentially novel molecules. Antimicrobial [...] Read more.
Antimicrobial resistance in Gram-negative pathogens represents a global threat to human health. This study determines the antimicrobial potential of a taxonomically and geographically diverse collection of 263 Burkholderia (sensu lato) isolates and applies natural product dereplication strategies to identify potentially novel molecules. Antimicrobial activity is almost exclusively present in Burkholderia sensu stricto bacteria and rarely observed in the novel genera Paraburkholderia, Caballeronia, Robbsia, Trinickia, and Mycetohabitans. Fourteen isolates show a unique spectrum of antimicrobial activity and inhibited carbapenem-resistant Gram-negative bacterial pathogens. Dereplication of the molecules present in crude spent agar extracts identifies 42 specialized metabolites, 19 of which represented potentially novel molecules. The known identified Burkholderia metabolites include toxoflavin, reumycin, pyrrolnitrin, enacyloxin, bactobolin, cepacidin, ditropolonyl sulfide, and antibiotics BN-227-F and SF 2420B, as well as the siderophores ornibactin, pyochelin, and cepabactin. Following semipreparative fractionation and activity testing, a total of five potentially novel molecules are detected in active fractions. Given the molecular formula and UV spectrum, two of those putative novel molecules are likely related to bactobolins, and another is likely related to enacyloxins. The results from this study confirm and extend the observation that Burkholderia bacteria present exciting opportunities for the discovery of potentially novel bioactive molecules. Full article
(This article belongs to the Section Novel Antimicrobial Agents)
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23 pages, 2707 KiB  
Article
Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
by Paulina Estrada-de los Santos, Marike Palmer, Belén Chávez-Ramírez, Chrizelle Beukes, Emma T. Steenkamp, Leah Briscoe, Noor Khan, Marta Maluk, Marcel Lafos, Ethan Humm, Monique Arrabit, Matthew Crook, Eduardo Gross, Marcelo F. Simon, Fábio Bueno Dos Reis Junior, William B. Whitman, Nicole Shapiro, Philip S. Poole, Ann M. Hirsch, Stephanus N. Venter and Euan K. Jamesadd Show full author list remove Hide full author list
Genes 2018, 9(8), 389; https://doi.org/10.3390/genes9080389 - 1 Aug 2018
Cited by 175 | Viewed by 19639
Abstract
Burkholderia sensu lato is a large and complex group, containing pathogenic, phytopathogenic, symbiotic and non-symbiotic strains from a very wide range of environmental (soil, water, plants, fungi) and clinical (animal, human) habitats. Its taxonomy has been evaluated several times through the analysis of [...] Read more.
Burkholderia sensu lato is a large and complex group, containing pathogenic, phytopathogenic, symbiotic and non-symbiotic strains from a very wide range of environmental (soil, water, plants, fungi) and clinical (animal, human) habitats. Its taxonomy has been evaluated several times through the analysis of 16S rRNA sequences, concantenated 4–7 housekeeping gene sequences, and lately by genome sequences. Currently, the division of this group into Burkholderia, Caballeronia, Paraburkholderia, and Robbsia is strongly supported by genome analysis. These new genera broadly correspond to the various habitats/lifestyles of Burkholderia s.l., e.g., all the plant beneficial and environmental (PBE) strains are included in Paraburkholderia (which also includes all the N2-fixing legume symbionts) and Caballeronia, while most of the human and animal pathogens are retained in Burkholderia sensu stricto. However, none of these genera can accommodate two important groups of species. One of these includes the closely related Paraburkholderia rhizoxinica and Paraburkholderia endofungorum, which are both symbionts of the fungal phytopathogen Rhizopus microsporus. The second group comprises the Mimosa-nodulating bacterium Paraburkholderia symbiotica, the phytopathogen Paraburkholderia caryophylli, and the soil bacteria Burkholderia dabaoshanensis and Paraburkholderia soli. In order to clarify their positions within Burkholderia sensu lato, a phylogenomic approach based on a maximum likelihood analysis of conserved genes from more than 100 Burkholderia sensu lato species was carried out. Additionally, the average nucleotide identity (ANI) and amino acid identity (AAI) were calculated. The data strongly supported the existence of two distinct and unique clades, which in fact sustain the description of two novel genera Mycetohabitans gen. nov. and Trinickia gen. nov. The newly proposed combinations are Mycetohabitans endofungorum comb. nov., Mycetohabitansrhizoxinica comb. nov., Trinickia caryophylli comb. nov., Trinickiadabaoshanensis comb. nov., Trinickia soli comb. nov., and Trinickiasymbiotica comb. nov. Given that the division between the genera that comprise Burkholderia s.l. in terms of their lifestyles is often complex, differential characteristics of the genomes of these new combinations were investigated. In addition, two important lifestyle-determining traits—diazotrophy and/or symbiotic nodulation, and pathogenesis—were analyzed in depth i.e., the phylogenetic positions of nitrogen fixation and nodulation genes in Trinickia via-à-vis other Burkholderiaceae were determined, and the possibility of pathogenesis in Mycetohabitans and Trinickia was tested by performing infection experiments on plants and the nematode Caenorhabditis elegans. It is concluded that (1) T. symbiotica nif and nod genes fit within the wider Mimosa-nodulating Burkholderiaceae but appear in separate clades and that T. caryophyllinif genes are basal to the free-living Burkholderia s.l. strains, while with regard to pathogenesis (2) none of the Mycetohabitans and Trinickia strains tested are likely to be pathogenic, except for the known phytopathogen T. caryophylli. Full article
(This article belongs to the Special Issue Genetics and Genomics of the Rhizobium-Legume Symbiosis)
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