Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth
Abstract
1. Introduction
2. How Plants Recruit Beneficial Microbes and Exclude Pathogens
3. Plant Root Exudates
4. Overview of How Food Crop Root Exudates Facilitate Plant Biocontrol
Food Crop | Root Exudate | Affected Microbiome (↑ * or ↓ *) | Biocontrol/Outcome | Reference |
---|---|---|---|---|
Arabidopsis # | Malic acid | Bacillus subtilis FB17 ↑ | Pseudomonas syringae pv tomato | [80,81,82] |
Arabidopsis # | Amino acids and long-chain fatty acids | Pseudomonas sp. ↑ | Pseudomonas syringae pv tomato | [83] |
Barley | Phenolic compound | Pseudomonas fluorescens ↑ | Pythium ultimum | [84] |
Barley | Phenolic compounds | Beneficial rhizosphere community | Fusarium graminearum | [85,86] |
Bayberry | Humic acid | Mycobacterium and Crossiella ↑ Acidothermus, Bryobacter, Acidibacter Geminibasidium, and Mycena ↓ | Plant growth promotion and enhance disease resistance | [87] |
Carex | Volatile organic compound (Monoterpene (Z)-limonene-oxide) | Janthinobacterium, Collimonas, and Paenibacillus ↑ | Fusarium culmorum | [88] |
Pepper | L-Malic acid | B. subtilis GB03 ↑ | Aphids and Ralstonia solanacearum SL1931 control | [72,89] |
Cucumber | Fumaric acid and citric acid | Bacillus amyloliquefaciens ↑ | Fusarium oxysporum f. sp. Cucumerinum | [82] |
Ginseng | Organic acids, sugars, and amino acids | PGPB ↑ | Alternaria panax | [90] |
Maize | Benzoxazinoids | Flavobacteriaceae and Comamonadacea ↓ | Increased plant growth and disease resistance | [91] |
Maize | Sesquiterpene (E)-b-caryophyllene (Ebc) | Soil-borne entomopathogenic nematode ↑ | Diabrotica virgifera larvae | [92,93] |
Maize | Phenolic compounds | Acinetobacter calcoaceticus ↑ | Larvae of western corn rootworms | [94] |
Melon and watermelon | Cucurbitacins | Enterobacter and Bacillus ↑ | Increased resistance to fungal pathogens | [95] |
Canola | Trehalose, indolyl, glucosinolates, and sulfur | Gammaproteobacteria, Firmicutes, Bacillus, Paenibacillus, Pseudomonas, and Stenotrophomonas ↑ | Biocontrol of cabbage root fly (Delia radicum) | [96] |
Peanut | Ethylene | Actinobaterial species ↑ | Cassava (Manihot esculenta) | [97] |
Potato | Volatile compounds | Phytophthora infestans ↓ | Biotic and abiotic stress reduction | [98] |
Sorghum | Strigolactone | AMF colonization ↑ | Striga hermonthica | [99] |
Sweet wormwood | Artemisinin | Sphingomonas and Sphingobium ↑ | Enhanced plant environmental fitness | [100] |
Tomato | β-Aldehyde | Lysobacter sp. ↑ | Plant growth and defense enhancement | [101] |
Tomato | β-Caryophyllene | B. amyloliquefaciens ↑ and Pseudomonas aeruginosa ↓ | Disease reduction and plant growth-promotion | [102] |
Tomato | Strigolactone | AMF colonization ↑ | Meloidogyne incognita | [103] |
Tomato | Volatile organic compound | Bacillus sp. ↑ | Fusarium oxysporum | [104] |
Watermelon | Trans-chlorogenic acid, caffeic acid, and trans-cinnamic acid | PGPB ↑ | Fusarium oxysporum | [105] |
5. Bioengineering of Rhizospheric Soils for Disease Suppression
6. Conclusions and Future Perspectives
Funding
Data Availability Statement
Conflicts of Interest
References
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Ali, S.; Glick, B.R. Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth. Crops 2024, 4, 43-54. https://doi.org/10.3390/crops4010004
Ali S, Glick BR. Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth. Crops. 2024; 4(1):43-54. https://doi.org/10.3390/crops4010004
Chicago/Turabian StyleAli, Shimaila, and Bernard R. Glick. 2024. "Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth" Crops 4, no. 1: 43-54. https://doi.org/10.3390/crops4010004
APA StyleAli, S., & Glick, B. R. (2024). Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth. Crops, 4(1), 43-54. https://doi.org/10.3390/crops4010004