Comparative Analysis of Oral Prevotella intermedia, Tannerella forsythia, Streptococcus sanguinis, and Streptococcus mutans in Patients with Esophageal Squamous Cell Carcinoma and Healthy Controls in Mthatha, South Africa
Abstract
:1. Introduction
2. Materials and Methods
2.1. Study Design and Population
2.2. Inclusion and Exclusion Criteria
2.3. Data Collection
2.4. Sample Collection
2.5. DNA Extraction and Quantification
2.6. Probe/Primer Sets for Real-Time PCR
2.7. Amplification of DNA Through Real-Time Polymerase Chain Reaction
2.8. Ethical Considerations
2.9. Statistical Analysis
3. Results
3.1. Sociodemographic Parameters of Study Population
3.2. Bacterial Expression and Quantification in ESCC Cases and Healthy Controls
3.3. Association Between Sociodemographic Characteristics and Bacterial Expression Levels of Selected Oral Bacteria in Healthy Controls and Patients with ESCC
4. Discussion
5. Conclusions
6. Limitations
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Bacteria | Primers and Probes |
---|---|
Streptococcus sanguinis | 5′-GTGTCAATTCCCAGAAAAG-3′ 54.0 5′-ATTATTGGCTGATGTGGAGTC-3′ 45.3 5′-HEX-AGATGACCACCACCGT-BHQ1-3′ 50.0 |
Streptococcus mutans | 5′-TCACCAGAAAAGACAAAAGTTAC-3′ 5′-AACTACTAACCAAGCCCAAC-3′ 5′-Cy5-TAGCCGCAGCAATCAATG-BHQ-3′ |
Prevotella intermedia | 5′-TCCACCGATGAATCTTTGGTC-3′ 5′-ATCCAACCTTCCCTCCACTC-3′ 5′-FAM-CGTCAGATGCCATATGTGGACAACATCG-TAMRA-3′ |
Tannerella forsythia | 5′-AGCGATGGTAGCAATACCTGTC-3′ 5′-TTCGCCGGGTTATCCCTC-3′ 5′-FAM-TGAGTAACGCGTATGTAAACCTGCCCGC-TAMRA-3′ |
Universal | 5′-TCCTACGGGAGGCAGCAGT-3′ 5′-GGACTACCAGGGTATCTAATCCTGTT-3′ 5′-FAM-CGTATTACCGCGGCTGCTGGCAC-TAMRA-3′ |
Parameters | Groups | Healthy Controls n = 24(%) | Cases (ESCC) n = 24(%) | p-Value |
---|---|---|---|---|
Age | Mean | 51.34 | 66.42 | / |
Gender | Female | 11 (45.83) | 13 (54.16) | 0.773 |
Male | 13 (54.16) | 11(45.83) | ||
Level of education | Primary | 1 (4.16) | 20 (83.33) | 0.000 |
Secondary | 23 (95.83) | 4 (16.66) | ||
Marital status | Single | 17 (70.83) | 19 (79.16) | 0.740 |
Married | 7 (29.16) | 5 (20.83) | ||
Teeth brushing | Once | 11 (45.83) | 14(58.33) | 0.772 |
≥2 | 13 (54.16) | 10 (41.66) | ||
Missing teeth | 0 | 7 (29.16)) | 4 (16.66) | 0.666 |
1–3 | 13 (54.16) | 16 (66.66) | ||
>3 | 4 (16.66) | 4 (16.66) | ||
Smoking status | Never | 20 (83.33) | 7 (29.16) | 0.000 |
Ever | 4 (16.66) | 17 (70.83) | ||
Alcohol consumption | Never | 12 (50) | 8 (33.33) | 0.380 |
Ever | 12 (50) | 16 (66.66) |
Parameters | Groups | S. mutans | S. sanguinis | P. intermedia | T. forsythia | ||||
---|---|---|---|---|---|---|---|---|---|
Log (Mean ± SD) | p-Value | Log (Mean ± SD) | p-Value | Log (Mean ± SD) | p-Value | Log (Mean ± SD) | p-Value | ||
Age | Mean | / | 0.000 | / | 0.009 | / | 0.131 | / | 0.367 |
Gender | Female | 1.25 ± 0.10 | 0.189 | 1.25 ± 0.13 | 0.076 | 0.89 ± 0.16 | 0.603 | 1.10 ± 0.13 | 0.248 |
Male | 1.22 ± 0.08 | 1.19 ± 0.12 | 0.86 ± 0.17 | 1.06 ± 0.11 | |||||
Education level | Primary | 1.30 ± 0.09 | 0.000 | 1.28 ± 0.12 | 0.004 | 0.92 ± 0.18 | 0.069 | 1.13 ± 0.12 | 0.014 |
