Physiological and Genomic Characterization of Two Novel Bacteroidota Strains Asinibacterium spp. OR43 and OR53
Abstract
:1. Introduction
2. Results and Discussion
2.1. Physiological Characterization
2.2. Growth in the Presence of Stress Factors
2.3. Growth of Asinibacterium sp. OR53 in the Presence of Uranium
2.4. Genomes of Asinibacterium spp. OR43 and OR53
3. Material and Methods
4. Conclusions
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Conflicts of Interest
References
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Gene Product Name | Gene Symbol | OR43 | OR53 |
---|---|---|---|
Nitrate/nitrite transporter | |||
Nitrite/nitrate transporter | narK | + | + |
ABC transporter | nrtABC | + | - |
Assimilatory nitrate reduction | |||
Ferredoxin nitrate reductase | narB | + | + |
Dissimilatory nitrate reduction | |||
Nitrite reductase | nirBD | + | + |
Denitrification | |||
Nitrate reductase | napAB | - | - |
Nitrite reductase (copper containing) | nirK | + | + |
Nitric oxide reductase (qNOR) | norC | + | + |
Nitrous oxide reductase | nosZLDFY | + | + |
Gene Product Name | Gene Symbol | OR43 | OR53 |
---|---|---|---|
F-type proton translocating ATPase | atpG | 1 | 1 |
atpCD | 1 | 1 | |
atpBEFHA | 1 | 1 | |
High affinity potassium transporter | kdpABCD | 1 | 1 |
Low affinity potassium transporter | kup | 2 | 2 |
Gene Product Name | Gene Symbol | OR43 | OR53 |
---|---|---|---|
Arsenic | |||
Arsenic resistance operon | arsBCR | 0 | 1 |
Arsenate reductase (protein-tyrosine phosphatase) | arsC | 1 | 1 |
Copper and silver | |||
Copper exporting P-type ATPase (Cu2+) | copAB | 1 | 1 |
Copper exporting P-type ATPase (Cu2+) | copA | 2 | 2 |
Copper exporting P-type ATPase (Cu2+) | copB | 2 | 2 |
Copper chaperone | copZ | 1 | 1 |
Copper homeostasis protein | cutC | 1 | 1 |
Cu(I)/Ag(I) efflux system operon | cusAB, silAB | 1 | 3 |
Copper two component regulatory systems | copRS, cusRS | 4 | 4 |
Cobalt, zinc, cadmium | |||
Cobalt–zinc–cadmium resistance operon | czcCBA | 2 | 1 |
Heavy metal efflux pump | czcA | 3 | 3 |
Membrane fusion protein | czcB | 2 | 2 |
Cation diffusion facilitator | czcD | 2 | 2 |
Cd2+/Zn2+ exporting ATPase | zntA | 1 | 1 |
Mercury | |||
Possible transcriptional regulator | merR | 2 | 2 |
Putative mercury transport protein | merT-P | 2 | 2 |
Mercury reductase | merA | 1 | 1 |
Mercury resistance protein | merC | 1 | 1 |
Zinc | |||
Cd2+/Zn2+ exporting ATPase | zntA | 1 | 1 |
Nickel | |||
Nickel transport operon | nikABCE | 1 | 1 |
Chromium | |||
Chromate transporter | chrA | 1 | 1 |
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Brzoska, R.M.; Edelmann, R.E.; Bollmann, A. Physiological and Genomic Characterization of Two Novel Bacteroidota Strains Asinibacterium spp. OR43 and OR53. Bacteria 2022, 1, 33-47. https://doi.org/10.3390/bacteria1010004
Brzoska RM, Edelmann RE, Bollmann A. Physiological and Genomic Characterization of Two Novel Bacteroidota Strains Asinibacterium spp. OR43 and OR53. Bacteria. 2022; 1(1):33-47. https://doi.org/10.3390/bacteria1010004
Chicago/Turabian StyleBrzoska, Ryann M., Richard E. Edelmann, and Annette Bollmann. 2022. "Physiological and Genomic Characterization of Two Novel Bacteroidota Strains Asinibacterium spp. OR43 and OR53" Bacteria 1, no. 1: 33-47. https://doi.org/10.3390/bacteria1010004