Secondary | 1.19 ± 0.07 | 1.18 ± 0.13 | 0.84 ± 0.14 | 1.04 ± 0.10 | |||||
Marital status | Single | 1.24 ± 0.09 | 0.207 | 1.22 ± 0.13 | 0.825 | 0.88 ± 0.17 | 0.534 | 1.07 ± 0.12 | 0.275 |
Married | 1.20 ± 0.12 | 1.23 ± 0.14 | 0.85 ± 0.16 | 1.12 ± 0.13 | |||||
Teeth brushing | Once | 1.25 ± 0.09 | 0.279 | 0.86 ± 0.17 | 0.589 | 0.86 ± 0.17 | 0.589 | 1.10 ± 0.14 | 0.737 |
≥2 | 1.22 ± 0.10 | 0.89 ± 0.16 | 0.89 ± 0.16 | 1.07 ± 0.11 | |||||
Missing teeth | 0 | 1.24 ± 0.08 | 0.692 | 1.24 ± 0.11 | 0.643 | 0.92 ± 0.21 | 0.521 | 1.07 ± 0.11 | 0.777 |
1–3 | 1.23 ± 0.10 | 1.22 ± 0.14 | 0.86 ± 0.15 | 1.08 ± 0.13 | |||||
>3 | 1.21 ± 0.11 | 1.18 ± 0.12 | 0.87 ± 0.15 | 1.11 ± 0.12 | |||||
Smoking status | Never | 1.19 ± 0.08 | 0.000 | 1.19 ± 0.14 | 0.060 | 0.85 ± 0.17 | 0.317 | 1.05 ± 0.10 | 0.030 |
Ever | 1.30 ± 0.08 | 1.26 ± 0.11 | 0.90 ± 0.16 | 1.12 ± 0.13 | |||||
Alcohol consumption | Never | 1.21 ± 0.11 | 0.097 | 1.22 ± 0.15 | 0.974 | 0.88 ± 0.16 | 0.832 | 1.07 ± 0.10 | 0.724 |
Ever | 1.25 ± 0.08 | 1.22 ± 0.12 | 0.87 ± 0.17 | 1.09 ± 0.13 |
Tannerella forsythia | Streptococcus mutans | Streptococcus sanguinis | Prevotella intermedia | |||||
---|---|---|---|---|---|---|---|---|
Variable | Adjusted Coefficient (95% CI) | p-Value | Adjusted Coefficient (95% CI) | p-Value | Adjusted Coefficient (95% CI) | p-Value | Adjusted Coefficient (95% CI) | p-Value |
Age | / | / | −0.026 (−0.090–0.038) | 0.417 | −0.010 (−0.120–0.101) | 0.862 | / | / |
Education Level | −0.049 (−0.163–0.065) | 0.392 | −0.017 (−0.083–0.049) | 0.614 | −0.002 (−0.115–0.111) | 0.970 | / | / |
Smoking status | 0.044 (−0.038–0.127) | 0.283 | 0.043 (−0.005–0.090) | 0.076 | / | / | / | / |
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Nokamatye, Y.Y.; Kamsu, G.T.; Ndebia, E.J. Comparative Analysis of Oral Prevotella intermedia, Tannerella forsythia, Streptococcus sanguinis, and Streptococcus mutans in Patients with Esophageal Squamous Cell Carcinoma and Healthy Controls in Mthatha, South Africa. Bacteria 2025, 4, 11. https://doi.org/10.3390/bacteria4010011
Nokamatye YY, Kamsu GT, Ndebia EJ. Comparative Analysis of Oral Prevotella intermedia, Tannerella forsythia, Streptococcus sanguinis, and Streptococcus mutans in Patients with Esophageal Squamous Cell Carcinoma and Healthy Controls in Mthatha, South Africa. Bacteria. 2025; 4(1):11. https://doi.org/10.3390/bacteria4010011
Chicago/Turabian StyleNokamatye, Yolanda Yolisa, Gabriel Tchuente Kamsu, and Eugene Jamot Ndebia. 2025. "Comparative Analysis of Oral Prevotella intermedia, Tannerella forsythia, Streptococcus sanguinis, and Streptococcus mutans in Patients with Esophageal Squamous Cell Carcinoma and Healthy Controls in Mthatha, South Africa" Bacteria 4, no. 1: 11. https://doi.org/10.3390/bacteria4010011
APA StyleNokamatye, Y. Y., Kamsu, G. T., & Ndebia, E. J. (2025). Comparative Analysis of Oral Prevotella intermedia, Tannerella forsythia, Streptococcus sanguinis, and Streptococcus mutans in Patients with Esophageal Squamous Cell Carcinoma and Healthy Controls in Mthatha, South Africa. Bacteria, 4(1), 11. https://doi.org/10.3390/bacteria4010011